RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 SLC25A27O95847 323 aa12.73□□□□□ -0.37
GPATCH4-216ENST00000531900 IGHA2P01877 340 aa12.73□□□□□ -0.37
GPATCH4-216ENST00000531900 TFRCP02786 760 aaKnown RBP12.73□□□□□ -0.37
GPATCH4-216ENST00000531900 PTPREP23469 700 aa12.73□□□□□ -0.37
GPATCH4-216ENST00000531900 COPB2P35606 906 aa12.73□□□□□ -0.37
GPATCH4-216ENST00000531900 SLC1A4P43007 532 aa12.73□□□□□ -0.37
GPATCH4-216ENST00000531900 OAZ1P54368 228 aa12.73□□□□□ -0.37
GPATCH4-216ENST00000531900 GRB14Q14449 540 aa12.73□□□□□ -0.37
GPATCH4-216ENST00000531900 NECTIN1Q15223 517 aa12.73□□□□□ -0.37
GPATCH4-216ENST00000531900 BTNL9Q6UXG8 535 aa12.73□□□□□ -0.37
GPATCH4-216ENST00000531900 KIAA1211Q6ZU35 1233 aa12.73□□□□□ -0.37
GPATCH4-216ENST00000531900 FAM160B2Q86V87 743 aa12.73□□□□□ -0.37
GPATCH4-216ENST00000531900 TRMT44Q8IYL2 757 aaKnown RBP12.73□□□□□ -0.37
GPATCH4-216ENST00000531900 CHURC1Q8WUH1 139 aa12.73□□□□□ -0.37
GPATCH4-216ENST00000531900 DCAF4Q8WV16 495 aa12.73□□□□□ -0.37
GPATCH4-216ENST00000531900 DPF3Q92784 378 aa12.73□□□□□ -0.37
GPATCH4-216ENST00000531900 NUP88Q99567 741 aaPredicted RBP12.73□□□□□ -0.37
GPATCH4-216ENST00000531900 SLC38A10Q9HBR0 1119 aa12.73□□□□□ -0.37
GPATCH4-216ENST00000531900 CWC22Q9HCG8 908 aaKnown RBP12.73□□□□□ -0.37
GPATCH4-216ENST00000531900 B4E1Z4 1266 aa12.72□□□□□ -0.37
GPATCH4-216ENST00000531900 HMGCRP04035 888 aa12.72□□□□□ -0.37
GPATCH4-216ENST00000531900 MCCP23508 829 aa12.72□□□□□ -0.37
GPATCH4-216ENST00000531900 STAT3P40763 770 aa12.72□□□□□ -0.37
GPATCH4-216ENST00000531900 STAT2P52630 851 aa12.72□□□□□ -0.37
GPATCH4-216ENST00000531900 DEFB118Q96PH6 123 aa12.72□□□□□ -0.37
GPATCH4-216ENST00000531900 ZSCAN10Q96SZ4 725 aaPredicted RBP12.72□□□□□ -0.37
GPATCH4-216ENST00000531900 MTA3Q9BTC8 594 aa12.72□□□□□ -0.37
GPATCH4-216ENST00000531900 RBM8AQ9Y5S9 174 aaKnown RBP12.72□□□□□ -0.37
GPATCH4-216ENST00000531900 TMEM232C9JQI7 657 aa12.71□□□□□ -0.37
GPATCH4-216ENST00000531900 E7EWF7 191 aa12.71□□□□□ -0.37
GPATCH4-216ENST00000531900 FARP2O94887 1054 aaPredicted RBP12.71□□□□□ -0.37
GPATCH4-216ENST00000531900 PDHBP11177 359 aa12.71□□□□□ -0.37
GPATCH4-216ENST00000531900 ERCC3P19447 782 aa12.71□□□□□ -0.37
GPATCH4-216ENST00000531900 RGS2P41220 211 aa12.71□□□□□ -0.37
GPATCH4-216ENST00000531900 TRDNQ13061 729 aa12.71□□□□□ -0.37
GPATCH4-216ENST00000531900 MAP2K5Q13163 448 aa12.71□□□□□ -0.37
GPATCH4-216ENST00000531900 SEC23AQ15436 765 aa12.71□□□□□ -0.37
GPATCH4-216ENST00000531900 MAP3K21Q5TCX8 1036 aa12.71□□□□□ -0.37
GPATCH4-216ENST00000531900 CASC1Q6TDU7 716 aa12.71□□□□□ -0.37
GPATCH4-216ENST00000531900 ENAHQ8N8S7 591 aaPredicted RBP12.71□□□□□ -0.37
GPATCH4-216ENST00000531900 TEX13BQ9BXU2 312 aa12.71□□□□□ -0.37
GPATCH4-216ENST00000531900 HMX1Q9NP08 348 aaPredicted RBP12.71□□□□□ -0.37
GPATCH4-216ENST00000531900 PAK6Q9NQU5 681 aaPredicted RBP12.71□□□□□ -0.37
GPATCH4-216ENST00000531900 SMCHD1A6NHR9 2005 aa12.71□□□□□ -0.38
GPATCH4-216ENST00000531900 RPTORQ8N122 1335 aa12.7□□□□□ -0.38
GPATCH4-216ENST00000531900 EPB41L2O43491 1005 aaKnown RBP12.7□□□□□ -0.38
GPATCH4-216ENST00000531900 RAD21O60216 631 aa12.7□□□□□ -0.38
GPATCH4-216ENST00000531900 ZBED4O75132 1171 aa12.7□□□□□ -0.38
GPATCH4-216ENST00000531900 CYP2B6P20813 491 aa12.7□□□□□ -0.38
GPATCH4-216ENST00000531900 TSGA10IPQ3SY00 556 aa12.7□□□□□ -0.38
GPATCH4-216ENST00000531900 STOX1Q6ZVD7 989 aa12.7□□□□□ -0.38
GPATCH4-216ENST00000531900 UBE2Q1Q7Z7E8 422 aa12.7□□□□□ -0.38
GPATCH4-216ENST00000531900 NCOA7Q8NI08 942 aa12.7□□□□□ -0.38
GPATCH4-216ENST00000531900 APBA2Q99767 749 aa12.7□□□□□ -0.38
GPATCH4-216ENST00000531900 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.7□□□□□ -0.38
GPATCH4-216ENST00000531900 TAF6LQ9Y6J9 622 aa12.7□□□□□ -0.38
GPATCH4-216ENST00000531900 IVNS1ABPQ9Y6Y0 642 aa12.7□□□□□ -0.38
GPATCH4-216ENST00000531900 ZNF536O15090 1300 aa12.69□□□□□ -0.38
GPATCH4-216ENST00000531900 TNKSO95271 1327 aa12.69□□□□□ -0.38
GPATCH4-216ENST00000531900 DNAH12Q6ZR08 3092 aa12.69□□□□□ -0.38
GPATCH4-216ENST00000531900 ZNF543Q08ER8 600 aa12.69□□□□□ -0.38
GPATCH4-216ENST00000531900 HABP4Q5JVS0 413 aaKnown RBP12.69□□□□□ -0.38
GPATCH4-216ENST00000531900 GPATCH4Q5T3I0 446 aaKnown RBP12.69□□□□□ -0.38
GPATCH4-216ENST00000531900 KCTD1Q719H9 257 aa12.69□□□□□ -0.38
GPATCH4-216ENST00000531900 CYB5R4Q7L1T6 521 aa12.69□□□□□ -0.38
GPATCH4-216ENST00000531900 MB21D2Q8IYB1 491 aaPredicted RBP12.69□□□□□ -0.38
GPATCH4-216ENST00000531900 PNMA1Q8ND90 353 aa12.69□□□□□ -0.38
GPATCH4-216ENST00000531900 TRIB2Q92519 343 aa12.69□□□□□ -0.38
GPATCH4-216ENST00000531900 ZKSCAN3Q9BRR0 538 aa12.69□□□□□ -0.38
GPATCH4-216ENST00000531900 PRR12Q9ULL5 1215 aa12.69□□□□□ -0.38
GPATCH4-216ENST00000531900 DIS3Q9Y2L1 958 aaKnown RBP12.69□□□□□ -0.38
GPATCH4-216ENST00000531900 NR2E3Q9Y5X4 410 aa12.69□□□□□ -0.38
GPATCH4-216ENST00000531900 PLXNA1Q9UIW2 1896 aa12.68□□□□□ -0.38
GPATCH4-216ENST00000531900 H0YGN5 161 aa12.68□□□□□ -0.38
GPATCH4-216ENST00000531900 SLC27A2O14975 620 aa12.68□□□□□ -0.38
GPATCH4-216ENST00000531900 FCER1AP12319 257 aa12.68□□□□□ -0.38
GPATCH4-216ENST00000531900 ADORA2AP29274 412 aa12.68□□□□□ -0.38
GPATCH4-216ENST00000531900 PLS1Q14651 629 aa12.68□□□□□ -0.38
GPATCH4-216ENST00000531900 TKFCQ3LXA3 575 aa12.68□□□□□ -0.38
GPATCH4-216ENST00000531900 OLFML2BQ68BL8 750 aa12.68□□□□□ -0.38
GPATCH4-216ENST00000531900 CREB3L3Q68CJ9 461 aa12.68□□□□□ -0.38
GPATCH4-216ENST00000531900 NCAPG2Q86XI2 1143 aa12.68□□□□□ -0.38
GPATCH4-216ENST00000531900 ANKLE1Q8NAG6 615 aa12.68□□□□□ -0.38
GPATCH4-216ENST00000531900 CHST13Q8NET6 341 aa12.68□□□□□ -0.38
GPATCH4-216ENST00000531900 KCNB2Q92953 911 aa12.68□□□□□ -0.38
GPATCH4-216ENST00000531900 KIFC2Q96AC6 838 aa12.68□□□□□ -0.38
GPATCH4-216ENST00000531900 UBAC1Q9BSL1 405 aa12.68□□□□□ -0.38
GPATCH4-216ENST00000531900 CRISPLD2Q9H0B8 497 aa12.68□□□□□ -0.38
GPATCH4-216ENST00000531900 RANBP17Q9H2T7 1088 aaKnown RBP12.68□□□□□ -0.38
GPATCH4-216ENST00000531900 ANO2Q9NQ90 1003 aa12.68□□□□□ -0.38
GPATCH4-216ENST00000531900 SLC5A4Q9NY91 659 aa12.68□□□□□ -0.38
GPATCH4-216ENST00000531900 PNMA2Q9UL42 364 aa12.68□□□□□ -0.38
GPATCH4-216ENST00000531900 RIPK3Q9Y572 518 aa12.68□□□□□ -0.38
GPATCH4-216ENST00000531900 COBLO75128 1261 aa12.67□□□□□ -0.38
GPATCH4-216ENST00000531900 ZKSCAN1P17029 563 aaPredicted RBP12.67□□□□□ -0.38
GPATCH4-216ENST00000531900 WDR78Q5VTH9 848 aa12.67□□□□□ -0.38
GPATCH4-216ENST00000531900 RNF20Q5VTR2 975 aa12.67□□□□□ -0.38
GPATCH4-216ENST00000531900 SNRNP48Q6IEG0 339 aaKnown RBP12.67□□□□□ -0.38
GPATCH4-216ENST00000531900 RASGRP2Q7LDG7 609 aa12.67□□□□□ -0.38
GPATCH4-216ENST00000531900 NECAB2Q7Z6G3 386 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms