RNA–Protein interactions for RNA: ENST00000533827.5

VPS51-213, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 1,078 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-213ENST00000533827 ARRDC4Q8NCT1 418 aa20.71■□□□□ 0.91
VPS51-213ENST00000533827 TINF2Q9BSI4 451 aa20.71■□□□□ 0.91
VPS51-213ENST00000533827 NRBP1Q9UHY1 535 aa20.71■□□□□ 0.91
VPS51-213ENST00000533827 FEM1BQ9UK73 627 aa20.71■□□□□ 0.91
VPS51-213ENST00000533827 MAGEA10P43363 369 aaPredicted RBP20.7■□□□□ 0.9
VPS51-213ENST00000533827 CTDSPL2Q05D32 466 aa20.7■□□□□ 0.9
VPS51-213ENST00000533827 SLFN13Q68D06 897 aa20.7■□□□□ 0.9
VPS51-213ENST00000533827 TICAM2Q86XR7 235 aa20.7■□□□□ 0.9
VPS51-213ENST00000533827 SMC5Q8IY18 1101 aa20.7■□□□□ 0.9
VPS51-213ENST00000533827 KIFC2Q96AC6 838 aa20.7■□□□□ 0.9
VPS51-213ENST00000533827 SLC38A10Q9HBR0 1119 aa20.7■□□□□ 0.9
VPS51-213ENST00000533827 INCENPQ9NQS7 918 aa20.7■□□□□ 0.9
VPS51-213ENST00000533827 ANAPC4Q9UJX5 808 aa20.7■□□□□ 0.9
VPS51-213ENST00000533827 LAMA3Q16787 3333 aa20.69■□□□□ 0.9
VPS51-213ENST00000533827 ZBED4O75132 1171 aa20.69■□□□□ 0.9
VPS51-213ENST00000533827 BMP3P12645 472 aa20.69■□□□□ 0.9
VPS51-213ENST00000533827 ALX1Q15699 326 aa20.69■□□□□ 0.9
VPS51-213ENST00000533827 CPXCR1Q8N123 301 aa20.69■□□□□ 0.9
VPS51-213ENST00000533827 LNPKQ9C0E8 428 aa20.69■□□□□ 0.9
VPS51-213ENST00000533827 TACC3Q9Y6A5 838 aa20.69■□□□□ 0.9
VPS51-213ENST00000533827 DNAJC25-GNG10A0A024R161 153 aa20.68■□□□□ 0.9
VPS51-213ENST00000533827 SOX1O00570 391 aaPredicted RBP20.68■□□□□ 0.9
VPS51-213ENST00000533827 ATN1P54259 1190 aaPredicted RBP20.68■□□□□ 0.9
VPS51-213ENST00000533827 OAZ1P54368 228 aa20.68■□□□□ 0.9
VPS51-213ENST00000533827 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.68■□□□□ 0.9
VPS51-213ENST00000533827 GMCL1Q96IK5 515 aa20.68■□□□□ 0.9
VPS51-213ENST00000533827 FAM227BQ96M60 508 aa20.68■□□□□ 0.9
VPS51-213ENST00000533827 RAVER2Q9HCJ3 691 aaKnown RBP20.68■□□□□ 0.9
VPS51-213ENST00000533827 IL17RBQ9NRM6 502 aa20.68■□□□□ 0.9
VPS51-213ENST00000533827 A0A0D9SFI3 127 aa20.67■□□□□ 0.9
VPS51-213ENST00000533827 TSPY2A6NKD2 308 aa20.67■□□□□ 0.9
VPS51-213ENST00000533827 KBTBD13C9JR72 458 aa20.67■□□□□ 0.9
VPS51-213ENST00000533827 FGRP09769 529 aa20.67■□□□□ 0.9
VPS51-213ENST00000533827 ZNF865P0CJ78 1059 aaPredicted RBP20.67■□□□□ 0.9
VPS51-213ENST00000533827 TAL1P17542 331 aaPredicted RBP20.67■□□□□ 0.9
VPS51-213ENST00000533827 LRRC41Q15345 812 aa20.67■□□□□ 0.9
VPS51-213ENST00000533827 MCMDC2Q4G0Z9 681 aa20.67■□□□□ 0.9
VPS51-213ENST00000533827 PPP4R3BQ5MIZ7 849 aa20.67■□□□□ 0.9
VPS51-213ENST00000533827 MSL3Q8N5Y2 521 aaKnown RBP20.67■□□□□ 0.9
VPS51-213ENST00000533827 RWDD1Q9H446 243 aaPredicted RBP20.67■□□□□ 0.9
VPS51-213ENST00000533827 CTDP1Q9Y5B0 961 aaPredicted RBP20.67■□□□□ 0.9
VPS51-213ENST00000533827 TMEM232C9JQI7 657 aa20.66■□□□□ 0.9
VPS51-213ENST00000533827 FDX1P10109 184 aa20.66■□□□□ 0.9
VPS51-213ENST00000533827 NOVP48745 357 aa20.66■□□□□ 0.9
VPS51-213ENST00000533827 DDX11Q96FC9 970 aa20.66■□□□□ 0.9
VPS51-213ENST00000533827 STX8Q9UNK0 236 aa20.66■□□□□ 0.9
VPS51-213ENST00000533827 ORC4O43929 436 aa20.65■□□□□ 0.9
VPS51-213ENST00000533827 NMT2O60551 498 aa20.65■□□□□ 0.9
VPS51-213ENST00000533827 IGHDP01880 384 aa20.65■□□□□ 0.9
VPS51-213ENST00000533827 FGAP02671 866 aa20.65■□□□□ 0.9
VPS51-213ENST00000533827 SLC4A3P48751 1232 aa20.65■□□□□ 0.9
VPS51-213ENST00000533827 STAT2P52630 851 aa20.65■□□□□ 0.9
VPS51-213ENST00000533827 RTP1P59025 263 aa20.65■□□□□ 0.9
VPS51-213ENST00000533827 B4GALNT3Q6L9W6 998 aa20.65■□□□□ 0.9
VPS51-213ENST00000533827 MAMDC4Q6UXC1 1216 aa20.65■□□□□ 0.9
VPS51-213ENST00000533827 SLC39A5Q6ZMH5 540 aa20.65■□□□□ 0.9
VPS51-213ENST00000533827 CHST13Q8NET6 341 aa20.65■□□□□ 0.9
VPS51-213ENST00000533827 LRCH3Q96II8 777 aa20.65■□□□□ 0.9
VPS51-213ENST00000533827 FBXO40Q9UH90 709 aa20.65■□□□□ 0.9
VPS51-213ENST00000533827 SMCHD1A6NHR9 2005 aa20.65■□□□□ 0.9
VPS51-213ENST00000533827 SYNGAP1Q96PV0 1343 aa20.64■□□□□ 0.89
VPS51-213ENST00000533827 RANBP6O60518 1105 aaKnown RBP20.64■□□□□ 0.89
VPS51-213ENST00000533827 PLA2G6O60733 806 aa20.64■□□□□ 0.89
VPS51-213ENST00000533827 SNAI1O95863 264 aaPredicted RBP20.64■□□□□ 0.89
VPS51-213ENST00000533827 HSPD1P10809 573 aaKnown RBP20.64■□□□□ 0.89
VPS51-213ENST00000533827 RARBP10826 455 aa20.64■□□□□ 0.89
VPS51-213ENST00000533827 AKR1A1P14550 325 aa20.64■□□□□ 0.89
VPS51-213ENST00000533827 MCCP23508 829 aa20.64■□□□□ 0.89
VPS51-213ENST00000533827 SLC1A4P43007 532 aa20.64■□□□□ 0.89
VPS51-213ENST00000533827 NMIQ13287 307 aaPredicted RBP20.64■□□□□ 0.89
VPS51-213ENST00000533827 SNX17Q15036 470 aa20.64■□□□□ 0.89
VPS51-213ENST00000533827 ZNF467Q7Z7K2 595 aaPredicted RBP20.64■□□□□ 0.89
VPS51-213ENST00000533827 ZNF589Q86UQ0 364 aaPredicted RBP20.64■□□□□ 0.89
VPS51-213ENST00000533827 FAM160B2Q86V87 743 aa20.64■□□□□ 0.89
VPS51-213ENST00000533827 CHD1LQ86WJ1 897 aa20.64■□□□□ 0.89
VPS51-213ENST00000533827 TDHQ8IZJ6 230 aa20.64■□□□□ 0.89
VPS51-213ENST00000533827 EXOC6Q8TAG9 804 aa20.64■□□□□ 0.89
VPS51-213ENST00000533827 CHURC1Q8WUH1 139 aa20.64■□□□□ 0.89
VPS51-213ENST00000533827 STAG1Q8WVM7 1258 aa20.64■□□□□ 0.89
VPS51-213ENST00000533827 UBE2OQ9C0C9 1292 aaKnown RBP20.64■□□□□ 0.89
VPS51-213ENST00000533827 XPNPEP3Q9NQH7 507 aa20.64■□□□□ 0.89
VPS51-213ENST00000533827 CNPY2Q9Y2B0 182 aa20.64■□□□□ 0.89
VPS51-213ENST00000533827 ZMYM6O95789 1325 aa20.63■□□□□ 0.89
VPS51-213ENST00000533827 TRIM6-TRIM34B2RNG4 842 aa20.63■□□□□ 0.89
VPS51-213ENST00000533827 MYCNP04198 464 aaPredicted RBP20.63■□□□□ 0.89
VPS51-213ENST00000533827 ADCYAP1R1P41586 468 aa20.63■□□□□ 0.89
VPS51-213ENST00000533827 MDM2Q00987 491 aaPredicted RBP20.63■□□□□ 0.89
VPS51-213ENST00000533827 NUCB1Q02818 461 aa20.63■□□□□ 0.89
VPS51-213ENST00000533827 RCSD1Q6JBY9 416 aa20.63■□□□□ 0.89
VPS51-213ENST00000533827 OSBPL3Q9H4L5 887 aa20.63■□□□□ 0.89
VPS51-213ENST00000533827 ZNF536O15090 1300 aa20.62■□□□□ 0.89
VPS51-213ENST00000533827 PGK1P00558 417 aa20.62■□□□□ 0.89
VPS51-213ENST00000533827 LRIT3Q3SXY7 679 aa20.62■□□□□ 0.89
VPS51-213ENST00000533827 C1orf53Q5VUE5 145 aa20.62■□□□□ 0.89
VPS51-213ENST00000533827 KCTD1Q719H9 257 aa20.62■□□□□ 0.89
VPS51-213ENST00000533827 PLEKHM2Q8IWE5 1019 aa20.62■□□□□ 0.89
VPS51-213ENST00000533827 ANKRD35Q8N283 1001 aa20.62■□□□□ 0.89
VPS51-213ENST00000533827 RILPL2Q969X0 211 aa20.62■□□□□ 0.89
VPS51-213ENST00000533827 CHMP4CQ96CF2 233 aa20.62■□□□□ 0.89
VPS51-213ENST00000533827 FGD4Q96M96 766 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms