RNA–Protein interactions for RNA: ENST00000534348.5

NEDD8-MDP1-202, Transcript of NEDD8-MDP1 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NEDD8-MDP1, Length 595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-202ENST00000534348 BEX3Q00994 111 aa12.5□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 MB21D1Q8N884 522 aa12.5□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.5□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 UBE2ZQ9H832 354 aaPredicted RBP12.5□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 SERPINB13Q9UIV8 391 aa12.5□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 BRWD1Q9NSI6 2320 aa12.5□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 SPTBN4Q9H254 2564 aa12.5□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 A0A0G2JMZ2 1700 aa12.49□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 ROBO3Q96MS0 1386 aa12.49□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 LPXNO60711 386 aa12.49□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 SNAI1O95863 264 aaPredicted RBP12.49□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 MCAMP43121 646 aa12.49□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 USP5P45974 858 aa12.49□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 PPP4CP60510 307 aa12.49□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 PTCRAQ6ISU1 281 aaPredicted RBP12.49□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 CXCL17Q6UXB2 119 aa12.49□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 GDPD5Q8WTR4 605 aa12.49□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 VWCEQ96DN2 955 aa12.49□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 NOC4LQ9BVI4 516 aaKnown RBP12.49□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 PRKRIP1Q9H875 184 aaPredicted RBP12.49□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 MTUS1Q9ULD2 1270 aa12.49□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 AKAP2Q9Y2D5 859 aa12.49□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 CDK5RAP2Q96SN8 1893 aa12.48□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 SLC25A27O95847 323 aa12.48□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 UBTFL1P0CB47 393 aaPredicted RBP12.48□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 SLC4A3P48751 1232 aa12.48□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 FOXK2Q01167 660 aa12.48□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 WDR63Q8IWG1 891 aa12.48□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 DIS3Q9Y2L1 958 aaKnown RBP12.48□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 ZNFX1Q9P2E3 1918 aaKnown RBP12.47□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 ZNF536O15090 1300 aa12.47□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 B4GALT4O60513 344 aa12.47□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 CST5P28325 142 aaPredicted RBP12.47□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 SHMT1P34896 483 aa12.47□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 ACVR2BQ13705 512 aa12.47□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 CCDC144BQ3MJ40 725 aa12.47□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 LEXMQ3ZCV2 418 aa12.47□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 IER5LQ5T953 404 aa12.47□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 NOL8Q76FK4 1167 aaKnown RBP12.47□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 MRPL50Q8N5N7 158 aaKnown RBP12.47□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 MIGA1Q8NAN2 632 aa12.47□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 PRSS33Q8NF86 280 aa12.47□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 MFSD14AQ96MC6 490 aa12.47□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 POTEB3A0JP26 581 aa12.46□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 KIF28PB7ZC32 967 aa12.46□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 GFRA3O60609 400 aa12.46□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 ARID4AP29374 1257 aaPredicted RBP12.46□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 STAT3P40763 770 aa12.46□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 PLCD1P51178 756 aa12.46□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 GJA9P57773 515 aa12.46□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 PSMC6P62333 389 aa12.46□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 ITGA7Q13683 1181 aa12.46□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 CCDC184Q52MB2 194 aa12.46□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 POTEBQ6S5H4 581 aa12.46□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 CLEC10AQ8IUN9 316 aa12.46□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 DDX11Q96FC9 970 aa12.46□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 COPRSQ9NQ92 184 aa12.46□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 FBXO28Q9NVF7 368 aa12.46□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 FAM86C1Q9NVL1 165 aa12.46□□□□□ -0.41
NEDD8-MDP1-202ENST00000534348 GRIN2DO15399 1336 aa12.45□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.45□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 LCHNA4D1U4 455 aa12.45□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 H3BQ06 376 aaPredicted RBP12.45□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 RAD21O60216 631 aa12.45□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 CYP2C9P11712 490 aa12.45□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 CYP7A1P22680 504 aa12.45□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 PTGS1P23219 599 aa12.45□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 EP400NLQ6ZTU2 488 aa12.45□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 TMCO2Q7Z6W1 182 aaPredicted RBP12.45□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 TTC6Q86TZ1 520 aa12.45□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 RIOX2Q8IUF8 465 aa12.45□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 HERC6Q8IVU3 1022 aa12.45□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 AGBL1Q96MI9 1066 aa12.45□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 PTPRCP08575 1304 aa12.44□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 GRXCR2A6NFK2 248 aa12.44□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 CTAGE5O15320 804 aa12.44□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 ACTN1P12814 892 aa12.44□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 EVX2Q03828 476 aa12.44□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 SLC43A3Q8NBI5 491 aa12.44□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 SLC9A7Q96T83 725 aa12.44□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 FTOQ9C0B1 505 aaKnown RBP eCLIP12.44□□□□□ -0.427e-7■■□□□ 13.4
NEDD8-MDP1-202ENST00000534348 UPF3AQ9H1J1 476 aaKnown RBP12.44□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 EHD4Q9H223 541 aa12.44□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.44□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 ZNF318Q5VUA4 2279 aa12.44□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.43□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 CYP2E1P05181 493 aaPredicted RBP12.43□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 POLR3DP05423 398 aaPredicted RBP12.43□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 UQCRFS1P1P0C7P4 283 aa12.43□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 PTPN5P54829 565 aa12.43□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 TTC39AQ5SRH9 613 aa12.43□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 TRMT13Q9NUP7 481 aaKnown RBP12.43□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 MYO15AQ9UKN7 3530 aa12.42□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 VWA5AO00534 786 aa12.42□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 MAMDC4Q6UXC1 1216 aa12.42□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 MSL3Q8N5Y2 521 aaKnown RBP12.42□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 PHOSPHO2Q8TCD6 241 aa12.42□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 ZBED2Q9BTP6 218 aa12.42□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 ABHD16BQ9H3Z7 469 aa12.42□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 SUGCTQ9HAC7 445 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms