RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 UMODL1Q5DID0 1318 aa14.96□□□□□ -0.01
SVIP-205ENST00000533774 SLC25A27O95847 323 aa14.96□□□□□ -0.01
SVIP-205ENST00000533774 POLR3DP05423 398 aaPredicted RBP14.96□□□□□ -0.01
SVIP-205ENST00000533774 RAB30Q15771 203 aa14.96□□□□□ -0.01
SVIP-205ENST00000533774 PSRC1Q6PGN9 363 aaPredicted RBP14.96□□□□□ -0.01
SVIP-205ENST00000533774 FAM126BQ8IXS8 530 aa14.96□□□□□ -0.01
SVIP-205ENST00000533774 TMEM199Q8N511 208 aa14.96□□□□□ -0.01
SVIP-205ENST00000533774 REPS2Q8NFH8 660 aa14.96□□□□□ -0.01
SVIP-205ENST00000533774 VWCEQ96DN2 955 aa14.96□□□□□ -0.01
SVIP-205ENST00000533774 VCPKMTQ9H867 229 aa14.96□□□□□ -0.01
SVIP-205ENST00000533774 IL23AQ9NPF7 189 aa14.96□□□□□ -0.01
SVIP-205ENST00000533774 ARIH1Q9Y4X5 557 aaPredicted RBP14.96□□□□□ -0.01
SVIP-205ENST00000533774 ELP1O95163 1332 aa14.95□□□□□ -0.02
SVIP-205ENST00000533774 ARVCFO00192 962 aa14.95□□□□□ -0.02
SVIP-205ENST00000533774 RFXAPO00287 272 aa14.95□□□□□ -0.02
SVIP-205ENST00000533774 ANP32CO43423 234 aa14.95□□□□□ -0.02
SVIP-205ENST00000533774 IGSF3O75054 1194 aa14.95□□□□□ -0.02
SVIP-205ENST00000533774 CD4P01730 458 aa14.95□□□□□ -0.02
SVIP-205ENST00000533774 GNAI2P04899 355 aa14.95□□□□□ -0.02
SVIP-205ENST00000533774 ASGR1P07306 291 aa14.95□□□□□ -0.02
SVIP-205ENST00000533774 AKR1B1P15121 316 aa14.95□□□□□ -0.02
SVIP-205ENST00000533774 CST5P28325 142 aaPredicted RBP14.95□□□□□ -0.02
SVIP-205ENST00000533774 DYNLL2Q96FJ2 89 aa14.95□□□□□ -0.02
SVIP-205ENST00000533774 CCDC8Q9H0W5 538 aaPredicted RBP14.95□□□□□ -0.02
SVIP-205ENST00000533774 SLC28A3Q9HAS3 691 aa14.95□□□□□ -0.02
SVIP-205ENST00000533774 RTN4Q9NQC3 1192 aaKnown RBP14.95□□□□□ -0.02
SVIP-205ENST00000533774 ZNF214Q9UL59 606 aaPredicted RBP14.95□□□□□ -0.02
SVIP-205ENST00000533774 TMX2Q9Y320 296 aa14.95□□□□□ -0.02
SVIP-205ENST00000533774 PTPRSQ13332 1948 aa14.95□□□□□ -0.02
SVIP-205ENST00000533774 GREB1LQ9C091 1923 aaPredicted RBP14.94□□□□□ -0.02
SVIP-205ENST00000533774 CTAGE5O15320 804 aa14.94□□□□□ -0.02
SVIP-205ENST00000533774 DUSP11O75319 330 aaKnown RBP14.94□□□□□ -0.02
SVIP-205ENST00000533774 KCTD2Q14681 263 aa14.94□□□□□ -0.02
SVIP-205ENST00000533774 CCDC174Q6PII3 467 aa14.94□□□□□ -0.02
SVIP-205ENST00000533774 TMEM179Q6ZVK1 233 aa14.94□□□□□ -0.02
SVIP-205ENST00000533774 OTOP2Q7RTS6 562 aa14.94□□□□□ -0.02
SVIP-205ENST00000533774 EAF2Q96CJ1 260 aaPredicted RBP14.94□□□□□ -0.02
SVIP-205ENST00000533774 GLT1D1Q96MS3 346 aa14.94□□□□□ -0.02
SVIP-205ENST00000533774 FAM184BQ9ULE4 1060 aa14.94□□□□□ -0.02
SVIP-205ENST00000533774 CNPY2Q9Y2B0 182 aa14.94□□□□□ -0.02
SVIP-205ENST00000533774 MROH7Q68CQ1 1323 aa14.93□□□□□ -0.02
SVIP-205ENST00000533774 TET1Q8NFU7 2136 aa14.93□□□□□ -0.02
SVIP-205ENST00000533774 A0A0U1RQG5 324 aaPredicted RBP14.93□□□□□ -0.02
SVIP-205ENST00000533774 APBB1O00213 710 aa14.93□□□□□ -0.02
SVIP-205ENST00000533774 VWA5AO00534 786 aa14.93□□□□□ -0.02
SVIP-205ENST00000533774 ERC2O15083 957 aa14.93□□□□□ -0.02
SVIP-205ENST00000533774 WDR46O15213 610 aaKnown RBP14.93□□□□□ -0.02
SVIP-205ENST00000533774 FGBP02675 491 aa14.93□□□□□ -0.02
SVIP-205ENST00000533774 C6orf222P0C671 652 aaPredicted RBP14.93□□□□□ -0.02
SVIP-205ENST00000533774 STAT3P40763 770 aa14.93□□□□□ -0.02
SVIP-205ENST00000533774 RARSP54136 660 aaKnown RBP14.93□□□□□ -0.02
SVIP-205ENST00000533774 KRT40Q6A162 431 aa14.93□□□□□ -0.02
SVIP-205ENST00000533774 IFNLR1Q8IU57 520 aaPredicted RBP14.93□□□□□ -0.02
SVIP-205ENST00000533774 CERS3Q8IU89 383 aa14.93□□□□□ -0.02
SVIP-205ENST00000533774 FGD4Q96M96 766 aa14.93□□□□□ -0.02
SVIP-205ENST00000533774 UPF3AQ9H1J1 476 aaKnown RBP14.93□□□□□ -0.02
SVIP-205ENST00000533774 MCM9Q9NXL9 1143 aa14.93□□□□□ -0.02
SVIP-205ENST00000533774 ZHX1Q9UKY1 873 aaPredicted RBP14.93□□□□□ -0.02
SVIP-205ENST00000533774 HCN4Q9Y3Q4 1203 aa14.93□□□□□ -0.02
SVIP-205ENST00000533774 MYH4Q9Y623 1939 aa14.93□□□□□ -0.02
SVIP-205ENST00000533774 DNAJC25-GNG10A0A024R161 153 aa14.92□□□□□ -0.02
SVIP-205ENST00000533774 FAM86C2PA6NEL3 165 aa14.92□□□□□ -0.02
SVIP-205ENST00000533774 EPOPA6NHQ4 379 aa14.92□□□□□ -0.02
SVIP-205ENST00000533774 TLL1O43897 1013 aa14.92□□□□□ -0.02
SVIP-205ENST00000533774 ICA1Q05084 483 aa14.92□□□□□ -0.02
SVIP-205ENST00000533774 MAMDC4Q6UXC1 1216 aa14.92□□□□□ -0.02
SVIP-205ENST00000533774 SSH3Q8TE77 659 aa14.92□□□□□ -0.02
SVIP-205ENST00000533774 SDR42E1Q8WUS8 393 aa14.92□□□□□ -0.02
SVIP-205ENST00000533774 ARHGAP45Q92619 1136 aa14.92□□□□□ -0.02
SVIP-205ENST00000533774 VTI1AQ96AJ9 217 aa14.92□□□□□ -0.02
SVIP-205ENST00000533774 TSPYL2Q9H2G4 693 aaPredicted RBP14.92□□□□□ -0.02
SVIP-205ENST00000533774 RIPK3Q9Y572 518 aa14.92□□□□□ -0.02
SVIP-205ENST00000533774 MTCH2Q9Y6C9 303 aa14.92□□□□□ -0.02
SVIP-205ENST00000533774 COL4A4P53420 1690 aaPredicted RBP14.92□□□□□ -0.02
SVIP-205ENST00000533774 MAGEB6P1A0A0J9YX57 407 aa14.91□□□□□ -0.02
SVIP-205ENST00000533774 BCAR3O75815 825 aa14.91□□□□□ -0.02
SVIP-205ENST00000533774 GJA9P57773 515 aa14.91□□□□□ -0.02
SVIP-205ENST00000533774 TMEM31Q5JXX7 168 aa14.91□□□□□ -0.02
SVIP-205ENST00000533774 PPP2R2DQ66LE6 453 aa14.91□□□□□ -0.02
SVIP-205ENST00000533774 ALYREFQ86V81 257 aaKnown RBP14.91□□□□□ -0.02
SVIP-205ENST00000533774 ARHGEF10LQ9HCE6 1279 aa14.91□□□□□ -0.02
SVIP-205ENST00000533774 DCP1AQ9NPI6 582 aaPredicted RBP14.91□□□□□ -0.02
SVIP-205ENST00000533774 PPP1R9AQ9ULJ8 1098 aa14.91□□□□□ -0.02
SVIP-205ENST00000533774 ASTN1O14525 1302 aa14.91□□□□□ -0.02
SVIP-205ENST00000533774 GRIN2DO15399 1336 aa14.91□□□□□ -0.02
SVIP-205ENST00000533774 SURF6O75683 361 aaKnown RBP14.9□□□□□ -0.02
SVIP-205ENST00000533774 ARHGEF15O94989 841 aa14.9□□□□□ -0.02
SVIP-205ENST00000533774 EEF2P13639 858 aaKnown RBP14.9□□□□□ -0.02
SVIP-205ENST00000533774 TRIM27P14373 513 aa14.9□□□□□ -0.02
SVIP-205ENST00000533774 PTGS1P23219 599 aa14.9□□□□□ -0.02
SVIP-205ENST00000533774 CCL23P55773 120 aa14.9□□□□□ -0.02
SVIP-205ENST00000533774 BEX3Q00994 111 aa14.9□□□□□ -0.02
SVIP-205ENST00000533774 OS9Q13438 667 aaPredicted RBP14.9□□□□□ -0.02
SVIP-205ENST00000533774 ACVR2BQ13705 512 aa14.9□□□□□ -0.02
SVIP-205ENST00000533774 SKIV2LQ15477 1246 aaKnown RBP14.9□□□□□ -0.02
SVIP-205ENST00000533774 CCDC144BQ3MJ40 725 aa14.9□□□□□ -0.02
SVIP-205ENST00000533774 GNASQ5JWF2 1037 aa14.9□□□□□ -0.02
SVIP-205ENST00000533774 MSL3Q8N5Y2 521 aaKnown RBP14.9□□□□□ -0.02
SVIP-205ENST00000533774 SLC43A3Q8NBI5 491 aa14.9□□□□□ -0.02
SVIP-205ENST00000533774 PCSK9Q8NBP7 692 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms