RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 BIN2Q9UBW5 565 aaPredicted RBP15.73■□□□□ 0.11
CMTM1-219ENST00000533953 ZNF214Q9UL59 606 aaPredicted RBP15.73■□□□□ 0.11
CMTM1-219ENST00000533953 PRR12Q9ULL5 1215 aa15.73■□□□□ 0.11
CMTM1-219ENST00000533953 RLFQ13129 1914 aa15.72■□□□□ 0.11
CMTM1-219ENST00000533953 IFIT3O14879 490 aaKnown RBP15.72■□□□□ 0.11
CMTM1-219ENST00000533953 ZBED4O75132 1171 aa15.72■□□□□ 0.11
CMTM1-219ENST00000533953 PTPREP23469 700 aa15.72■□□□□ 0.11
CMTM1-219ENST00000533953 PRMT2P55345 433 aa15.72■□□□□ 0.11
CMTM1-219ENST00000533953 MTFR1Q15390 333 aa15.72■□□□□ 0.11
CMTM1-219ENST00000533953 MORN1Q5T089 497 aa15.72■□□□□ 0.11
CMTM1-219ENST00000533953 CCDC174Q6PII3 467 aa15.72■□□□□ 0.11
CMTM1-219ENST00000533953 DCAF4Q8WV16 495 aa15.72■□□□□ 0.11
CMTM1-219ENST00000533953 USP6NLQ92738 828 aa15.72■□□□□ 0.11
CMTM1-219ENST00000533953 ARMC5Q96C12 935 aa15.72■□□□□ 0.11
CMTM1-219ENST00000533953 LRRC2Q9BYS8 371 aa15.72■□□□□ 0.11
CMTM1-219ENST00000533953 STAT2P52630 851 aa15.71■□□□□ 0.11
CMTM1-219ENST00000533953 ZNF543Q08ER8 600 aa15.71■□□□□ 0.11
CMTM1-219ENST00000533953 ADCK5Q3MIX3 580 aa15.71■□□□□ 0.11
CMTM1-219ENST00000533953 IFIT1BQ5T764 474 aaKnown RBP15.71■□□□□ 0.11
CMTM1-219ENST00000533953 SNRNP48Q6IEG0 339 aaKnown RBP15.71■□□□□ 0.11
CMTM1-219ENST00000533953 NPLOC4Q8TAT6 608 aa15.71■□□□□ 0.11
CMTM1-219ENST00000533953 CHURC1Q8WUH1 139 aa15.71■□□□□ 0.11
CMTM1-219ENST00000533953 ZNF333Q96JL9 665 aa15.71■□□□□ 0.11
CMTM1-219ENST00000533953 AGBL1Q96MI9 1066 aa15.71■□□□□ 0.11
CMTM1-219ENST00000533953 TCEANC2Q96MN5 208 aa15.71■□□□□ 0.11
CMTM1-219ENST00000533953 NUDT12Q9BQG2 462 aa15.71■□□□□ 0.11
CMTM1-219ENST00000533953 SLC38A10Q9HBR0 1119 aa15.71■□□□□ 0.11
CMTM1-219ENST00000533953 CTDP1Q9Y5B0 961 aaPredicted RBP15.71■□□□□ 0.11
CMTM1-219ENST00000533953 POTEFA5A3E0 1075 aa15.7■□□□□ 0.1
CMTM1-219ENST00000533953 PRC1O43663 620 aa15.7■□□□□ 0.1
CMTM1-219ENST00000533953 COBLO75128 1261 aa15.7■□□□□ 0.1
CMTM1-219ENST00000533953 SNHG28P0DPA3 235 aa15.7■□□□□ 0.1
CMTM1-219ENST00000533953 CPA1P15085 419 aa15.7■□□□□ 0.1
CMTM1-219ENST00000533953 MAP2K5Q13163 448 aa15.7■□□□□ 0.1
CMTM1-219ENST00000533953 IRF5Q13568 498 aa15.7■□□□□ 0.1
CMTM1-219ENST00000533953 CCDC178Q5BJE1 867 aa15.7■□□□□ 0.1
CMTM1-219ENST00000533953 TMEM67Q5HYA8 995 aa15.7■□□□□ 0.1
CMTM1-219ENST00000533953 FAM160B2Q86V87 743 aa15.7■□□□□ 0.1
CMTM1-219ENST00000533953 RIOX2Q8IUF8 465 aa15.7■□□□□ 0.1
CMTM1-219ENST00000533953 IGDCC4Q8TDY8 1250 aa15.7■□□□□ 0.1
CMTM1-219ENST00000533953 HOMER2Q9NSB8 354 aa15.7■□□□□ 0.1
CMTM1-219ENST00000533953 FLRT1Q9NZU1 646 aa15.7■□□□□ 0.1
CMTM1-219ENST00000533953 LAMA4Q16363 1823 aa15.7■□□□□ 0.1
CMTM1-219ENST00000533953 MYH4Q9Y623 1939 aa15.7■□□□□ 0.1
CMTM1-219ENST00000533953 ZNF536O15090 1300 aa15.69■□□□□ 0.1
CMTM1-219ENST00000533953 DOCK3Q8IZD9 2030 aa15.69■□□□□ 0.1
CMTM1-219ENST00000533953 SLC15A5A6NIM6 579 aa15.69■□□□□ 0.1
CMTM1-219ENST00000533953 INHAP05111 366 aa15.69■□□□□ 0.1
CMTM1-219ENST00000533953 PGK2P07205 417 aa15.69■□□□□ 0.1
CMTM1-219ENST00000533953 ADORA2AP29274 412 aa15.69■□□□□ 0.1
CMTM1-219ENST00000533953 SYDE2Q5VT97 1194 aa15.69■□□□□ 0.1
CMTM1-219ENST00000533953 RAB11FIP4Q86YS3 637 aa15.69■□□□□ 0.1
CMTM1-219ENST00000533953 STAG2Q8N3U4 1231 aa15.69■□□□□ 0.1
CMTM1-219ENST00000533953 SHCBP1Q8NEM2 672 aa15.69■□□□□ 0.1
CMTM1-219ENST00000533953 TRIB2Q92519 343 aa15.69■□□□□ 0.1
CMTM1-219ENST00000533953 VAT1LQ9HCJ6 419 aa15.69■□□□□ 0.1
CMTM1-219ENST00000533953 IVNS1ABPQ9Y6Y0 642 aa15.69■□□□□ 0.1
CMTM1-219ENST00000533953 GRB14Q14449 540 aa15.68■□□□□ 0.1
CMTM1-219ENST00000533953 WTAPQ15007 396 aa15.68■□□□□ 0.1
CMTM1-219ENST00000533953 BTNL9Q6UXG8 535 aa15.68■□□□□ 0.1
CMTM1-219ENST00000533953 NBPF11Q86T75 865 aa15.68■□□□□ 0.1
CMTM1-219ENST00000533953 SLAIN1Q8ND83 568 aa15.68■□□□□ 0.1
CMTM1-219ENST00000533953 MYL10Q9BUA6 226 aa15.68■□□□□ 0.1
CMTM1-219ENST00000533953 TEX13BQ9BXU2 312 aa15.68■□□□□ 0.1
CMTM1-219ENST00000533953 UNC93B1Q9H1C4 597 aa15.68■□□□□ 0.1
CMTM1-219ENST00000533953 MROH8Q9H579 483 aa15.68■□□□□ 0.1
CMTM1-219ENST00000533953 PLA2G6O60733 806 aa15.67■□□□□ 0.1
CMTM1-219ENST00000533953 SLC25A27O95847 323 aa15.67■□□□□ 0.1
CMTM1-219ENST00000533953 FCER1AP12319 257 aa15.67■□□□□ 0.1
CMTM1-219ENST00000533953 ALAS1P13196 640 aa15.67■□□□□ 0.1
CMTM1-219ENST00000533953 CCL5P13501 91 aa15.67■□□□□ 0.1
CMTM1-219ENST00000533953 EN2P19622 333 aaPredicted RBP15.67■□□□□ 0.1
CMTM1-219ENST00000533953 MCM5P33992 734 aa15.67■□□□□ 0.1
CMTM1-219ENST00000533953 HSPA4P34932 840 aa15.67■□□□□ 0.1
CMTM1-219ENST00000533953 RGS2P41220 211 aa15.67■□□□□ 0.1
CMTM1-219ENST00000533953 NT5C2P49902 561 aa15.67■□□□□ 0.1
CMTM1-219ENST00000533953 RNF20Q5VTR2 975 aa15.67■□□□□ 0.1
CMTM1-219ENST00000533953 DPP9Q86TI2 863 aa15.67■□□□□ 0.1
CMTM1-219ENST00000533953 PXYLP1Q8TE99 480 aa15.67■□□□□ 0.1
CMTM1-219ENST00000533953 SOCS4Q8WXH5 440 aa15.67■□□□□ 0.1
CMTM1-219ENST00000533953 NEK1Q96PY6 1258 aa15.67■□□□□ 0.1
CMTM1-219ENST00000533953 MMP19Q99542 508 aa15.67■□□□□ 0.1
CMTM1-219ENST00000533953 LY9Q9HBG7 655 aa15.67■□□□□ 0.1
CMTM1-219ENST00000533953 SNX14Q9Y5W7 946 aa15.67■□□□□ 0.1
CMTM1-219ENST00000533953 MGAMO43451 1857 aa15.67■□□□□ 0.1
CMTM1-219ENST00000533953 HTTP42858 3142 aa15.67■□□□□ 0.1
CMTM1-219ENST00000533953 ERICH2A1L162 156 aa15.66■□□□□ 0.1
CMTM1-219ENST00000533953 SH2B2O14492 632 aaPredicted RBP15.66■□□□□ 0.1
CMTM1-219ENST00000533953 ATP2A1O14983 1001 aa15.66■□□□□ 0.1
CMTM1-219ENST00000533953 PARP1P09874 1014 aaKnown RBP15.66■□□□□ 0.1
CMTM1-219ENST00000533953 SLC35G1Q2M3R5 365 aa15.66■□□□□ 0.1
CMTM1-219ENST00000533953 MUM1L1Q5H9M0 696 aa15.66■□□□□ 0.1
CMTM1-219ENST00000533953 NUP133Q8WUM0 1156 aa15.66■□□□□ 0.1
CMTM1-219ENST00000533953 USP26Q9BXU7 913 aa15.66■□□□□ 0.1
CMTM1-219ENST00000533953 STRNO43815 780 aa15.65■□□□□ 0.1
CMTM1-219ENST00000533953 REC8O95072 547 aa15.65■□□□□ 0.1
CMTM1-219ENST00000533953 SEC24BO95487 1268 aa15.65■□□□□ 0.1
CMTM1-219ENST00000533953 XRCC5P13010 732 aaKnown RBP15.65■□□□□ 0.1
CMTM1-219ENST00000533953 ZKSCAN1P17029 563 aaPredicted RBP15.65■□□□□ 0.1
CMTM1-219ENST00000533953 RXRAP19793 462 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms