RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 MMP19Q99542 508 aa22.5■■□□□ 1.19
SSH3-209ENST00000532600 OSBPL3Q9H4L5 887 aa22.5■■□□□ 1.19
SSH3-209ENST00000532600 FGAP02671 866 aa22.49■■□□□ 1.19
SSH3-209ENST00000532600 CNGA1P29973 690 aa22.49■■□□□ 1.19
SSH3-209ENST00000532600 ZNF792Q3KQV3 632 aa22.49■■□□□ 1.19
SSH3-209ENST00000532600 SLFN13Q68D06 897 aa22.49■■□□□ 1.19
SSH3-209ENST00000532600 RASGRP2Q7LDG7 609 aa22.49■■□□□ 1.19
SSH3-209ENST00000532600 TICAM2Q86XR7 235 aa22.49■■□□□ 1.19
SSH3-209ENST00000532600 C7orf61Q8IZ16 206 aa22.49■■□□□ 1.19
SSH3-209ENST00000532600 PRPF38AQ8NAV1 312 aaKnown RBP22.49■■□□□ 1.19
SSH3-209ENST00000532600 TRIM6-TRIM34B2RNG4 842 aa22.48■■□□□ 1.19
SSH3-209ENST00000532600 ATP2A1O14983 1001 aa22.48■■□□□ 1.19
SSH3-209ENST00000532600 HSPD1P10809 573 aaKnown RBP22.48■■□□□ 1.19
SSH3-209ENST00000532600 NOVP48745 357 aa22.48■■□□□ 1.19
SSH3-209ENST00000532600 LRRC26Q2I0M4 334 aa22.48■■□□□ 1.19
SSH3-209ENST00000532600 SNRNP48Q6IEG0 339 aaKnown RBP22.48■■□□□ 1.19
SSH3-209ENST00000532600 KIFC2Q96AC6 838 aa22.48■■□□□ 1.19
SSH3-209ENST00000532600 TEX13BQ9BXU2 312 aa22.48■■□□□ 1.19
SSH3-209ENST00000532600 SLC38A10Q9HBR0 1119 aa22.48■■□□□ 1.19
SSH3-209ENST00000532600 ORC4O43929 436 aa22.47■■□□□ 1.19
SSH3-209ENST00000532600 ANO1Q5XXA6 986 aa22.47■■□□□ 1.19
SSH3-209ENST00000532600 RILPL2Q969X0 211 aa22.47■■□□□ 1.19
SSH3-209ENST00000532600 CHMP4CQ96CF2 233 aa22.47■■□□□ 1.19
SSH3-209ENST00000532600 FEM1BQ9UK73 627 aa22.47■■□□□ 1.19
SSH3-209ENST00000532600 ZMYND8Q9ULU4 1186 aaPredicted RBP22.47■■□□□ 1.19
SSH3-209ENST00000532600 MSCO60682 206 aa22.46■■□□□ 1.19
SSH3-209ENST00000532600 BMP3P12645 472 aa22.46■■□□□ 1.19
SSH3-209ENST00000532600 SDSP20132 328 aa22.46■■□□□ 1.19
SSH3-209ENST00000532600 KCTD2Q14681 263 aa22.46■■□□□ 1.19
SSH3-209ENST00000532600 RAVER2Q9HCJ3 691 aaKnown RBP22.46■■□□□ 1.19
SSH3-209ENST00000532600 SLC5A4Q9NY91 659 aa22.46■■□□□ 1.19
SSH3-209ENST00000532600 CCDC171Q6TFL3 1326 aa22.46■■□□□ 1.19
SSH3-209ENST00000532600 DNAJC25-GNG10A0A024R161 153 aa22.45■■□□□ 1.18
SSH3-209ENST00000532600 TSPY2A6NKD2 308 aa22.45■■□□□ 1.18
SSH3-209ENST00000532600 SEPT4O43236 478 aa22.45■■□□□ 1.18
SSH3-209ENST00000532600 TAL1P17542 331 aaPredicted RBP22.45■■□□□ 1.18
SSH3-209ENST00000532600 COPB2P35606 906 aa22.45■■□□□ 1.18
SSH3-209ENST00000532600 CPXCR1Q8N123 301 aa22.45■■□□□ 1.18
SSH3-209ENST00000532600 GMCL1Q96IK5 515 aa22.45■■□□□ 1.18
SSH3-209ENST00000532600 DIS3Q9Y2L1 958 aaKnown RBP22.45■■□□□ 1.18
SSH3-209ENST00000532600 ZMYM6O95789 1325 aa22.45■■□□□ 1.18
SSH3-209ENST00000532600 SMCHD1A6NHR9 2005 aa22.44■■□□□ 1.18
SSH3-209ENST00000532600 TMEM232C9JQI7 657 aa22.44■■□□□ 1.18
SSH3-209ENST00000532600 RANBP6O60518 1105 aaKnown RBP22.44■■□□□ 1.18
SSH3-209ENST00000532600 SYN1P17600 705 aa22.44■■□□□ 1.18
SSH3-209ENST00000532600 MCCP23508 829 aa22.44■■□□□ 1.18
SSH3-209ENST00000532600 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.44■■□□□ 1.18
SSH3-209ENST00000532600 TINF2Q9BSI4 451 aa22.44■■□□□ 1.18
SSH3-209ENST00000532600 STX8Q9UNK0 236 aa22.44■■□□□ 1.18
SSH3-209ENST00000532600 DNAH12Q6ZR08 3092 aa22.43■■□□□ 1.18
SSH3-209ENST00000532600 ZNF536O15090 1300 aa22.43■■□□□ 1.18
SSH3-209ENST00000532600 ZBED4O75132 1171 aa22.43■■□□□ 1.18
SSH3-209ENST00000532600 PDE4AP27815 886 aa22.43■■□□□ 1.18
SSH3-209ENST00000532600 HAND2P61296 217 aa22.43■■□□□ 1.18
SSH3-209ENST00000532600 GJC2Q5T442 439 aaPredicted RBP22.43■■□□□ 1.18
SSH3-209ENST00000532600 TBC1D10CQ8IV04 446 aa22.43■■□□□ 1.18
SSH3-209ENST00000532600 FGD4Q96M96 766 aa22.43■■□□□ 1.18
SSH3-209ENST00000532600 GDF15Q99988 308 aa22.43■■□□□ 1.18
SSH3-209ENST00000532600 SZT2Q5T011 3432 aa22.42■■□□□ 1.18
SSH3-209ENST00000532600 DNM1LO00429 736 aa22.42■■□□□ 1.18
SSH3-209ENST00000532600 ZNF865P0CJ78 1059 aaPredicted RBP22.42■■□□□ 1.18
SSH3-209ENST00000532600 SLC4A3P48751 1232 aa22.42■■□□□ 1.18
SSH3-209ENST00000532600 KCTD1Q719H9 257 aa22.42■■□□□ 1.18
SSH3-209ENST00000532600 STAG1Q8WVM7 1258 aa22.42■■□□□ 1.18
SSH3-209ENST00000532600 SENP6Q9GZR1 1112 aaPredicted RBP22.42■■□□□ 1.18
SSH3-209ENST00000532600 SLC1A4P43007 532 aa22.41■■□□□ 1.18
SSH3-209ENST00000532600 OAZ1P54368 228 aa22.41■■□□□ 1.18
SSH3-209ENST00000532600 NRBP1Q9UHY1 535 aa22.41■■□□□ 1.18
SSH3-209ENST00000532600 LAMA4Q16363 1823 aa22.41■■□□□ 1.18
SSH3-209ENST00000532600 PLA2G6O60733 806 aa22.4■■□□□ 1.18
SSH3-209ENST00000532600 SNAI1O95863 264 aaPredicted RBP22.4■■□□□ 1.18
SSH3-209ENST00000532600 STAT2P52630 851 aa22.4■■□□□ 1.18
SSH3-209ENST00000532600 SNAP25P60880 206 aa22.4■■□□□ 1.18
SSH3-209ENST00000532600 RRP12Q5JTH9 1297 aaKnown RBP22.4■■□□□ 1.18
SSH3-209ENST00000532600 RCSD1Q6JBY9 416 aa22.4■■□□□ 1.18
SSH3-209ENST00000532600 LENG1Q96BZ8 264 aaPredicted RBP22.4■■□□□ 1.18
SSH3-209ENST00000532600 AGBL1Q96MI9 1066 aa22.4■■□□□ 1.18
SSH3-209ENST00000532600 IL25Q9H293 177 aa22.4■■□□□ 1.18
SSH3-209ENST00000532600 ATN1P54259 1190 aaPredicted RBP22.39■■□□□ 1.17
SSH3-209ENST00000532600 LRRC41Q15345 812 aa22.39■■□□□ 1.17
SSH3-209ENST00000532600 CWC27Q6UX04 472 aaKnown RBP22.39■■□□□ 1.17
SSH3-209ENST00000532600 MAMDC4Q6UXC1 1216 aa22.39■■□□□ 1.17
SSH3-209ENST00000532600 FAM160B2Q86V87 743 aa22.39■■□□□ 1.17
SSH3-209ENST00000532600 TMEM47Q9BQJ4 181 aa22.39■■□□□ 1.17
SSH3-209ENST00000532600 TCP11L1Q9NUJ3 509 aa22.39■■□□□ 1.17
SSH3-209ENST00000532600 NEDD4P46934 1319 aa22.38■■□□□ 1.17
SSH3-209ENST00000532600 MAGEA10P43363 369 aaPredicted RBP22.38■■□□□ 1.17
SSH3-209ENST00000532600 PPP4R3BQ5MIZ7 849 aa22.38■■□□□ 1.17
SSH3-209ENST00000532600 AKNAD1Q5T1N1 836 aa22.38■■□□□ 1.17
SSH3-209ENST00000532600 ERICH6BQ5W0A0 696 aa22.38■■□□□ 1.17
SSH3-209ENST00000532600 TTBK2Q6IQ55 1244 aa22.38■■□□□ 1.17
SSH3-209ENST00000532600 CHST13Q8NET6 341 aa22.38■■□□□ 1.17
SSH3-209ENST00000532600 CHURC1Q8WUH1 139 aa22.38■■□□□ 1.17
SSH3-209ENST00000532600 DDX11Q96FC9 970 aa22.38■■□□□ 1.17
SSH3-209ENST00000532600 TOMM22Q9NS69 142 aa22.38■■□□□ 1.17
SSH3-209ENST00000532600 HOMER2Q9NSB8 354 aa22.38■■□□□ 1.17
SSH3-209ENST00000532600 PRR12Q9ULL5 1215 aa22.38■■□□□ 1.17
SSH3-209ENST00000532600 MTMR7Q9Y216 660 aa22.38■■□□□ 1.17
SSH3-209ENST00000532600 MCM3APO60318 1980 aa22.38■■□□□ 1.17
SSH3-209ENST00000532600 SOX1O00570 391 aaPredicted RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms