RNA–Protein interactions for RNA: ENST00000531502.5

CTSB-221, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-221ENST00000531502 CDH23Q9H251 3354 aa17.27■□□□□ 0.35
CTSB-221ENST00000531502 IGKV6D-41A0A0C4DH26 115 aa17.26■□□□□ 0.35
CTSB-221ENST00000531502 SMARCA5O60264 1052 aaPredicted RBP17.26■□□□□ 0.35
CTSB-221ENST00000531502 MAMDC4Q6UXC1 1216 aa17.26■□□□□ 0.35
CTSB-221ENST00000531502 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.26■□□□□ 0.35
CTSB-221ENST00000531502 ANKRD33Q7Z3H0 272 aa17.26■□□□□ 0.35
CTSB-221ENST00000531502 TOX2Q96NM4 488 aa17.26■□□□□ 0.35
CTSB-221ENST00000531502 TEX13BQ9BXU2 312 aa17.26■□□□□ 0.35
CTSB-221ENST00000531502 LRRCC1Q9C099 1032 aa17.26■□□□□ 0.35
CTSB-221ENST00000531502 SYNGAP1Q96PV0 1343 aa17.25■□□□□ 0.35
CTSB-221ENST00000531502 SYNRGQ9UMZ2 1314 aa17.25■□□□□ 0.35
CTSB-221ENST00000531502 F5H6K3 240 aa17.25■□□□□ 0.35
CTSB-221ENST00000531502 ATP2A1O14983 1001 aa17.25■□□□□ 0.35
CTSB-221ENST00000531502 RAD21O60216 631 aa17.25■□□□□ 0.35
CTSB-221ENST00000531502 PQBP1O60828 265 aaKnown RBP17.25■□□□□ 0.35
CTSB-221ENST00000531502 NDUFB10O96000 172 aa17.25■□□□□ 0.35
CTSB-221ENST00000531502 ACLYP53396 1101 aa17.25■□□□□ 0.35
CTSB-221ENST00000531502 KLRC3Q07444 240 aa17.25■□□□□ 0.35
CTSB-221ENST00000531502 FAAP100Q0VG06 881 aa17.25■□□□□ 0.35
CTSB-221ENST00000531502 SNRNP48Q6IEG0 339 aaKnown RBP17.25■□□□□ 0.35
CTSB-221ENST00000531502 GIMAP6Q6P9H5 292 aa17.25■□□□□ 0.35
CTSB-221ENST00000531502 MYLIPQ8WY64 445 aa17.25■□□□□ 0.35
CTSB-221ENST00000531502 OSBP2Q969R2 916 aa17.25■□□□□ 0.35
CTSB-221ENST00000531502 CNPY2Q9Y2B0 182 aa17.25■□□□□ 0.35
CTSB-221ENST00000531502 VCANP13611 3396 aa17.25■□□□□ 0.35
CTSB-221ENST00000531502 PRUNE2Q8WUY3 3088 aa17.24■□□□□ 0.35
CTSB-221ENST00000531502 MYH4Q9Y623 1939 aa17.24■□□□□ 0.35
CTSB-221ENST00000531502 RAG1P15918 1043 aa17.24■□□□□ 0.35
CTSB-221ENST00000531502 PRPF38AQ8NAV1 312 aaKnown RBP17.24■□□□□ 0.35
CTSB-221ENST00000531502 MAFAQ8NHW3 353 aaPredicted RBP17.24■□□□□ 0.35
CTSB-221ENST00000531502 FGD4Q96M96 766 aa17.24■□□□□ 0.35
CTSB-221ENST00000531502 CHMP4BQ9H444 224 aaKnown RBP17.24■□□□□ 0.35
CTSB-221ENST00000531502 EPB41L4AQ9HCS5 686 aaPredicted RBP17.24■□□□□ 0.35
CTSB-221ENST00000531502 MCM3APO60318 1980 aa17.23■□□□□ 0.35
CTSB-221ENST00000531502 TMEM265A0A087WTH1 108 aa17.23■□□□□ 0.35
CTSB-221ENST00000531502 MYADML2A6NDP7 307 aa17.23■□□□□ 0.35
CTSB-221ENST00000531502 ADCY6O43306 1168 aa17.23■□□□□ 0.35
CTSB-221ENST00000531502 IRX5P78411 483 aaPredicted RBP17.23■□□□□ 0.35
CTSB-221ENST00000531502 KCNA10Q16322 511 aa17.23■□□□□ 0.35
CTSB-221ENST00000531502 ZNF467Q7Z7K2 595 aaPredicted RBP17.23■□□□□ 0.35
CTSB-221ENST00000531502 STK11IPQ8N1F8 1099 aa17.23■□□□□ 0.35
CTSB-221ENST00000531502 KBTBD3Q8NAB2 608 aa17.23■□□□□ 0.35
CTSB-221ENST00000531502 MKL1Q969V6 931 aa17.23■□□□□ 0.35
CTSB-221ENST00000531502 RNPC3Q96LT9 517 aaKnown RBP17.23■□□□□ 0.35
CTSB-221ENST00000531502 MKNK2Q9HBH9 465 aa17.23■□□□□ 0.35
CTSB-221ENST00000531502 STARD7Q9NQZ5 370 aa17.23■□□□□ 0.35
CTSB-221ENST00000531502 ECHDC1Q9NTX5 307 aa17.23■□□□□ 0.35
CTSB-221ENST00000531502 TMEM39AQ9NV64 488 aa17.23■□□□□ 0.35
CTSB-221ENST00000531502 FAM184BQ9ULE4 1060 aa17.23■□□□□ 0.35
CTSB-221ENST00000531502 SPTBN5Q9NRC6 3674 aaKnown RBP17.23■□□□□ 0.35
CTSB-221ENST00000531502 MOXD2PA6NHM9 499 aa17.22■□□□□ 0.35
CTSB-221ENST00000531502 MINDY4BA8MYZ0 360 aa17.22■□□□□ 0.35
CTSB-221ENST00000531502 DUSP11O75319 330 aaKnown RBP17.22■□□□□ 0.35
CTSB-221ENST00000531502 CST5P28325 142 aaPredicted RBP17.22■□□□□ 0.35
CTSB-221ENST00000531502 FPGSQ05932 587 aa17.22■□□□□ 0.35
CTSB-221ENST00000531502 C20orf194Q5TEA3 1177 aa17.22■□□□□ 0.35
CTSB-221ENST00000531502 NUP133Q8WUM0 1156 aa17.22■□□□□ 0.35
CTSB-221ENST00000531502 APPBP2Q92624 585 aa17.22■□□□□ 0.35
CTSB-221ENST00000531502 DDX11Q96FC9 970 aa17.22■□□□□ 0.35
CTSB-221ENST00000531502 SLC38A10Q9HBR0 1119 aa17.22■□□□□ 0.35
CTSB-221ENST00000531502 CLIP2Q9UDT6 1046 aa17.22■□□□□ 0.35
CTSB-221ENST00000531502 TBX21Q9UL17 535 aa17.22■□□□□ 0.35
CTSB-221ENST00000531502 CDK7P50613 346 aa17.21■□□□□ 0.35
CTSB-221ENST00000531502 ACVR2BQ13705 512 aa17.21■□□□□ 0.35
CTSB-221ENST00000531502 CPXCR1Q8N123 301 aa17.21■□□□□ 0.35
CTSB-221ENST00000531502 CEP95Q96GE4 821 aa17.21■□□□□ 0.35
CTSB-221ENST00000531502 UPF3AQ9H1J1 476 aaKnown RBP17.21■□□□□ 0.35
CTSB-221ENST00000531502 RAVER2Q9HCJ3 691 aaKnown RBP17.21■□□□□ 0.35
CTSB-221ENST00000531502 MTMR4Q9NYA4 1195 aa17.21■□□□□ 0.35
CTSB-221ENST00000531502 ZHX1Q9UKY1 873 aaPredicted RBP17.21■□□□□ 0.35
CTSB-221ENST00000531502 DCDC2CA8MYV0 355 aa17.2■□□□□ 0.34
CTSB-221ENST00000531502 RNF113AO15541 343 aaKnown RBP17.2■□□□□ 0.34
CTSB-221ENST00000531502 GPAA1O43292 621 aa17.2■□□□□ 0.34
CTSB-221ENST00000531502 ZBED4O75132 1171 aa17.2■□□□□ 0.34
CTSB-221ENST00000531502 TIMP1P01033 207 aa17.2■□□□□ 0.34
CTSB-221ENST00000531502 KATNBL1Q9H079 304 aa17.2■□□□□ 0.34
CTSB-221ENST00000531502 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.2■□□□□ 0.34
CTSB-221ENST00000531502 SYNPO2Q9UMS6 1093 aa17.2■□□□□ 0.34
CTSB-221ENST00000531502 ELP1O95163 1332 aa17.2■□□□□ 0.34
CTSB-221ENST00000531502 M0R2C6 588 aa17.19■□□□□ 0.34
CTSB-221ENST00000531502 CTAGE5O15320 804 aa17.19■□□□□ 0.34
CTSB-221ENST00000531502 PRDM1O75626 825 aa17.19■□□□□ 0.34
CTSB-221ENST00000531502 FOSL2P15408 326 aa17.19■□□□□ 0.34
CTSB-221ENST00000531502 GJA9P57773 515 aa17.19■□□□□ 0.34
CTSB-221ENST00000531502 CCDC144BQ3MJ40 725 aa17.19■□□□□ 0.34
CTSB-221ENST00000531502 TSHZ3Q63HK5 1081 aa17.19■□□□□ 0.34
CTSB-221ENST00000531502 C16orf59Q7L2K0 433 aa17.19■□□□□ 0.34
CTSB-221ENST00000531502 CHST13Q8NET6 341 aa17.19■□□□□ 0.34
CTSB-221ENST00000531502 KIFC2Q96AC6 838 aa17.19■□□□□ 0.34
CTSB-221ENST00000531502 ABHD16BQ9H3Z7 469 aa17.19■□□□□ 0.34
CTSB-221ENST00000531502 FEM1BQ9UK73 627 aa17.19■□□□□ 0.34
CTSB-221ENST00000531502 RCAN3Q9UKA8 241 aa17.19■□□□□ 0.34
CTSB-221ENST00000531502 PLIN4Q96Q06 1357 aa17.18■□□□□ 0.34
CTSB-221ENST00000531502 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.18■□□□□ 0.34
CTSB-221ENST00000531502 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.18■□□□□ 0.34
CTSB-221ENST00000531502 ASGR1P07306 291 aa17.18■□□□□ 0.34
CTSB-221ENST00000531502 SLC4A3P48751 1232 aa17.18■□□□□ 0.34
CTSB-221ENST00000531502 OAZ1P54368 228 aa17.18■□□□□ 0.34
CTSB-221ENST00000531502 NKX3-2P78367 333 aa17.18■□□□□ 0.34
CTSB-221ENST00000531502 GRIN2CQ14957 1233 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms