RNA–Protein interactions for RNA: ENST00000534602.5

GSDMD-216, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 480 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-216ENST00000534602 SNRNP48Q6IEG0 339 aaKnown RBP25.48■■□□□ 1.67
GSDMD-216ENST00000534602 CHD1LQ86WJ1 897 aa25.48■■□□□ 1.67
GSDMD-216ENST00000534602 ARRDC4Q8NCT1 418 aa25.48■■□□□ 1.67
GSDMD-216ENST00000534602 FAM227BQ96M60 508 aa25.48■■□□□ 1.67
GSDMD-216ENST00000534602 OSBPL3Q9H4L5 887 aa25.48■■□□□ 1.67
GSDMD-216ENST00000534602 SLC38A10Q9HBR0 1119 aa25.48■■□□□ 1.67
GSDMD-216ENST00000534602 ORC4O43929 436 aa25.47■■□□□ 1.67
GSDMD-216ENST00000534602 IGHDP01880 384 aa25.47■■□□□ 1.67
GSDMD-216ENST00000534602 PGK2P07205 417 aa25.47■■□□□ 1.67
GSDMD-216ENST00000534602 OAZ1P54368 228 aa25.47■■□□□ 1.67
GSDMD-216ENST00000534602 NUCB1Q02818 461 aa25.47■■□□□ 1.67
GSDMD-216ENST00000534602 CTDSPL2Q05D32 466 aa25.47■■□□□ 1.67
GSDMD-216ENST00000534602 B4GALNT3Q6L9W6 998 aa25.47■■□□□ 1.67
GSDMD-216ENST00000534602 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.47■■□□□ 1.67
GSDMD-216ENST00000534602 EXOC6Q8TAG9 804 aa25.47■■□□□ 1.67
GSDMD-216ENST00000534602 KIFC2Q96AC6 838 aa25.47■■□□□ 1.67
GSDMD-216ENST00000534602 GMCL1Q96IK5 515 aa25.47■■□□□ 1.67
GSDMD-216ENST00000534602 CTDP1Q9Y5B0 961 aaPredicted RBP25.47■■□□□ 1.67
GSDMD-216ENST00000534602 ZMYM6O95789 1325 aa25.46■■□□□ 1.67
GSDMD-216ENST00000534602 A0A0D9SFI3 127 aa25.46■■□□□ 1.67
GSDMD-216ENST00000534602 TSPY2A6NKD2 308 aa25.46■■□□□ 1.67
GSDMD-216ENST00000534602 BMP8BP34820 402 aa25.46■■□□□ 1.67
GSDMD-216ENST00000534602 MSL3Q8N5Y2 521 aaKnown RBP25.46■■□□□ 1.67
GSDMD-216ENST00000534602 TINF2Q9BSI4 451 aa25.46■■□□□ 1.67
GSDMD-216ENST00000534602 TRIM6-TRIM34B2RNG4 842 aa25.45■■□□□ 1.66
GSDMD-216ENST00000534602 FGAP02671 866 aa25.45■■□□□ 1.66
GSDMD-216ENST00000534602 NOVP48745 357 aa25.45■■□□□ 1.66
GSDMD-216ENST00000534602 LRRC26Q2I0M4 334 aa25.45■■□□□ 1.66
GSDMD-216ENST00000534602 PLEKHM2Q8IWE5 1019 aa25.45■■□□□ 1.66
GSDMD-216ENST00000534602 GDF15Q99988 308 aa25.45■■□□□ 1.66
GSDMD-216ENST00000534602 IL17RBQ9NRM6 502 aa25.45■■□□□ 1.66
GSDMD-216ENST00000534602 RIPK3Q9Y572 518 aa25.45■■□□□ 1.66
GSDMD-216ENST00000534602 PLA2G6O60733 806 aa25.44■■□□□ 1.66
GSDMD-216ENST00000534602 HSPD1P10809 573 aaKnown RBP25.44■■□□□ 1.66
GSDMD-216ENST00000534602 NMIQ13287 307 aaPredicted RBP25.44■■□□□ 1.66
GSDMD-216ENST00000534602 PRAMEF19Q5SWL8 479 aa25.44■■□□□ 1.66
GSDMD-216ENST00000534602 FAM160B2Q86V87 743 aa25.44■■□□□ 1.66
GSDMD-216ENST00000534602 CPXCR1Q8N123 301 aa25.44■■□□□ 1.66
GSDMD-216ENST00000534602 CHURC1Q8WUH1 139 aa25.44■■□□□ 1.66
GSDMD-216ENST00000534602 SENP6Q9GZR1 1112 aaPredicted RBP25.44■■□□□ 1.66
GSDMD-216ENST00000534602 FBXO40Q9UH90 709 aa25.44■■□□□ 1.66
GSDMD-216ENST00000534602 ZMYND8Q9ULU4 1186 aaPredicted RBP25.44■■□□□ 1.66
GSDMD-216ENST00000534602 STX8Q9UNK0 236 aa25.44■■□□□ 1.66
GSDMD-216ENST00000534602 PLXNA1Q9UIW2 1896 aa25.43■■□□□ 1.66
GSDMD-216ENST00000534602 DNAJC25-GNG10A0A024R161 153 aa25.43■■□□□ 1.66
GSDMD-216ENST00000534602 RANBP6O60518 1105 aaKnown RBP25.43■■□□□ 1.66
GSDMD-216ENST00000534602 SLC1A4P43007 532 aa25.43■■□□□ 1.66
GSDMD-216ENST00000534602 STAT2P52630 851 aa25.43■■□□□ 1.66
GSDMD-216ENST00000534602 MFAP1P55081 439 aaKnown RBP25.43■■□□□ 1.66
GSDMD-216ENST00000534602 CHST13Q8NET6 341 aa25.43■■□□□ 1.66
GSDMD-216ENST00000534602 STAG1Q8WVM7 1258 aa25.43■■□□□ 1.66
GSDMD-216ENST00000534602 RILPL2Q969X0 211 aa25.43■■□□□ 1.66
GSDMD-216ENST00000534602 DDX11Q96FC9 970 aa25.43■■□□□ 1.66
GSDMD-216ENST00000534602 INCENPQ9NQS7 918 aa25.43■■□□□ 1.66
GSDMD-216ENST00000534602 CCDC171Q6TFL3 1326 aa25.42■■□□□ 1.66
GSDMD-216ENST00000534602 TMEM232C9JQI7 657 aa25.42■■□□□ 1.66
GSDMD-216ENST00000534602 RAVER2Q9HCJ3 691 aaKnown RBP25.42■■□□□ 1.66
GSDMD-216ENST00000534602 TACC3Q9Y6A5 838 aa25.42■■□□□ 1.66
GSDMD-216ENST00000534602 KBTBD13C9JR72 458 aa25.41■■□□□ 1.66
GSDMD-216ENST00000534602 PCP11498 1178 aaKnown RBP25.41■■□□□ 1.66
GSDMD-216ENST00000534602 SDSP20132 328 aa25.41■■□□□ 1.66
GSDMD-216ENST00000534602 GJC2Q5T442 439 aaPredicted RBP25.41■■□□□ 1.66
GSDMD-216ENST00000534602 RCSD1Q6JBY9 416 aa25.41■■□□□ 1.66
GSDMD-216ENST00000534602 MAMDC4Q6UXC1 1216 aa25.41■■□□□ 1.66
GSDMD-216ENST00000534602 ZNF467Q7Z7K2 595 aaPredicted RBP25.41■■□□□ 1.66
GSDMD-216ENST00000534602 ZNF589Q86UQ0 364 aaPredicted RBP25.41■■□□□ 1.66
GSDMD-216ENST00000534602 SYNGAP1Q96PV0 1343 aa25.4■■□□□ 1.66
GSDMD-216ENST00000534602 NMT2O60551 498 aa25.4■■□□□ 1.66
GSDMD-216ENST00000534602 SYN1P17600 705 aa25.4■■□□□ 1.66
GSDMD-216ENST00000534602 MCCP23508 829 aa25.4■■□□□ 1.66
GSDMD-216ENST00000534602 TCP11L1Q9NUJ3 509 aa25.4■■□□□ 1.66
GSDMD-216ENST00000534602 CNPY2Q9Y2B0 182 aa25.4■■□□□ 1.66
GSDMD-216ENST00000534602 ZNF865P0CJ78 1059 aaPredicted RBP25.39■■□□□ 1.66
GSDMD-216ENST00000534602 RARBP10826 455 aa25.39■■□□□ 1.66
GSDMD-216ENST00000534602 ANO1Q5XXA6 986 aa25.39■■□□□ 1.66
GSDMD-216ENST00000534602 DNAH12Q6ZR08 3092 aa25.39■■□□□ 1.65
GSDMD-216ENST00000534602 MAGEA10P43363 369 aaPredicted RBP25.38■■□□□ 1.65
GSDMD-216ENST00000534602 SLC4A3P48751 1232 aa25.38■■□□□ 1.65
GSDMD-216ENST00000534602 LRRC41Q15345 812 aa25.38■■□□□ 1.65
GSDMD-216ENST00000534602 ANKRD35Q8N283 1001 aa25.38■■□□□ 1.65
GSDMD-216ENST00000534602 ISY1Q9ULR0 285 aaKnown RBP25.38■■□□□ 1.65
GSDMD-216ENST00000534602 HIP1O00291 1037 aa25.37■■□□□ 1.65
GSDMD-216ENST00000534602 AKR1A1P14550 325 aa25.37■■□□□ 1.65
GSDMD-216ENST00000534602 IKQ13123 557 aaPredicted RBP25.37■■□□□ 1.65
GSDMD-216ENST00000534602 TKFCQ3LXA3 575 aa25.37■■□□□ 1.65
GSDMD-216ENST00000534602 DCAF4Q8WV16 495 aa25.37■■□□□ 1.65
GSDMD-216ENST00000534602 XPNPEP3Q9NQH7 507 aa25.37■■□□□ 1.65
GSDMD-216ENST00000534602 TOMM22Q9NS69 142 aa25.37■■□□□ 1.65
GSDMD-216ENST00000534602 SUPT16HQ9Y5B9 1047 aaKnown RBP25.37■■□□□ 1.65
GSDMD-216ENST00000534602 SMCHD1A6NHR9 2005 aa25.37■■□□□ 1.65
GSDMD-216ENST00000534602 TAL1P17542 331 aaPredicted RBP25.36■■□□□ 1.65
GSDMD-216ENST00000534602 NT5C2P49902 561 aa25.36■■□□□ 1.65
GSDMD-216ENST00000534602 ATN1P54259 1190 aaPredicted RBP25.36■■□□□ 1.65
GSDMD-216ENST00000534602 AKNAD1Q5T1N1 836 aa25.36■■□□□ 1.65
GSDMD-216ENST00000534602 SLC39A5Q6ZMH5 540 aa25.36■■□□□ 1.65
GSDMD-216ENST00000534602 KCTD1Q719H9 257 aa25.36■■□□□ 1.65
GSDMD-216ENST00000534602 ACAD9Q9H845 621 aa25.36■■□□□ 1.65
GSDMD-216ENST00000534602 ZNF536O15090 1300 aa25.36■■□□□ 1.65
GSDMD-216ENST00000534602 SNAI1O95863 264 aaPredicted RBP25.35■■□□□ 1.65
GSDMD-216ENST00000534602 TOP1P11387 765 aaKnown RBP25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms