RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 JAG1P78504 1218 aa17.32■□□□□ 0.36
SRPRA-206ENST00000532259 ARID5BQ14865 1188 aa17.32■□□□□ 0.36
SRPRA-206ENST00000532259 FILIP1Q7Z7B0 1213 aa17.32■□□□□ 0.36
SRPRA-206ENST00000532259 RRP36Q96EU6 259 aaKnown RBP17.32■□□□□ 0.36
SRPRA-206ENST00000532259 SH3GLB2Q9NR46 395 aa17.32■□□□□ 0.36
SRPRA-206ENST00000532259 SEC63Q9UGP8 760 aaKnown RBP17.32■□□□□ 0.36
SRPRA-206ENST00000532259 ATF5Q9Y2D1 282 aaPredicted RBP17.32■□□□□ 0.36
SRPRA-206ENST00000532259 CLRN2A0PK11 232 aa17.32■□□□□ 0.36
SRPRA-206ENST00000532259 GOLGA6L6A8MZA4 724 aa17.32■□□□□ 0.36
SRPRA-206ENST00000532259 ZNF500O60304 480 aaPredicted RBP17.32■□□□□ 0.36
SRPRA-206ENST00000532259 PTPN21Q16825 1174 aa17.32■□□□□ 0.36
SRPRA-206ENST00000532259 TMEM60Q9H2L4 133 aa17.32■□□□□ 0.36
SRPRA-206ENST00000532259 SWAP70Q9UH65 585 aa17.32■□□□□ 0.36
SRPRA-206ENST00000532259 SERPINA10Q9UK55 444 aa17.32■□□□□ 0.36
SRPRA-206ENST00000532259 SMCO2A6NFE2 343 aa17.31■□□□□ 0.36
SRPRA-206ENST00000532259 PSMD14O00487 310 aa17.31■□□□□ 0.36
SRPRA-206ENST00000532259 SMC2O95347 1197 aa17.31■□□□□ 0.36
SRPRA-206ENST00000532259 ATP1A3P13637 1013 aa17.31■□□□□ 0.36
SRPRA-206ENST00000532259 LARGE2Q8N3Y3 721 aa17.31■□□□□ 0.36
SRPRA-206ENST00000532259 C4orf32Q8N8J7 132 aa17.31■□□□□ 0.36
SRPRA-206ENST00000532259 IDI2Q9BXS1 227 aa17.31■□□□□ 0.36
SRPRA-206ENST00000532259 FKBP1AP62942 108 aaKnown RBP17.31■□□□□ 0.36
SRPRA-206ENST00000532259 RRP1BQ14684 758 aaKnown RBP17.31■□□□□ 0.36
SRPRA-206ENST00000532259 NCAPHQ15003 741 aa17.31■□□□□ 0.36
SRPRA-206ENST00000532259 CCDC96Q2M329 555 aa17.31■□□□□ 0.36
SRPRA-206ENST00000532259 ILDR2Q71H61 639 aa17.31■□□□□ 0.36
SRPRA-206ENST00000532259 LZTS2Q9BRK4 669 aa17.31■□□□□ 0.36
SRPRA-206ENST00000532259 TMEM260Q9NX78 707 aa17.31■□□□□ 0.36
SRPRA-206ENST00000532259 BIN2Q9UBW5 565 aaPredicted RBP17.31■□□□□ 0.36
SRPRA-206ENST00000532259 MAN1B1Q9UKM7 699 aa17.31■□□□□ 0.36
SRPRA-206ENST00000532259 SCAF8Q9UPN6 1271 aaKnown RBP17.31■□□□□ 0.36
SRPRA-206ENST00000532259 CCDC93Q567U6 631 aa17.3■□□□□ 0.36
SRPRA-206ENST00000532259 JAKMIP3Q5VZ66 844 aa17.3■□□□□ 0.36
SRPRA-206ENST00000532259 CCDC148Q8NFR7 591 aa17.3■□□□□ 0.36
SRPRA-206ENST00000532259 PLIN2Q99541 437 aa17.3■□□□□ 0.36
SRPRA-206ENST00000532259 MRIQ9BWK5 157 aa17.3■□□□□ 0.36
SRPRA-206ENST00000532259 RIOX1Q9H6W3 641 aa17.3■□□□□ 0.36
SRPRA-206ENST00000532259 PP2D1A8MPX8 630 aa17.3■□□□□ 0.36
SRPRA-206ENST00000532259 TCP10L2B9ZVM9 353 aa17.3■□□□□ 0.36
SRPRA-206ENST00000532259 PPP1R11O60927 126 aaPredicted RBP17.3■□□□□ 0.36
SRPRA-206ENST00000532259 SNHG28P0DPA3 235 aa17.3■□□□□ 0.36
SRPRA-206ENST00000532259 SEPT2Q15019 361 aa17.3■□□□□ 0.36
SRPRA-206ENST00000532259 CERKLQ49MI3 558 aaPredicted RBP17.3■□□□□ 0.36
SRPRA-206ENST00000532259 SIAH1Q8IUQ4 282 aa17.3■□□□□ 0.36
SRPRA-206ENST00000532259 CDAN1Q8IWY9 1227 aa17.3■□□□□ 0.36
SRPRA-206ENST00000532259 SMARCE1Q969G3 411 aa17.3■□□□□ 0.36
SRPRA-206ENST00000532259 FERMT2Q96AC1 680 aa17.3■□□□□ 0.36
SRPRA-206ENST00000532259 ZMYND12Q9H0C1 365 aa17.3■□□□□ 0.36
SRPRA-206ENST00000532259 HSD3B7Q9H2F3 369 aa17.3■□□□□ 0.36
SRPRA-206ENST00000532259 IFNKQ9P0W0 207 aa17.3■□□□□ 0.36
SRPRA-206ENST00000532259 PI4KBQ9UBF8 816 aa17.3■□□□□ 0.36
SRPRA-206ENST00000532259 PPP1R1BQ9UD71 204 aaPredicted RBP17.3■□□□□ 0.36
SRPRA-206ENST00000532259 EEF2P13639 858 aaKnown RBP17.29■□□□□ 0.36
SRPRA-206ENST00000532259 HDLBPQ00341 1268 aaKnown RBP17.29■□□□□ 0.36
SRPRA-206ENST00000532259 ZNF543Q08ER8 600 aa17.29■□□□□ 0.36
SRPRA-206ENST00000532259 LETM2Q2VYF4 491 aa17.29■□□□□ 0.36
SRPRA-206ENST00000532259 TRMT44Q8IYL2 757 aaKnown RBP17.29■□□□□ 0.36
SRPRA-206ENST00000532259 ADGRF4Q8IZF3 695 aa17.29■□□□□ 0.36
SRPRA-206ENST00000532259 TRIM34Q9BYJ4 488 aa17.29■□□□□ 0.36
SRPRA-206ENST00000532259 CC2D2BQ6DHV5 1058 aa17.29■□□□□ 0.36
SRPRA-206ENST00000532259 SUPT20HQ8NEM7 779 aa17.29■□□□□ 0.36
SRPRA-206ENST00000532259 UPF1Q92900 1129 aaKnown RBP eCLIP17.29■□□□□ 0.363e-6■■■■□ 22.4
SRPRA-206ENST00000532259 EHD4Q9H223 541 aa17.29■□□□□ 0.36
SRPRA-206ENST00000532259 BLZF1Q9H2G9 400 aa17.29■□□□□ 0.36
SRPRA-206ENST00000532259 JMJD4Q9H9V9 463 aa17.29■□□□□ 0.36
SRPRA-206ENST00000532259 HOOK1Q9UJC3 728 aaKnown RBP17.29■□□□□ 0.36
SRPRA-206ENST00000532259 USP17L10C9JJH3 530 aa17.28■□□□□ 0.36
SRPRA-206ENST00000532259 TRAPPC10P48553 1259 aa17.28■□□□□ 0.36
SRPRA-206ENST00000532259 SOGA3Q5TF21 947 aa17.28■□□□□ 0.36
SRPRA-206ENST00000532259 SARM1Q6SZW1 724 aa17.28■□□□□ 0.36
SRPRA-206ENST00000532259 XPO4Q9C0E2 1151 aaKnown RBP17.28■□□□□ 0.36
SRPRA-206ENST00000532259 SHTN1A0MZ66 631 aa17.28■□□□□ 0.36
SRPRA-206ENST00000532259 BMP15O95972 392 aa17.28■□□□□ 0.36
SRPRA-206ENST00000532259 DNTTIP2Q5QJE6 756 aaKnown RBP17.28■□□□□ 0.36
SRPRA-206ENST00000532259 SMYD4Q8IYR2 804 aaPredicted RBP17.28■□□□□ 0.36
SRPRA-206ENST00000532259 DAGLBQ8NCG7 672 aa17.28■□□□□ 0.36
SRPRA-206ENST00000532259 DHX36Q9H2U1 1008 aaKnown RBP17.28■□□□□ 0.36
SRPRA-206ENST00000532259 MYH4Q9Y623 1939 aa17.28■□□□□ 0.36
SRPRA-206ENST00000532259 CCNT1O60563 726 aaKnown RBP17.27■□□□□ 0.36
SRPRA-206ENST00000532259 COBLO75128 1261 aa17.27■□□□□ 0.36
SRPRA-206ENST00000532259 ASPRV1Q53RT3 343 aa17.27■□□□□ 0.36
SRPRA-206ENST00000532259 RSBN1LQ6PCB5 846 aaPredicted RBP17.27■□□□□ 0.36
SRPRA-206ENST00000532259 CACTINQ8WUQ7 758 aaKnown RBP17.27■□□□□ 0.36
SRPRA-206ENST00000532259 PAGE5Q96GU1 130 aa17.27■□□□□ 0.36
SRPRA-206ENST00000532259 NUP88Q99567 741 aaPredicted RBP17.27■□□□□ 0.36
SRPRA-206ENST00000532259 R3HCC1Q9Y3T6 440 aaKnown RBP17.27■□□□□ 0.36
SRPRA-206ENST00000532259 SNAP25P60880 206 aa17.27■□□□□ 0.35
SRPRA-206ENST00000532259 NOLC1Q14978 699 aaKnown RBP eCLIP17.27■□□□□ 0.35
SRPRA-206ENST00000532259 KARSQ15046 597 aaKnown RBP17.27■□□□□ 0.35
SRPRA-206ENST00000532259 KLHL10Q6JEL2 608 aa17.27■□□□□ 0.35
SRPRA-206ENST00000532259 RTKN2Q8IZC4 609 aa17.27■□□□□ 0.35
SRPRA-206ENST00000532259 RASSF8Q8NHQ8 419 aa17.27■□□□□ 0.35
SRPRA-206ENST00000532259 CSRNP1Q96S65 589 aa17.27■□□□□ 0.35
SRPRA-206ENST00000532259 FANCLQ9NW38 375 aa17.27■□□□□ 0.35
SRPRA-206ENST00000532259 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.27■□□□□ 0.35
SRPRA-206ENST00000532259 SARSP49591 514 aaKnown RBP17.26■□□□□ 0.35
SRPRA-206ENST00000532259 FMR1Q06787 632 aaKnown RBP eCLIP17.26■□□□□ 0.352e-7■■□□□ 13.9
SRPRA-206ENST00000532259 MTRQ99707 1265 aa17.26■□□□□ 0.35
SRPRA-206ENST00000532259 BPIFA3Q9BQP9 254 aa17.26■□□□□ 0.35
SRPRA-206ENST00000532259 C6orf50Q9HD87 102 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms