RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 REPS2Q8NFH8 660 aa18.62■□□□□ 0.57
TSKU-204ENST00000533752 KIFC2Q96AC6 838 aa18.62■□□□□ 0.57
TSKU-204ENST00000533752 UBAC1Q9BSL1 405 aa18.62■□□□□ 0.57
TSKU-204ENST00000533752 ZNF214Q9UL59 606 aaPredicted RBP18.62■□□□□ 0.57
TSKU-204ENST00000533752 TMEM232C9JQI7 657 aa18.61■□□□□ 0.57
TSKU-204ENST00000533752 CYP21A2P08686 494 aa18.61■□□□□ 0.57
TSKU-204ENST00000533752 ZKSCAN1P17029 563 aaPredicted RBP18.61■□□□□ 0.57
TSKU-204ENST00000533752 CYP2B6P20813 491 aa18.61■□□□□ 0.57
TSKU-204ENST00000533752 STAT3P40763 770 aa18.61■□□□□ 0.57
TSKU-204ENST00000533752 RALYLQ86SE5 291 aaKnown RBP18.61■□□□□ 0.57
TSKU-204ENST00000533752 ZSCAN10Q96SZ4 725 aaPredicted RBP18.61■□□□□ 0.57
TSKU-204ENST00000533752 SLC38A10Q9HBR0 1119 aa18.61■□□□□ 0.57
TSKU-204ENST00000533752 SLC5A4Q9NY91 659 aa18.61■□□□□ 0.57
TSKU-204ENST00000533752 RBM8AQ9Y5S9 174 aaKnown RBP18.61■□□□□ 0.57
TSKU-204ENST00000533752 CENPFP49454 3210 aa18.61■□□□□ 0.57
TSKU-204ENST00000533752 PLXNB2O15031 1838 aa18.6■□□□□ 0.57
TSKU-204ENST00000533752 HOXC6P09630 235 aa18.6■□□□□ 0.57
TSKU-204ENST00000533752 CCL5P13501 91 aa18.6■□□□□ 0.57
TSKU-204ENST00000533752 NKX2-3Q8TAU0 364 aa18.6■□□□□ 0.57
TSKU-204ENST00000533752 LSG1Q9H089 658 aaKnown RBP18.6■□□□□ 0.57
TSKU-204ENST00000533752 ANO2Q9NQ90 1003 aa18.6■□□□□ 0.57
TSKU-204ENST00000533752 ZSWIM5Q9P217 1185 aa18.6■□□□□ 0.57
TSKU-204ENST00000533752 TNKSO95271 1327 aa18.59■□□□□ 0.57
TSKU-204ENST00000533752 MYCP01106 439 aaPredicted RBP18.59■□□□□ 0.57
TSKU-204ENST00000533752 FCER1AP12319 257 aa18.59■□□□□ 0.57
TSKU-204ENST00000533752 CAPN2P17655 700 aa18.59■□□□□ 0.57
TSKU-204ENST00000533752 SNRNP48Q6IEG0 339 aaKnown RBP18.59■□□□□ 0.57
TSKU-204ENST00000533752 KCTD1Q719H9 257 aa18.59■□□□□ 0.57
TSKU-204ENST00000533752 TRIB2Q92519 343 aa18.59■□□□□ 0.57
TSKU-204ENST00000533752 ANKS1AQ92625 1134 aa18.59■□□□□ 0.57
TSKU-204ENST00000533752 ZKSCAN3Q9BRR0 538 aa18.59■□□□□ 0.57
TSKU-204ENST00000533752 KAT14Q9H8E8 782 aa18.59■□□□□ 0.57
TSKU-204ENST00000533752 MTMR7Q9Y216 660 aa18.59■□□□□ 0.57
TSKU-204ENST00000533752 COL11A1P12107 1806 aaPredicted RBP18.58■□□□□ 0.57
TSKU-204ENST00000533752 POTEFA5A3E0 1075 aa18.58■□□□□ 0.56
TSKU-204ENST00000533752 PDHBP11177 359 aa18.58■□□□□ 0.56
TSKU-204ENST00000533752 ADORA2AP29274 412 aa18.58■□□□□ 0.56
TSKU-204ENST00000533752 MLLT1Q03111 559 aaPredicted RBP18.58■□□□□ 0.56
TSKU-204ENST00000533752 KCTD2Q14681 263 aa18.58■□□□□ 0.56
TSKU-204ENST00000533752 SART3Q15020 963 aaKnown RBP18.58■□□□□ 0.56
TSKU-204ENST00000533752 MTFR1Q15390 333 aa18.58■□□□□ 0.56
TSKU-204ENST00000533752 DPP9Q86TI2 863 aa18.58■□□□□ 0.56
TSKU-204ENST00000533752 ENAHQ8N8S7 591 aaPredicted RBP18.58■□□□□ 0.56
TSKU-204ENST00000533752 NCOA7Q8NI08 942 aa18.58■□□□□ 0.56
TSKU-204ENST00000533752 MMP19Q99542 508 aa18.58■□□□□ 0.56
TSKU-204ENST00000533752 RNF208Q9H0X6 261 aa18.58■□□□□ 0.56
TSKU-204ENST00000533752 E7EWF7 191 aa18.57■□□□□ 0.56
TSKU-204ENST00000533752 GJB1P08034 283 aa18.57■□□□□ 0.56
TSKU-204ENST00000533752 SNHG28P0DPA3 235 aa18.57■□□□□ 0.56
TSKU-204ENST00000533752 GPATCH4Q5T3I0 446 aaKnown RBP18.57■□□□□ 0.56
TSKU-204ENST00000533752 RNF20Q5VTR2 975 aa18.57■□□□□ 0.56
TSKU-204ENST00000533752 MFSD14CQ5VZR4 134 aa18.57■□□□□ 0.56
TSKU-204ENST00000533752 BTNL9Q6UXG8 535 aa18.57■□□□□ 0.56
TSKU-204ENST00000533752 CPXCR1Q8N123 301 aa18.57■□□□□ 0.56
TSKU-204ENST00000533752 PNMA1Q8ND90 353 aa18.57■□□□□ 0.56
TSKU-204ENST00000533752 FBXO40Q9UH90 709 aa18.57■□□□□ 0.56
TSKU-204ENST00000533752 RPTORQ8N122 1335 aa18.56■□□□□ 0.56
TSKU-204ENST00000533752 ERICH2A1L162 156 aa18.56■□□□□ 0.56
TSKU-204ENST00000533752 ZNF543Q08ER8 600 aa18.56■□□□□ 0.56
TSKU-204ENST00000533752 IFIT1BQ5T764 474 aaKnown RBP18.56■□□□□ 0.56
TSKU-204ENST00000533752 CHST13Q8NET6 341 aa18.56■□□□□ 0.56
TSKU-204ENST00000533752 UNC93B1Q9H1C4 597 aa18.56■□□□□ 0.56
TSKU-204ENST00000533752 RAVER2Q9HCJ3 691 aaKnown RBP18.56■□□□□ 0.56
TSKU-204ENST00000533752 HMX1Q9NP08 348 aaPredicted RBP18.56■□□□□ 0.56
TSKU-204ENST00000533752 PNMA2Q9UL42 364 aa18.56■□□□□ 0.56
TSKU-204ENST00000533752 PRR12Q9ULL5 1215 aa18.56■□□□□ 0.56
TSKU-204ENST00000533752 PRKAR2AP13861 404 aaKnown RBP18.55■□□□□ 0.56
TSKU-204ENST00000533752 TKFCQ3LXA3 575 aa18.55■□□□□ 0.56
TSKU-204ENST00000533752 ASPRV1Q53RT3 343 aa18.55■□□□□ 0.56
TSKU-204ENST00000533752 MAP3K21Q5TCX8 1036 aa18.55■□□□□ 0.56
TSKU-204ENST00000533752 SYDE2Q5VT97 1194 aa18.55■□□□□ 0.56
TSKU-204ENST00000533752 OLFML2BQ68BL8 750 aa18.55■□□□□ 0.56
TSKU-204ENST00000533752 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.55■□□□□ 0.56
TSKU-204ENST00000533752 RASGRP2Q7LDG7 609 aa18.55■□□□□ 0.56
TSKU-204ENST00000533752 CHMP4CQ96CF2 233 aa18.55■□□□□ 0.56
TSKU-204ENST00000533752 PAK6Q9NQU5 681 aaPredicted RBP18.55■□□□□ 0.56
TSKU-204ENST00000533752 FRMPD2Q68DX3 1309 aaPredicted RBP18.54■□□□□ 0.56
TSKU-204ENST00000533752 SLC27A2O14975 620 aa18.54■□□□□ 0.56
TSKU-204ENST00000533752 GJA8P48165 433 aa18.54■□□□□ 0.56
TSKU-204ENST00000533752 CCL14Q16627 93 aa18.54■□□□□ 0.56
TSKU-204ENST00000533752 CYB5R4Q7L1T6 521 aa18.54■□□□□ 0.56
TSKU-204ENST00000533752 MTA3Q9BTC8 594 aa18.54■□□□□ 0.56
TSKU-204ENST00000533752 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.54■□□□□ 0.56
TSKU-204ENST00000533752 GPCPD1Q9NPB8 672 aa18.54■□□□□ 0.56
TSKU-204ENST00000533752 IFIT3O14879 490 aaKnown RBP18.53■□□□□ 0.56
TSKU-204ENST00000533752 EN2P19622 333 aaPredicted RBP18.53■□□□□ 0.56
TSKU-204ENST00000533752 NECTIN1Q15223 517 aa18.53■□□□□ 0.56
TSKU-204ENST00000533752 SEC23AQ15436 765 aa18.53■□□□□ 0.56
TSKU-204ENST00000533752 CREB3L3Q68CJ9 461 aa18.53■□□□□ 0.56
TSKU-204ENST00000533752 STOX1Q6ZVD7 989 aa18.53■□□□□ 0.56
TSKU-204ENST00000533752 NPLOC4Q8TAT6 608 aa18.53■□□□□ 0.56
TSKU-204ENST00000533752 U2AF1L4Q8WU68 220 aaKnown RBP18.53■□□□□ 0.56
TSKU-204ENST00000533752 RANBP17Q9H2T7 1088 aaKnown RBP18.53■□□□□ 0.56
TSKU-204ENST00000533752 ACAD9Q9H845 621 aa18.53■□□□□ 0.56
TSKU-204ENST00000533752 DIS3Q9Y2L1 958 aaKnown RBP18.53■□□□□ 0.56
TSKU-204ENST00000533752 ICAM1P05362 532 aa18.52■□□□□ 0.56
TSKU-204ENST00000533752 PARP1P09874 1014 aaKnown RBP18.52■□□□□ 0.56
TSKU-204ENST00000533752 TRIM32Q13049 653 aa18.52■□□□□ 0.56
TSKU-204ENST00000533752 TTBK2Q6IQ55 1244 aa18.52■□□□□ 0.56
TSKU-204ENST00000533752 MB21D2Q8IYB1 491 aaPredicted RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms