RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 ATP2A1O14983 1001 aa26.44■■□□□ 1.82
TRAPPC4-210ENST00000531290 SLC38A10Q9HBR0 1119 aa26.44■■□□□ 1.82
TRAPPC4-210ENST00000531290 RAVER2Q9HCJ3 691 aaKnown RBP26.44■■□□□ 1.82
TRAPPC4-210ENST00000531290 RIPK3Q9Y572 518 aa26.44■■□□□ 1.82
TRAPPC4-210ENST00000531290 RLFQ13129 1914 aa26.43■■□□□ 1.82
TRAPPC4-210ENST00000531290 TSPY2A6NKD2 308 aa26.43■■□□□ 1.82
TRAPPC4-210ENST00000531290 RARBP10826 455 aa26.43■■□□□ 1.82
TRAPPC4-210ENST00000531290 CTDSPL2Q05D32 466 aa26.43■■□□□ 1.82
TRAPPC4-210ENST00000531290 RWDD1Q9H446 243 aaPredicted RBP26.43■■□□□ 1.82
TRAPPC4-210ENST00000531290 PRKAG2Q9UGJ0 569 aa26.43■■□□□ 1.82
TRAPPC4-210ENST00000531290 CNPY2Q9Y2B0 182 aa26.43■■□□□ 1.82
TRAPPC4-210ENST00000531290 PLIN4Q96Q06 1357 aa26.43■■□□□ 1.82
TRAPPC4-210ENST00000531290 ZNF236Q9UL36 1845 aa26.42■■□□□ 1.82
TRAPPC4-210ENST00000531290 LBHD1Q9BQE6 289 aaPredicted RBP26.42■■□□□ 1.82
TRAPPC4-210ENST00000531290 LNPKQ9C0E8 428 aa26.42■■□□□ 1.82
TRAPPC4-210ENST00000531290 STX8Q9UNK0 236 aa26.42■■□□□ 1.82
TRAPPC4-210ENST00000531290 MYH8P13535 1937 aa26.41■■□□□ 1.82
TRAPPC4-210ENST00000531290 TMEM232C9JQI7 657 aa26.41■■□□□ 1.82
TRAPPC4-210ENST00000531290 SOX1O00570 391 aaPredicted RBP26.41■■□□□ 1.82
TRAPPC4-210ENST00000531290 FOXP2O15409 715 aa26.41■■□□□ 1.82
TRAPPC4-210ENST00000531290 FDX1P10109 184 aa26.41■■□□□ 1.82
TRAPPC4-210ENST00000531290 OAZ1P54368 228 aa26.41■■□□□ 1.82
TRAPPC4-210ENST00000531290 RTP1P59025 263 aa26.41■■□□□ 1.82
TRAPPC4-210ENST00000531290 MDM2Q00987 491 aaPredicted RBP26.41■■□□□ 1.82
TRAPPC4-210ENST00000531290 IKQ13123 557 aaPredicted RBP26.41■■□□□ 1.82
TRAPPC4-210ENST00000531290 LRRC41Q15345 812 aa26.41■■□□□ 1.82
TRAPPC4-210ENST00000531290 VPS53Q5VIR6 699 aa26.41■■□□□ 1.82
TRAPPC4-210ENST00000531290 SLC39A5Q6ZMH5 540 aa26.41■■□□□ 1.82
TRAPPC4-210ENST00000531290 TICAM2Q86XR7 235 aa26.41■■□□□ 1.82
TRAPPC4-210ENST00000531290 TDHQ8IZJ6 230 aa26.41■■□□□ 1.82
TRAPPC4-210ENST00000531290 ANKRD35Q8N283 1001 aa26.41■■□□□ 1.82
TRAPPC4-210ENST00000531290 MSL3Q8N5Y2 521 aaKnown RBP26.41■■□□□ 1.82
TRAPPC4-210ENST00000531290 CHURC1Q8WUH1 139 aa26.41■■□□□ 1.82
TRAPPC4-210ENST00000531290 XPNPEP3Q9NQH7 507 aa26.41■■□□□ 1.82
TRAPPC4-210ENST00000531290 FBXO40Q9UH90 709 aa26.41■■□□□ 1.82
TRAPPC4-210ENST00000531290 ATP11BQ9Y2G3 1177 aa26.41■■□□□ 1.82
TRAPPC4-210ENST00000531290 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.41■■□□□ 1.82
TRAPPC4-210ENST00000531290 RANBP6O60518 1105 aaKnown RBP26.4■■□□□ 1.82
TRAPPC4-210ENST00000531290 TAL1P17542 331 aaPredicted RBP26.4■■□□□ 1.82
TRAPPC4-210ENST00000531290 ADCYAP1R1P41586 468 aa26.4■■□□□ 1.82
TRAPPC4-210ENST00000531290 SLC1A4P43007 532 aa26.4■■□□□ 1.82
TRAPPC4-210ENST00000531290 MCMDC2Q4G0Z9 681 aa26.4■■□□□ 1.82
TRAPPC4-210ENST00000531290 LRCH3Q96II8 777 aa26.4■■□□□ 1.82
TRAPPC4-210ENST00000531290 GMCL1Q96IK5 515 aa26.4■■□□□ 1.82
TRAPPC4-210ENST00000531290 INCENPQ9NQS7 918 aa26.4■■□□□ 1.82
TRAPPC4-210ENST00000531290 ANAPC4Q9UJX5 808 aa26.4■■□□□ 1.82
TRAPPC4-210ENST00000531290 TRIM6-TRIM34B2RNG4 842 aa26.39■■□□□ 1.82
TRAPPC4-210ENST00000531290 MCCP23508 829 aa26.39■■□□□ 1.82
TRAPPC4-210ENST00000531290 STAT2P52630 851 aa26.39■■□□□ 1.82
TRAPPC4-210ENST00000531290 ALX1Q15699 326 aa26.39■■□□□ 1.82
TRAPPC4-210ENST00000531290 B4GALNT3Q6L9W6 998 aa26.39■■□□□ 1.82
TRAPPC4-210ENST00000531290 RNF180Q86T96 592 aa26.39■■□□□ 1.82
TRAPPC4-210ENST00000531290 FAM160B2Q86V87 743 aa26.39■■□□□ 1.82
TRAPPC4-210ENST00000531290 CHST13Q8NET6 341 aa26.39■■□□□ 1.82
TRAPPC4-210ENST00000531290 STAG1Q8WVM7 1258 aa26.39■■□□□ 1.82
TRAPPC4-210ENST00000531290 FERMT2Q96AC1 680 aa26.39■■□□□ 1.82
TRAPPC4-210ENST00000531290 CHMP4CQ96CF2 233 aa26.39■■□□□ 1.82
TRAPPC4-210ENST00000531290 FAM227BQ96M60 508 aa26.39■■□□□ 1.82
TRAPPC4-210ENST00000531290 DNAJC25-GNG10A0A024R161 153 aa26.38■■□□□ 1.81
TRAPPC4-210ENST00000531290 ZNF865P0CJ78 1059 aaPredicted RBP26.38■■□□□ 1.81
TRAPPC4-210ENST00000531290 AKR1A1P14550 325 aa26.38■■□□□ 1.81
TRAPPC4-210ENST00000531290 LRIT3Q3SXY7 679 aa26.37■■□□□ 1.81
TRAPPC4-210ENST00000531290 ZNF467Q7Z7K2 595 aaPredicted RBP26.37■■□□□ 1.81
TRAPPC4-210ENST00000531290 RILPL2Q969X0 211 aa26.37■■□□□ 1.81
TRAPPC4-210ENST00000531290 IL17RBQ9NRM6 502 aa26.37■■□□□ 1.81
TRAPPC4-210ENST00000531290 TOMM22Q9NS69 142 aa26.37■■□□□ 1.81
TRAPPC4-210ENST00000531290 SZT2Q5T011 3432 aa26.37■■□□□ 1.81
TRAPPC4-210ENST00000531290 SYNGAP1Q96PV0 1343 aa26.37■■□□□ 1.81
TRAPPC4-210ENST00000531290 NMT2O60551 498 aa26.36■■□□□ 1.81
TRAPPC4-210ENST00000531290 PGK1P00558 417 aa26.36■■□□□ 1.81
TRAPPC4-210ENST00000531290 FGAP02671 866 aa26.36■■□□□ 1.81
TRAPPC4-210ENST00000531290 RCSD1Q6JBY9 416 aa26.36■■□□□ 1.81
TRAPPC4-210ENST00000531290 MAMDC4Q6UXC1 1216 aa26.36■■□□□ 1.81
TRAPPC4-210ENST00000531290 SMC5Q8IY18 1101 aa26.36■■□□□ 1.81
TRAPPC4-210ENST00000531290 HOMER2Q9NSB8 354 aa26.36■■□□□ 1.81
TRAPPC4-210ENST00000531290 FAM184BQ9ULE4 1060 aa26.36■■□□□ 1.81
TRAPPC4-210ENST00000531290 GREB1LQ9C091 1923 aaPredicted RBP26.35■■□□□ 1.81
TRAPPC4-210ENST00000531290 A0A0D9SFI3 127 aa26.35■■□□□ 1.81
TRAPPC4-210ENST00000531290 ORC4O43929 436 aa26.35■■□□□ 1.81
TRAPPC4-210ENST00000531290 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.35■■□□□ 1.81
TRAPPC4-210ENST00000531290 ZHX1Q9UKY1 873 aaPredicted RBP26.35■■□□□ 1.81
TRAPPC4-210ENST00000531290 ALPK3Q96L96 1907 aa26.35■■□□□ 1.81
TRAPPC4-210ENST00000531290 PLA2G6O60733 806 aa26.34■■□□□ 1.81
TRAPPC4-210ENST00000531290 SNAI1O95863 264 aaPredicted RBP26.34■■□□□ 1.81
TRAPPC4-210ENST00000531290 NMIQ13287 307 aaPredicted RBP26.34■■□□□ 1.81
TRAPPC4-210ENST00000531290 TRIM60Q495X7 471 aa26.34■■□□□ 1.81
TRAPPC4-210ENST00000531290 RRP12Q5JTH9 1297 aaKnown RBP26.34■■□□□ 1.81
TRAPPC4-210ENST00000531290 KCTD1Q719H9 257 aa26.34■■□□□ 1.81
TRAPPC4-210ENST00000531290 PRDM5Q9NQX1 630 aaPredicted RBP26.34■■□□□ 1.81
TRAPPC4-210ENST00000531290 PHF24Q9UPV7 400 aa26.34■■□□□ 1.81
TRAPPC4-210ENST00000531290 MTMR7Q9Y216 660 aa26.34■■□□□ 1.81
TRAPPC4-210ENST00000531290 FGRP09769 529 aa26.33■■□□□ 1.81
TRAPPC4-210ENST00000531290 HSPD1P10809 573 aaKnown RBP26.33■■□□□ 1.81
TRAPPC4-210ENST00000531290 SNX17Q15036 470 aa26.33■■□□□ 1.81
TRAPPC4-210ENST00000531290 CHD1LQ86WJ1 897 aa26.33■■□□□ 1.81
TRAPPC4-210ENST00000531290 ACAD9Q9H845 621 aa26.33■■□□□ 1.81
TRAPPC4-210ENST00000531290 TACC3Q9Y6A5 838 aa26.33■■□□□ 1.81
TRAPPC4-210ENST00000531290 MFAP1P55081 439 aaKnown RBP26.32■■□□□ 1.8
TRAPPC4-210ENST00000531290 ACVR2BQ13705 512 aa26.32■■□□□ 1.8
TRAPPC4-210ENST00000531290 TKFCQ3LXA3 575 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms