RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 UQCRFS1P1P0C7P4 283 aa7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 ATP11AP98196 1134 aa7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 RASGRF1Q13972 1273 aa7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 FOXR1Q6PIV2 292 aa7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 TGFBRAP1Q8WUH2 860 aa7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 RPGRIP1Q96KN7 1286 aa7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 PPP1R12CQ9BZL4 782 aa7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 NSRP1Q9H0G5 558 aaKnown RBP7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 COPRSQ9NQ92 184 aa7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 BSDC1Q9NW68 430 aaPredicted RBP7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 MAGEC2Q9UBF1 373 aaPredicted RBP7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 TPX2Q9ULW0 747 aaKnown RBP7.57□□□□□ -1.2
TGFBR3-209ENST00000532540 XDHP47989 1333 aa7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 A0A1B0GVL5 298 aa7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 H3BQF6 201 aa7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 MEFVO15553 781 aaPredicted RBP7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 RXRAP19793 462 aa7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 KCNJ6P48051 423 aa7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 DYNLL1P63167 89 aaKnown RBP7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 CCDC6Q16204 474 aa7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 EVI5LQ96CN4 794 aa7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 VAT1LQ9HCJ6 419 aa7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 PPANQ9NQ55 473 aaKnown RBP7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 COL16A1Q07092 1604 aaPredicted RBP7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 PRPHP41219 470 aa7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 GSCP56915 257 aaPredicted RBP7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 GNPTABQ3T906 1256 aa7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 ATL3Q6DD88 541 aa7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 PARP9Q8IXQ6 854 aa7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 LUC7LQ9NQ29 371 aaKnown RBP7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 CTDP1Q9Y5B0 961 aaPredicted RBP7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 MROH5Q6ZUA9 1318 aa7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 ZNF532Q9HCE3 1301 aa7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 CYP2D7A0A087X1C5 515 aa7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 ERICH2A1L162 156 aa7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 MYO1FO00160 1098 aa7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 SGSM2O43147 1006 aa7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 NLRP12P59046 1061 aa7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 TSNAXIP1Q2TAA8 658 aa7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 MIGA2Q7L4E1 593 aa7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 C8orf76Q96K31 380 aa7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 IFT74Q96LB3 600 aa7.56□□□□□ -1.2
TGFBR3-209ENST00000532540 RGPD5Q99666 1765 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 MAGEB6P1A0A0J9YX57 407 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 PRKAB2O43741 272 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 KRT86O43790 486 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 MYO1BO43795 1136 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 SRGNP10124 158 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 MYO1EQ12965 1108 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 DPY19L2Q6NUT2 758 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 RUFY3Q7L099 469 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 CNGA4Q8IV77 575 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 SAMD15Q9P1V8 674 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 AHDC1Q5TGY3 1603 aaPredicted RBP7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 AK9Q5TCS8 1911 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 CREB3O43889 395 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 PFDN1O60925 122 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 SASH3O75995 380 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 CPP00450 1065 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 DLGAP5Q15398 846 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 TRIM68Q6AZZ1 485 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 HIBCHQ6NVY1 386 aaPredicted RBP7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 CCDC63Q8NA47 563 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 TRIM58Q8NG06 486 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 TCP11Q8WWU5 503 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 FUCA2Q9BTY2 467 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 HMG20BQ9P0W2 317 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 KIAA1468Q9P260 1216 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 HDAC9Q9UKV0 1011 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 N4BP3O15049 544 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 CUTAO60888 179 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 RPS6KA5O75582 802 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 BAG3O95817 575 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 ATP2B4P23634 1241 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 ADKP55263 362 aaKnown RBP7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 CCT2P78371 535 aaKnown RBP7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 SH2D4BQ5SQS7 431 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 ZNF365Q70YC5 407 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 TBC1D16Q8TBP0 767 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 SYT17Q9BSW7 474 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 CCDC113Q9H0I3 377 aa7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 NOP53Q9NZM5 478 aaKnown RBP7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 LUC7L2Q9Y383 392 aaKnown RBP7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 RBM8AQ9Y5S9 174 aaKnown RBP7.55□□□□□ -1.2
TGFBR3-209ENST00000532540 ZNF213O14771 459 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 SPTLC2O15270 562 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 N4BP1O75113 896 aaKnown RBP7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 MCAMP43121 646 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 ADCY2Q08462 1091 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 TRIM28Q13263 835 aaKnown RBP7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 GKAP1Q5VSY0 366 aaPredicted RBP7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 CEP128Q6ZU80 1094 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 TRMT1LQ7Z2T5 733 aaKnown RBP7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 ATG9AQ7Z3C6 839 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 HNRNPLLQ8WVV9 542 aaKnown RBP7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 TAF4BQ92750 862 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 AKT1S1Q96B36 256 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 ALS2CR12Q96Q35 445 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 CTAGE1Q96RT6 745 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 USP40Q9NVE5 1235 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms