RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 IL23AQ9NPF7 189 aa8.02□□□□□ -1.13
CD44-237ENST00000534082 PCDHA11Q9Y5I1 949 aa8.02□□□□□ -1.13
CD44-237ENST00000534082 MROH7Q68CQ1 1323 aa8.02□□□□□ -1.13
CD44-237ENST00000534082 ZNF318Q5VUA4 2279 aa8.01□□□□□ -1.13
CD44-237ENST00000534082 MYO15AQ9UKN7 3530 aa8.01□□□□□ -1.13
CD44-237ENST00000534082 EYA2O00167 538 aa8.01□□□□□ -1.13
CD44-237ENST00000534082 STRNO43815 780 aa8.01□□□□□ -1.13
CD44-237ENST00000534082 ADAMTS4O75173 837 aa8.01□□□□□ -1.13
CD44-237ENST00000534082 MAP4K4O95819 1239 aaPredicted RBP8.01□□□□□ -1.13
CD44-237ENST00000534082 FGBP02675 491 aa8.01□□□□□ -1.13
CD44-237ENST00000534082 ALADP13716 330 aa8.01□□□□□ -1.13
CD44-237ENST00000534082 VCAM1P19320 739 aa8.01□□□□□ -1.13
CD44-237ENST00000534082 SSTR3P32745 418 aaPredicted RBP8.01□□□□□ -1.13
CD44-237ENST00000534082 MECOMQ03112 1051 aa8.01□□□□□ -1.13
CD44-237ENST00000534082 SLC4A10Q6U841 1118 aa8.01□□□□□ -1.13
CD44-237ENST00000534082 CATSPERGQ6ZRH7 1159 aa8.01□□□□□ -1.13
CD44-237ENST00000534082 OTOP2Q7RTS6 562 aa8.01□□□□□ -1.13
CD44-237ENST00000534082 LAPTM4BQ86VI4 370 aa8.01□□□□□ -1.13
CD44-237ENST00000534082 TEX11Q8IYF3 940 aa8.01□□□□□ -1.13
CD44-237ENST00000534082 ZNF384Q8TF68 577 aa8.01□□□□□ -1.13
CD44-237ENST00000534082 MAML3Q96JK9 1138 aa8.01□□□□□ -1.13
CD44-237ENST00000534082 ZFRQ96KR1 1074 aaKnown RBP8.01□□□□□ -1.13
CD44-237ENST00000534082 TSEN34Q9BSV6 310 aaKnown RBP8.01□□□□□ -1.13
CD44-237ENST00000534082 MOV10L1Q9BXT6 1211 aaKnown RBP8.01□□□□□ -1.13
CD44-237ENST00000534082 CERS4Q9HA82 394 aa8.01□□□□□ -1.13
CD44-237ENST00000534082 GINM1Q9NU53 330 aa8.01□□□□□ -1.13
CD44-237ENST00000534082 SLC5A4Q9NY91 659 aa8.01□□□□□ -1.13
CD44-237ENST00000534082 PI4KBQ9UBF8 816 aa8.01□□□□□ -1.13
CD44-237ENST00000534082 NRBP1Q9UHY1 535 aa8.01□□□□□ -1.13
CD44-237ENST00000534082 SYNRGQ9UMZ2 1314 aa8.01□□□□□ -1.13
CD44-237ENST00000534082 CACNA1FO60840 1977 aa8.01□□□□□ -1.13
CD44-237ENST00000534082 BRWD1Q9NSI6 2320 aa8□□□□□ -1.13
CD44-237ENST00000534082 MOXD2PA6NHM9 499 aa8□□□□□ -1.13
CD44-237ENST00000534082 EPOPA6NHQ4 379 aa8□□□□□ -1.13
CD44-237ENST00000534082 CA3P07451 260 aa8□□□□□ -1.13
CD44-237ENST00000534082 CYP2C18P33260 490 aa8□□□□□ -1.13
CD44-237ENST00000534082 RASGRF1Q13972 1273 aa8□□□□□ -1.13
CD44-237ENST00000534082 SPTY2D1Q68D10 685 aaPredicted RBP8□□□□□ -1.13
CD44-237ENST00000534082 PACS2Q86VP3 889 aa8□□□□□ -1.13
CD44-237ENST00000534082 FAM178BQ8IXR5 827 aa8□□□□□ -1.13
CD44-237ENST00000534082 TRIM34Q9BYJ4 488 aa8□□□□□ -1.13
CD44-237ENST00000534082 SLC4A7Q9Y6M7 1214 aa8□□□□□ -1.13
CD44-237ENST00000534082 PDS5AQ29RF7 1337 aaKnown RBP8□□□□□ -1.13
CD44-237ENST00000534082 SPTBN4Q9H254 2564 aa7.99□□□□□ -1.13
CD44-237ENST00000534082 SMAPO00193 183 aa7.99□□□□□ -1.13
CD44-237ENST00000534082 DCXO43602 365 aa7.99□□□□□ -1.13
CD44-237ENST00000534082 GH2P01242 217 aa7.99□□□□□ -1.13
CD44-237ENST00000534082 AKR1A1P14550 325 aa7.99□□□□□ -1.13
CD44-237ENST00000534082 TAL1P17542 331 aaPredicted RBP7.99□□□□□ -1.13
CD44-237ENST00000534082 ERCC3P19447 782 aa7.99□□□□□ -1.13
CD44-237ENST00000534082 CDK7P50613 346 aa7.99□□□□□ -1.13
CD44-237ENST00000534082 USP14P54578 494 aa7.99□□□□□ -1.13
CD44-237ENST00000534082 CCDC102BQ68D86 513 aa7.99□□□□□ -1.13
CD44-237ENST00000534082 ERICH6Q7L0X2 663 aa7.99□□□□□ -1.13
CD44-237ENST00000534082 ATG9AQ7Z3C6 839 aa7.99□□□□□ -1.13
CD44-237ENST00000534082 FAM126BQ8IXS8 530 aa7.99□□□□□ -1.13
CD44-237ENST00000534082 ABRAQ8N0Z2 381 aa7.99□□□□□ -1.13
CD44-237ENST00000534082 CRACR2BQ8N4Y2 399 aaPredicted RBP7.99□□□□□ -1.13
CD44-237ENST00000534082 SHCBP1Q8NEM2 672 aa7.99□□□□□ -1.13
CD44-237ENST00000534082 ARNTL2Q8WYA1 636 aa7.99□□□□□ -1.13
CD44-237ENST00000534082 ANKS1AQ92625 1134 aa7.99□□□□□ -1.13
CD44-237ENST00000534082 CDCA7LQ96GN5 454 aa7.99□□□□□ -1.13
CD44-237ENST00000534082 GLT1D1Q96MS3 346 aa7.99□□□□□ -1.13
CD44-237ENST00000534082 SPATC1LQ9H0A9 340 aa7.99□□□□□ -1.13
CD44-237ENST00000534082 DHX36Q9H2U1 1008 aaKnown RBP7.99□□□□□ -1.13
CD44-237ENST00000534082 CDHR5Q9HBB8 845 aa7.99□□□□□ -1.13
CD44-237ENST00000534082 ELP1O95163 1332 aa7.99□□□□□ -1.13
CD44-237ENST00000534082 FANCIQ9NVI1 1328 aa7.99□□□□□ -1.13
CD44-237ENST00000534082 ZFHX4Q86UP3 3567 aa7.99□□□□□ -1.13
CD44-237ENST00000534082 COL4A4P53420 1690 aaPredicted RBP7.98□□□□□ -1.13
CD44-237ENST00000534082 DCHS1Q96JQ0 3298 aa7.98□□□□□ -1.13
CD44-237ENST00000534082 MYADML2A6NDP7 307 aa7.98□□□□□ -1.13
CD44-237ENST00000534082 SOWAHBA6NEL2 793 aa7.98□□□□□ -1.13
CD44-237ENST00000534082 ZBBXA8MT70 800 aa7.98□□□□□ -1.13
CD44-237ENST00000534082 TLR3O15455 904 aaKnown RBP7.98□□□□□ -1.13
CD44-237ENST00000534082 ATP2A2P16615 1042 aaKnown RBP7.98□□□□□ -1.13
CD44-237ENST00000534082 ADORA1P30542 326 aa7.98□□□□□ -1.13
CD44-237ENST00000534082 RFX5P48382 616 aaPredicted RBP7.98□□□□□ -1.13
CD44-237ENST00000534082 GSTO1P78417 241 aa7.98□□□□□ -1.13
CD44-237ENST00000534082 GRB10Q13322 594 aa7.98□□□□□ -1.13
CD44-237ENST00000534082 KCNA10Q16322 511 aa7.98□□□□□ -1.13
CD44-237ENST00000534082 TMEM67Q5HYA8 995 aa7.98□□□□□ -1.13
CD44-237ENST00000534082 HFE2Q6ZVN8 426 aa7.98□□□□□ -1.13
CD44-237ENST00000534082 METTL16Q86W50 562 aaKnown RBP7.98□□□□□ -1.13
CD44-237ENST00000534082 NCAPG2Q86XI2 1143 aa7.98□□□□□ -1.13
CD44-237ENST00000534082 KLHDC9Q8NEP7 349 aa7.98□□□□□ -1.13
CD44-237ENST00000534082 KCNV2Q8TDN2 545 aa7.98□□□□□ -1.13
CD44-237ENST00000534082 SH3RF3Q8TEJ3 882 aaPredicted RBP7.98□□□□□ -1.13
CD44-237ENST00000534082 KIAA1683Q9H0B3 1180 aa7.98□□□□□ -1.13
CD44-237ENST00000534082 RPAP3Q9H6T3 665 aaPredicted RBP7.98□□□□□ -1.13
CD44-237ENST00000534082 UBE2ZQ9H832 354 aaPredicted RBP7.98□□□□□ -1.13
CD44-237ENST00000534082 UMODL1Q5DID0 1318 aa7.98□□□□□ -1.13
CD44-237ENST00000534082 A0A0U1RQG5 324 aaPredicted RBP7.97□□□□□ -1.13
CD44-237ENST00000534082 ARVCFO00192 962 aa7.97□□□□□ -1.13
CD44-237ENST00000534082 GFRA3O60609 400 aa7.97□□□□□ -1.13
CD44-237ENST00000534082 VAMP4O75379 141 aa7.97□□□□□ -1.13
CD44-237ENST00000534082 ARHGEF15O94989 841 aa7.97□□□□□ -1.13
CD44-237ENST00000534082 LDHCP07864 332 aa7.97□□□□□ -1.13
CD44-237ENST00000534082 ZNF865P0CJ78 1059 aaPredicted RBP7.97□□□□□ -1.13
CD44-237ENST00000534082 IL9P15248 144 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms