RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 DDX11Q96FC9 970 aa22.44■■□□□ 1.18
LRRK1-210ENST00000534045 MTMR7Q9Y216 660 aa22.44■■□□□ 1.18
LRRK1-210ENST00000534045 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.44■■□□□ 1.18
LRRK1-210ENST00000534045 MKI67P46013 3256 aaKnown RBP22.43■■□□□ 1.18
LRRK1-210ENST00000534045 PLIN4Q96Q06 1357 aa22.43■■□□□ 1.18
LRRK1-210ENST00000534045 TMEM232C9JQI7 657 aa22.43■■□□□ 1.18
LRRK1-210ENST00000534045 FDX1P10109 184 aa22.43■■□□□ 1.18
LRRK1-210ENST00000534045 MCCP23508 829 aa22.43■■□□□ 1.18
LRRK1-210ENST00000534045 MFSD6Q6ZSS7 791 aa22.43■■□□□ 1.18
LRRK1-210ENST00000534045 ZNF589Q86UQ0 364 aaPredicted RBP22.43■■□□□ 1.18
LRRK1-210ENST00000534045 DDX20Q9UHI6 824 aaKnown RBP22.43■■□□□ 1.18
LRRK1-210ENST00000534045 ZNF214Q9UL59 606 aaPredicted RBP22.43■■□□□ 1.18
LRRK1-210ENST00000534045 ORC4O43929 436 aa22.42■■□□□ 1.18
LRRK1-210ENST00000534045 STAT2P52630 851 aa22.42■■□□□ 1.18
LRRK1-210ENST00000534045 HAND2P61296 217 aa22.42■■□□□ 1.18
LRRK1-210ENST00000534045 LHX8Q68G74 356 aa22.42■■□□□ 1.18
LRRK1-210ENST00000534045 FAM160B2Q86V87 743 aa22.42■■□□□ 1.18
LRRK1-210ENST00000534045 RNF41Q9H4P4 317 aaPredicted RBP22.42■■□□□ 1.18
LRRK1-210ENST00000534045 RAVER2Q9HCJ3 691 aaKnown RBP22.42■■□□□ 1.18
LRRK1-210ENST00000534045 ZNF236Q9UL36 1845 aa22.42■■□□□ 1.18
LRRK1-210ENST00000534045 ZNF213O14771 459 aa22.41■■□□□ 1.18
LRRK1-210ENST00000534045 NMT2O60551 498 aa22.41■■□□□ 1.18
LRRK1-210ENST00000534045 PGK2P07205 417 aa22.41■■□□□ 1.18
LRRK1-210ENST00000534045 HABP4Q5JVS0 413 aaKnown RBP22.41■■□□□ 1.18
LRRK1-210ENST00000534045 REPS2Q8NFH8 660 aa22.41■■□□□ 1.18
LRRK1-210ENST00000534045 STAG1Q8WVM7 1258 aa22.41■■□□□ 1.18
LRRK1-210ENST00000534045 GMCL1Q96IK5 515 aa22.41■■□□□ 1.18
LRRK1-210ENST00000534045 MAML3Q96JK9 1138 aa22.41■■□□□ 1.18
LRRK1-210ENST00000534045 IL17RBQ9NRM6 502 aa22.41■■□□□ 1.18
LRRK1-210ENST00000534045 FRMPD3Q5JV73 1810 aa22.41■■□□□ 1.18
LRRK1-210ENST00000534045 ZNFX1Q9P2E3 1918 aaKnown RBP22.4■■□□□ 1.18
LRRK1-210ENST00000534045 PCP11498 1178 aaKnown RBP22.4■■□□□ 1.18
LRRK1-210ENST00000534045 RCSD1Q6JBY9 416 aa22.4■■□□□ 1.18
LRRK1-210ENST00000534045 SLC38A10Q9HBR0 1119 aa22.4■■□□□ 1.18
LRRK1-210ENST00000534045 FBXO40Q9UH90 709 aa22.4■■□□□ 1.18
LRRK1-210ENST00000534045 DIS3Q9Y2L1 958 aaKnown RBP22.4■■□□□ 1.18
LRRK1-210ENST00000534045 ATP2A1O14983 1001 aa22.39■■□□□ 1.17
LRRK1-210ENST00000534045 MYCNP04198 464 aaPredicted RBP22.39■■□□□ 1.17
LRRK1-210ENST00000534045 FGRP09769 529 aa22.39■■□□□ 1.17
LRRK1-210ENST00000534045 CCDC96Q2M329 555 aa22.39■■□□□ 1.17
LRRK1-210ENST00000534045 AKNAD1Q5T1N1 836 aa22.39■■□□□ 1.17
LRRK1-210ENST00000534045 ANKRD35Q8N283 1001 aa22.39■■□□□ 1.17
LRRK1-210ENST00000534045 ARRDC4Q8NCT1 418 aa22.39■■□□□ 1.17
LRRK1-210ENST00000534045 COLQQ9Y215 455 aaPredicted RBP22.39■■□□□ 1.17
LRRK1-210ENST00000534045 ZMYM6O95789 1325 aa22.38■■□□□ 1.17
LRRK1-210ENST00000534045 CYBAP13498 195 aa22.38■■□□□ 1.17
LRRK1-210ENST00000534045 OAZ1P54368 228 aa22.38■■□□□ 1.17
LRRK1-210ENST00000534045 PRAMEF19Q5SWL8 479 aa22.38■■□□□ 1.17
LRRK1-210ENST00000534045 CHRDL2Q6WN34 429 aa22.38■■□□□ 1.17
LRRK1-210ENST00000534045 KCTD1Q719H9 257 aa22.38■■□□□ 1.17
LRRK1-210ENST00000534045 CHST13Q8NET6 341 aa22.38■■□□□ 1.17
LRRK1-210ENST00000534045 ESR2Q92731 530 aa22.38■■□□□ 1.17
LRRK1-210ENST00000534045 TINF2Q9BSI4 451 aa22.38■■□□□ 1.17
LRRK1-210ENST00000534045 CTNNA3Q9UI47 895 aa22.38■■□□□ 1.17
LRRK1-210ENST00000534045 RIPK3Q9Y572 518 aa22.38■■□□□ 1.17
LRRK1-210ENST00000534045 PLXNA1Q9UIW2 1896 aa22.37■■□□□ 1.17
LRRK1-210ENST00000534045 SEPT4O43236 478 aa22.37■■□□□ 1.17
LRRK1-210ENST00000534045 TOP1P11387 765 aaKnown RBP22.37■■□□□ 1.17
LRRK1-210ENST00000534045 ZNF792Q3KQV3 632 aa22.37■■□□□ 1.17
LRRK1-210ENST00000534045 C7orf61Q8IZ16 206 aa22.37■■□□□ 1.17
LRRK1-210ENST00000534045 TRPV1Q8NER1 839 aa22.37■■□□□ 1.17
LRRK1-210ENST00000534045 TCP11L1Q9NUJ3 509 aa22.37■■□□□ 1.17
LRRK1-210ENST00000534045 CNPY2Q9Y2B0 182 aa22.37■■□□□ 1.17
LRRK1-210ENST00000534045 LAMA4Q16363 1823 aa22.36■■□□□ 1.17
LRRK1-210ENST00000534045 MNX1P50219 401 aaPredicted RBP22.36■■□□□ 1.17
LRRK1-210ENST00000534045 IMMTQ16891 758 aaKnown RBP22.36■■□□□ 1.17
LRRK1-210ENST00000534045 ANO1Q5XXA6 986 aa22.36■■□□□ 1.17
LRRK1-210ENST00000534045 DCAF4Q8WV16 495 aa22.36■■□□□ 1.17
LRRK1-210ENST00000534045 TTC14Q96N46 770 aa22.36■■□□□ 1.17
LRRK1-210ENST00000534045 SENP6Q9GZR1 1112 aaPredicted RBP22.36■■□□□ 1.17
LRRK1-210ENST00000534045 HOMER2Q9NSB8 354 aa22.36■■□□□ 1.17
LRRK1-210ENST00000534045 NRBP1Q9UHY1 535 aa22.36■■□□□ 1.17
LRRK1-210ENST00000534045 TACC3Q9Y6A5 838 aa22.36■■□□□ 1.17
LRRK1-210ENST00000534045 CEP290O15078 2479 aa22.35■■□□□ 1.17
LRRK1-210ENST00000534045 PLA2G6O60733 806 aa22.35■■□□□ 1.17
LRRK1-210ENST00000534045 TTC22Q5TAA0 569 aa22.35■■□□□ 1.17
LRRK1-210ENST00000534045 RUFY2Q8WXA3 655 aa22.35■■□□□ 1.17
LRRK1-210ENST00000534045 KBTBD13C9JR72 458 aa22.34■■□□□ 1.17
LRRK1-210ENST00000534045 DNM1LO00429 736 aa22.34■■□□□ 1.17
LRRK1-210ENST00000534045 SLC34A2O95436 690 aa22.34■■□□□ 1.17
LRRK1-210ENST00000534045 IGHA2P01877 340 aa22.34■■□□□ 1.17
LRRK1-210ENST00000534045 CCDC178Q5BJE1 867 aa22.34■■□□□ 1.17
LRRK1-210ENST00000534045 CCDC174Q6PII3 467 aa22.34■■□□□ 1.17
LRRK1-210ENST00000534045 IQCA1Q86XH1 822 aa22.34■■□□□ 1.17
LRRK1-210ENST00000534045 TMEM47Q9BQJ4 181 aa22.34■■□□□ 1.17
LRRK1-210ENST00000534045 DSCC1Q9BVC3 393 aa22.34■■□□□ 1.17
LRRK1-210ENST00000534045 RARBP10826 455 aa22.33■■□□□ 1.17
LRRK1-210ENST00000534045 ALAS1P13196 640 aa22.33■■□□□ 1.17
LRRK1-210ENST00000534045 PDE4AP27815 886 aa22.33■■□□□ 1.17
LRRK1-210ENST00000534045 NT5C2P49902 561 aa22.33■■□□□ 1.17
LRRK1-210ENST00000534045 TKFCQ3LXA3 575 aa22.33■■□□□ 1.17
LRRK1-210ENST00000534045 GJC2Q5T442 439 aaPredicted RBP22.33■■□□□ 1.17
LRRK1-210ENST00000534045 MSL3Q8N5Y2 521 aaKnown RBP22.33■■□□□ 1.17
LRRK1-210ENST00000534045 ACAD9Q9H845 621 aa22.33■■□□□ 1.17
LRRK1-210ENST00000534045 PRR12Q9ULL5 1215 aa22.33■■□□□ 1.17
LRRK1-210ENST00000534045 COL6A1P12109 1028 aa22.32■■□□□ 1.16
LRRK1-210ENST00000534045 TBC1D10CQ8IV04 446 aa22.32■■□□□ 1.16
LRRK1-210ENST00000534045 AGBL1Q96MI9 1066 aa22.32■■□□□ 1.16
LRRK1-210ENST00000534045 TRERF1Q96PN7 1200 aa22.32■■□□□ 1.16
LRRK1-210ENST00000534045 GPCPD1Q9NPB8 672 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms