RNA–Protein interactions for RNA: ENST00000531089.5

CTSB-220, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-220ENST00000531089 SLC3A2P08195 630 aaKnown RBP18.41■□□□□ 0.54
CTSB-220ENST00000531089 SDSP20132 328 aa18.41■□□□□ 0.54
CTSB-220ENST00000531089 PDE4AP27815 886 aa18.41■□□□□ 0.54
CTSB-220ENST00000531089 MAGEA10P43363 369 aaPredicted RBP18.41■□□□□ 0.54
CTSB-220ENST00000531089 PPARAQ07869 468 aa18.41■□□□□ 0.54
CTSB-220ENST00000531089 FAM47AQ5JRC9 791 aa18.41■□□□□ 0.54
CTSB-220ENST00000531089 GJC2Q5T442 439 aaPredicted RBP18.41■□□□□ 0.54
CTSB-220ENST00000531089 INCENPQ9NQS7 918 aa18.41■□□□□ 0.54
CTSB-220ENST00000531089 HIP1O00291 1037 aa18.4■□□□□ 0.54
CTSB-220ENST00000531089 DNM1LO00429 736 aa18.4■□□□□ 0.54
CTSB-220ENST00000531089 TTLL1O95922 423 aa18.4■□□□□ 0.54
CTSB-220ENST00000531089 TFAP4Q01664 338 aa18.4■□□□□ 0.54
CTSB-220ENST00000531089 PDE4BQ07343 736 aa18.4■□□□□ 0.54
CTSB-220ENST00000531089 NMIQ13287 307 aaPredicted RBP18.4■□□□□ 0.54
CTSB-220ENST00000531089 ARRDC4Q8NCT1 418 aa18.4■□□□□ 0.54
CTSB-220ENST00000531089 TINF2Q9BSI4 451 aa18.4■□□□□ 0.54
CTSB-220ENST00000531089 TACC3Q9Y6A5 838 aa18.4■□□□□ 0.54
CTSB-220ENST00000531089 A0A0D9SFI3 127 aa18.4■□□□□ 0.54
CTSB-220ENST00000531089 ATP2A1O14983 1001 aa18.4■□□□□ 0.54
CTSB-220ENST00000531089 MFAP1P55081 439 aaKnown RBP18.4■□□□□ 0.54
CTSB-220ENST00000531089 KCTD2Q14681 263 aa18.4■□□□□ 0.54
CTSB-220ENST00000531089 SYNPO2Q9UMS6 1093 aa18.4■□□□□ 0.54
CTSB-220ENST00000531089 TSPY3P0CV98 308 aa18.39■□□□□ 0.53
CTSB-220ENST00000531089 TSPY8P0CW00 308 aa18.39■□□□□ 0.53
CTSB-220ENST00000531089 TAL1P17542 331 aaPredicted RBP18.39■□□□□ 0.53
CTSB-220ENST00000531089 COPB2P35606 906 aa18.39■□□□□ 0.53
CTSB-220ENST00000531089 ATN1P54259 1190 aaPredicted RBP18.39■□□□□ 0.53
CTSB-220ENST00000531089 VPS53Q5VIR6 699 aa18.39■□□□□ 0.53
CTSB-220ENST00000531089 GMCL1P1Q8NEA9 526 aa18.39■□□□□ 0.53
CTSB-220ENST00000531089 LRCH3Q96II8 777 aa18.39■□□□□ 0.53
CTSB-220ENST00000531089 TEX13BQ9BXU2 312 aa18.39■□□□□ 0.53
CTSB-220ENST00000531089 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.39■□□□□ 0.536e-6■■□□□ 13.9
CTSB-220ENST00000531089 COL6A3P12111 3177 aa18.38■□□□□ 0.53
CTSB-220ENST00000531089 CTDSPL2Q05D32 466 aa18.38■□□□□ 0.53
CTSB-220ENST00000531089 ALX1Q15699 326 aa18.38■□□□□ 0.53
CTSB-220ENST00000531089 SLFN13Q68D06 897 aa18.38■□□□□ 0.53
CTSB-220ENST00000531089 SNRNP48Q6IEG0 339 aaKnown RBP18.38■□□□□ 0.53
CTSB-220ENST00000531089 SLC39A5Q6ZMH5 540 aa18.38■□□□□ 0.53
CTSB-220ENST00000531089 CPXCR1Q8N123 301 aa18.38■□□□□ 0.53
CTSB-220ENST00000531089 LRRC47Q8N1G4 583 aaKnown RBP18.38■□□□□ 0.53
CTSB-220ENST00000531089 SLC38A10Q9HBR0 1119 aa18.38■□□□□ 0.53
CTSB-220ENST00000531089 IL17RBQ9NRM6 502 aa18.38■□□□□ 0.53
CTSB-220ENST00000531089 DIAPH3Q9NSV4 1193 aa18.38■□□□□ 0.53
CTSB-220ENST00000531089 NRBP1Q9UHY1 535 aa18.38■□□□□ 0.53
CTSB-220ENST00000531089 FEM1BQ9UK73 627 aa18.38■□□□□ 0.53
CTSB-220ENST00000531089 DNAJC25-GNG10A0A024R161 153 aa18.37■□□□□ 0.53
CTSB-220ENST00000531089 ZBED4O75132 1171 aa18.37■□□□□ 0.53
CTSB-220ENST00000531089 ZNF865P0CJ78 1059 aaPredicted RBP18.37■□□□□ 0.53
CTSB-220ENST00000531089 HSPD1P10809 573 aaKnown RBP18.37■□□□□ 0.53
CTSB-220ENST00000531089 LRRC41Q15345 812 aa18.37■□□□□ 0.53
CTSB-220ENST00000531089 TTC22Q5TAA0 569 aa18.37■□□□□ 0.53
CTSB-220ENST00000531089 CWC27Q6UX04 472 aaKnown RBP18.37■□□□□ 0.53
CTSB-220ENST00000531089 KIFC2Q96AC6 838 aa18.37■□□□□ 0.53
CTSB-220ENST00000531089 RAVER2Q9HCJ3 691 aaKnown RBP18.37■□□□□ 0.53
CTSB-220ENST00000531089 PLIN4Q96Q06 1357 aa18.37■□□□□ 0.53
CTSB-220ENST00000531089 CCDC171Q6TFL3 1326 aa18.36■□□□□ 0.53
CTSB-220ENST00000531089 FGAP02671 866 aa18.36■□□□□ 0.53
CTSB-220ENST00000531089 FGRP09769 529 aa18.36■□□□□ 0.53
CTSB-220ENST00000531089 BMP3P12645 472 aa18.36■□□□□ 0.53
CTSB-220ENST00000531089 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.36■□□□□ 0.53
CTSB-220ENST00000531089 ANAPC4Q9UJX5 808 aa18.36■□□□□ 0.53
CTSB-220ENST00000531089 SNAI1O95863 264 aaPredicted RBP18.35■□□□□ 0.53
CTSB-220ENST00000531089 ADCYAP1R1P41586 468 aa18.35■□□□□ 0.53
CTSB-220ENST00000531089 SLC4A3P48751 1232 aa18.35■□□□□ 0.53
CTSB-220ENST00000531089 MDM2Q00987 491 aaPredicted RBP18.35■□□□□ 0.53
CTSB-220ENST00000531089 LRIT3Q3SXY7 679 aa18.35■□□□□ 0.53
CTSB-220ENST00000531089 MAMDC4Q6UXC1 1216 aa18.35■□□□□ 0.53
CTSB-220ENST00000531089 ZNF589Q86UQ0 364 aaPredicted RBP18.35■□□□□ 0.53
CTSB-220ENST00000531089 TDHQ8IZJ6 230 aa18.35■□□□□ 0.53
CTSB-220ENST00000531089 DDX11Q96FC9 970 aa18.35■□□□□ 0.53
CTSB-220ENST00000531089 UBE2OQ9C0C9 1292 aaKnown RBP18.35■□□□□ 0.53
CTSB-220ENST00000531089 MCM3APO60318 1980 aa18.35■□□□□ 0.53
CTSB-220ENST00000531089 TMEM232C9JQI7 657 aa18.34■□□□□ 0.53
CTSB-220ENST00000531089 NMT2O60551 498 aa18.34■□□□□ 0.53
CTSB-220ENST00000531089 MCCP23508 829 aa18.34■□□□□ 0.53
CTSB-220ENST00000531089 NOVP48745 357 aa18.34■□□□□ 0.53
CTSB-220ENST00000531089 RTP1P59025 263 aa18.34■□□□□ 0.53
CTSB-220ENST00000531089 CENPQQ7L2Z9 268 aaPredicted RBP18.34■□□□□ 0.53
CTSB-220ENST00000531089 MSL3Q8N5Y2 521 aaKnown RBP18.34■□□□□ 0.53
CTSB-220ENST00000531089 KBTBD13C9JR72 458 aa18.33■□□□□ 0.53
CTSB-220ENST00000531089 FDX1P10109 184 aa18.33■□□□□ 0.53
CTSB-220ENST00000531089 GSPT1P15170 499 aaKnown RBP18.33■□□□□ 0.53
CTSB-220ENST00000531089 OAZ1P54368 228 aa18.33■□□□□ 0.53
CTSB-220ENST00000531089 SNX17Q15036 470 aa18.33■□□□□ 0.53
CTSB-220ENST00000531089 CHURC1Q8WUH1 139 aa18.33■□□□□ 0.53
CTSB-220ENST00000531089 STAG1Q8WVM7 1258 aa18.33■□□□□ 0.53
CTSB-220ENST00000531089 FERMT2Q96AC1 680 aa18.33■□□□□ 0.53
CTSB-220ENST00000531089 GMCL1Q96IK5 515 aa18.33■□□□□ 0.53
CTSB-220ENST00000531089 TSPY2A6NKD2 308 aa18.32■□□□□ 0.52
CTSB-220ENST00000531089 PLA2G6O60733 806 aa18.32■□□□□ 0.52
CTSB-220ENST00000531089 PGK1P00558 417 aa18.32■□□□□ 0.52
CTSB-220ENST00000531089 MYCNP04198 464 aaPredicted RBP18.32■□□□□ 0.52
CTSB-220ENST00000531089 RARBP10826 455 aa18.32■□□□□ 0.52
CTSB-220ENST00000531089 RCSD1Q6JBY9 416 aa18.32■□□□□ 0.52
CTSB-220ENST00000531089 CHST13Q8NET6 341 aa18.32■□□□□ 0.52
CTSB-220ENST00000531089 CHMP4CQ96CF2 233 aa18.32■□□□□ 0.52
CTSB-220ENST00000531089 FGD4Q96M96 766 aa18.32■□□□□ 0.52
CTSB-220ENST00000531089 XPNPEP3Q9NQH7 507 aa18.32■□□□□ 0.52
CTSB-220ENST00000531089 CTDP1Q9Y5B0 961 aaPredicted RBP18.32■□□□□ 0.52
CTSB-220ENST00000531089 ZNF536O15090 1300 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms