RNA–Protein interactions for RNA: ENST00000533279.1

GMDS-210, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-210ENST00000533279 EMILIN3Q9NT22 766 aa13.18□□□□□ -0.3
GMDS-210ENST00000533279 HOXC10Q9NYD6 342 aa13.18□□□□□ -0.3
GMDS-210ENST00000533279 SMC3Q9UQE7 1217 aa13.18□□□□□ -0.3
GMDS-210ENST00000533279 SLC45A1Q9Y2W3 748 aa13.18□□□□□ -0.3
GMDS-210ENST00000533279 RBM19Q9Y4C8 960 aaKnown RBP13.18□□□□□ -0.3
GMDS-210ENST00000533279 ALDH1A1P00352 501 aa13.17□□□□□ -0.3
GMDS-210ENST00000533279 GOLGA8HP0CJ92 632 aa13.17□□□□□ -0.3
GMDS-210ENST00000533279 C1QTNF8P60827 252 aa13.17□□□□□ -0.3
GMDS-210ENST00000533279 COL9A3Q14050 684 aaPredicted RBP13.17□□□□□ -0.3
GMDS-210ENST00000533279 TRIM29Q14134 588 aa13.17□□□□□ -0.3
GMDS-210ENST00000533279 CYP4F22Q6NT55 531 aa13.17□□□□□ -0.3
GMDS-210ENST00000533279 ANKRD23Q86SG2 305 aa13.17□□□□□ -0.3
GMDS-210ENST00000533279 MB21D1Q8N884 522 aa13.17□□□□□ -0.3
GMDS-210ENST00000533279 PRPF38AQ8NAV1 312 aaKnown RBP13.17□□□□□ -0.3
GMDS-210ENST00000533279 KIFC2Q96AC6 838 aa13.17□□□□□ -0.3
GMDS-210ENST00000533279 NUP88Q99567 741 aaPredicted RBP13.17□□□□□ -0.3
GMDS-210ENST00000533279 SPZ1Q9BXG8 430 aa13.17□□□□□ -0.3
GMDS-210ENST00000533279 MAD2L2Q9UI95 211 aa13.17□□□□□ -0.3
GMDS-210ENST00000533279 PALM3A6NDB9 673 aaPredicted RBP13.16□□□□□ -0.3
GMDS-210ENST00000533279 IFNAR1P17181 557 aa13.16□□□□□ -0.3
GMDS-210ENST00000533279 GJA5P36382 358 aa13.16□□□□□ -0.3
GMDS-210ENST00000533279 SCRN1Q12765 414 aa13.16□□□□□ -0.3
GMDS-210ENST00000533279 COG2Q14746 738 aa13.16□□□□□ -0.3
GMDS-210ENST00000533279 CATSPERGQ6ZRH7 1159 aa13.16□□□□□ -0.3
GMDS-210ENST00000533279 NECAB1Q8N987 351 aa13.16□□□□□ -0.3
GMDS-210ENST00000533279 CCDC12Q8WUD4 166 aaPredicted RBP13.16□□□□□ -0.3
GMDS-210ENST00000533279 SLC26A6Q9BXS9 759 aa13.16□□□□□ -0.3
GMDS-210ENST00000533279 RNF26Q9BY78 433 aaPredicted RBP13.16□□□□□ -0.3
GMDS-210ENST00000533279 NCOA5Q9HCD5 579 aaKnown RBP13.16□□□□□ -0.3
GMDS-210ENST00000533279 CWC22Q9HCG8 908 aaKnown RBP13.16□□□□□ -0.3
GMDS-210ENST00000533279 HPS5Q9UPZ3 1129 aa13.16□□□□□ -0.3
GMDS-210ENST00000533279 PHIPQ8WWQ0 1821 aa13.16□□□□□ -0.3
GMDS-210ENST00000533279 PTPDC1A2A3K4 754 aa13.15□□□□□ -0.3
GMDS-210ENST00000533279 hCG_1984214I3L0E3 225 aa13.15□□□□□ -0.3
GMDS-210ENST00000533279 PDHXO00330 501 aa13.15□□□□□ -0.3
GMDS-210ENST00000533279 DEXIO95424 95 aa13.15□□□□□ -0.3
GMDS-210ENST00000533279 HSPA6P17066 643 aa13.15□□□□□ -0.3
GMDS-210ENST00000533279 PDCP20941 246 aa13.15□□□□□ -0.3
GMDS-210ENST00000533279 HOXA7P31268 230 aaPredicted RBP13.15□□□□□ -0.3
GMDS-210ENST00000533279 BTNL9Q6UXG8 535 aa13.15□□□□□ -0.3
GMDS-210ENST00000533279 HOMER1Q86YM7 354 aa13.15□□□□□ -0.3
GMDS-210ENST00000533279 CCAR1Q8IX12 1150 aaKnown RBP13.15□□□□□ -0.3
GMDS-210ENST00000533279 CCDC82Q8N4S0 544 aa13.15□□□□□ -0.3
GMDS-210ENST00000533279 ZNF713Q8N859 430 aaPredicted RBP13.15□□□□□ -0.3
GMDS-210ENST00000533279 INTS4Q96HW7 963 aaKnown RBP13.15□□□□□ -0.3
GMDS-210ENST00000533279 UBA5Q9GZZ9 404 aa13.15□□□□□ -0.3
GMDS-210ENST00000533279 VAT1LQ9HCJ6 419 aa13.15□□□□□ -0.3
GMDS-210ENST00000533279 PPP1R9AQ9ULJ8 1098 aa13.15□□□□□ -0.3
GMDS-210ENST00000533279 LOC285556D6RIA3 1793 aa13.15□□□□□ -0.31
GMDS-210ENST00000533279 STK36Q9NRP7 1315 aa13.14□□□□□ -0.31
GMDS-210ENST00000533279 PLEKHA8P1O95397 391 aa13.14□□□□□ -0.31
GMDS-210ENST00000533279 CD2BP2O95400 341 aaKnown RBP13.14□□□□□ -0.31
GMDS-210ENST00000533279 LARGE1O95461 756 aa13.14□□□□□ -0.31
GMDS-210ENST00000533279 FMNL1O95466 1100 aaPredicted RBP13.14□□□□□ -0.31
GMDS-210ENST00000533279 PDIA4P13667 645 aaKnown RBP13.14□□□□□ -0.31
GMDS-210ENST00000533279 CDC27P30260 824 aa13.14□□□□□ -0.31
GMDS-210ENST00000533279 COPB2P35606 906 aa13.14□□□□□ -0.31
GMDS-210ENST00000533279 ADD1P35611 737 aaKnown RBP13.14□□□□□ -0.31
GMDS-210ENST00000533279 SLC16A2P36021 539 aa13.14□□□□□ -0.31
GMDS-210ENST00000533279 GCLCP48506 637 aaPredicted RBP13.14□□□□□ -0.31
GMDS-210ENST00000533279 TAF1CQ15572 869 aaPredicted RBP13.14□□□□□ -0.31
GMDS-210ENST00000533279 TREML2Q5T2D2 321 aa13.14□□□□□ -0.31
GMDS-210ENST00000533279 ADGRF4Q8IZF3 695 aa13.14□□□□□ -0.31
GMDS-210ENST00000533279 STAG2Q8N3U4 1231 aa13.14□□□□□ -0.31
GMDS-210ENST00000533279 CCDC148Q8NFR7 591 aa13.14□□□□□ -0.31
GMDS-210ENST00000533279 BRI3BPQ8WY22 251 aa13.14□□□□□ -0.31
GMDS-210ENST00000533279 MS4A4AQ96JQ5 239 aa13.14□□□□□ -0.31
GMDS-210ENST00000533279 BEGAINQ9BUH8 593 aa13.14□□□□□ -0.31
GMDS-210ENST00000533279 BRMS1Q9HCU9 246 aa13.14□□□□□ -0.31
GMDS-210ENST00000533279 ORC3Q9UBD5 711 aaPredicted RBP13.14□□□□□ -0.31
GMDS-210ENST00000533279 WDR33Q9C0J8 1336 aaKnown RBP13.13□□□□□ -0.31
GMDS-210ENST00000533279 TESPA1A2RU30 521 aaPredicted RBP13.13□□□□□ -0.31
GMDS-210ENST00000533279 BTBD19C9JJ37 291 aa13.13□□□□□ -0.31
GMDS-210ENST00000533279 ZBTB5O15062 677 aa13.13□□□□□ -0.31
GMDS-210ENST00000533279 DSG3P32926 999 aa13.13□□□□□ -0.31
GMDS-210ENST00000533279 MAP2K2P36507 400 aa13.13□□□□□ -0.31
GMDS-210ENST00000533279 CCNA1P78396 465 aa13.13□□□□□ -0.31
GMDS-210ENST00000533279 KIF23Q02241 960 aaPredicted RBP13.13□□□□□ -0.31
GMDS-210ENST00000533279 CUL4AQ13619 759 aa13.13□□□□□ -0.31
GMDS-210ENST00000533279 CDC37Q16543 378 aaPredicted RBP13.13□□□□□ -0.31
GMDS-210ENST00000533279 TTBK2Q6IQ55 1244 aa13.13□□□□□ -0.31
GMDS-210ENST00000533279 PIBF1Q8WXW3 757 aa13.13□□□□□ -0.31
GMDS-210ENST00000533279 ASCC2Q9H1I8 757 aaPredicted RBP13.13□□□□□ -0.31
GMDS-210ENST00000533279 ZFYVE28Q9HCC9 887 aa13.13□□□□□ -0.31
GMDS-210ENST00000533279 PRR12Q9ULL5 1215 aa13.13□□□□□ -0.31
GMDS-210ENST00000533279 CNTNAP5Q8WYK1 1306 aa13.13□□□□□ -0.31
GMDS-210ENST00000533279 PTPRFP10586 1907 aa13.12□□□□□ -0.31
GMDS-210ENST00000533279 PNMA6FA0A0J9YX94 578 aa13.12□□□□□ -0.31
GMDS-210ENST00000533279 FAM155AB1AL88 458 aaPredicted RBP13.12□□□□□ -0.31
GMDS-210ENST00000533279 PRPF3O43395 683 aaKnown RBP13.12□□□□□ -0.31
GMDS-210ENST00000533279 OAZ1P54368 228 aa13.12□□□□□ -0.31
GMDS-210ENST00000533279 HERVK_113P62684 666 aa13.12□□□□□ -0.31
GMDS-210ENST00000533279 DGKZQ13574 1117 aa13.12□□□□□ -0.31
GMDS-210ENST00000533279 GNL2Q13823 731 aaKnown RBP13.12□□□□□ -0.31
GMDS-210ENST00000533279 PLS1Q14651 629 aa13.12□□□□□ -0.31
GMDS-210ENST00000533279 SAFBQ15424 915 aaKnown RBP eCLIP13.12□□□□□ -0.31
GMDS-210ENST00000533279 KIAA1755Q5JYT7 1200 aa13.12□□□□□ -0.31
GMDS-210ENST00000533279 CCDC174Q6PII3 467 aa13.12□□□□□ -0.31
GMDS-210ENST00000533279 RASGRP2Q7LDG7 609 aa13.12□□□□□ -0.31
GMDS-210ENST00000533279 HEATR3Q7Z4Q2 680 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms