RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 NPLOC4Q8TAT6 608 aa22.05■■□□□ 1.12
GMDS-208ENST00000530927 RAVER2Q9HCJ3 691 aaKnown RBP22.05■■□□□ 1.12
GMDS-208ENST00000530927 FLRT1Q9NZU1 646 aa22.05■■□□□ 1.12
GMDS-208ENST00000530927 SLC16A2P36021 539 aa22.04■■□□□ 1.12
GMDS-208ENST00000530927 STAT3P40763 770 aa22.04■■□□□ 1.12
GMDS-208ENST00000530927 IKQ13123 557 aaPredicted RBP22.04■■□□□ 1.12
GMDS-208ENST00000530927 PPP4R3BQ5MIZ7 849 aa22.04■■□□□ 1.12
GMDS-208ENST00000530927 ENAHQ8N8S7 591 aaPredicted RBP22.04■■□□□ 1.12
GMDS-208ENST00000530927 IVNS1ABPQ9Y6Y0 642 aa22.04■■□□□ 1.12
GMDS-208ENST00000530927 TNKSO95271 1327 aa22.03■■□□□ 1.12
GMDS-208ENST00000530927 SLC15A5A6NIM6 579 aa22.03■■□□□ 1.12
GMDS-208ENST00000530927 E7EWF7 191 aa22.03■■□□□ 1.12
GMDS-208ENST00000530927 PDHBP11177 359 aa22.03■■□□□ 1.12
GMDS-208ENST00000530927 ADORA2AP29274 412 aa22.03■■□□□ 1.12
GMDS-208ENST00000530927 RGS2P41220 211 aa22.03■■□□□ 1.12
GMDS-208ENST00000530927 STAT2P52630 851 aa22.03■■□□□ 1.12
GMDS-208ENST00000530927 SNRNP48Q6IEG0 339 aaKnown RBP22.03■■□□□ 1.12
GMDS-208ENST00000530927 CHST3Q7LGC8 479 aa22.03■■□□□ 1.12
GMDS-208ENST00000530927 RIOX2Q8IUF8 465 aa22.03■■□□□ 1.12
GMDS-208ENST00000530927 SHCBP1Q8NEM2 672 aa22.03■■□□□ 1.12
GMDS-208ENST00000530927 ZSCAN10Q96SZ4 725 aaPredicted RBP22.03■■□□□ 1.12
GMDS-208ENST00000530927 APBA2Q99767 749 aa22.03■■□□□ 1.12
GMDS-208ENST00000530927 TMEM106CQ9BVX2 250 aa22.03■■□□□ 1.12
GMDS-208ENST00000530927 KRT23Q9C075 422 aa22.03■■□□□ 1.12
GMDS-208ENST00000530927 RNF208Q9H0X6 261 aa22.03■■□□□ 1.12
GMDS-208ENST00000530927 SLC38A10Q9HBR0 1119 aa22.03■■□□□ 1.12
GMDS-208ENST00000530927 GPCPD1Q9NPB8 672 aa22.03■■□□□ 1.12
GMDS-208ENST00000530927 ANO2Q9NQ90 1003 aa22.03■■□□□ 1.12
GMDS-208ENST00000530927 KIAA0100Q14667 2235 aaKnown RBP22.02■■□□□ 1.12
GMDS-208ENST00000530927 COBLO75128 1261 aa22.02■■□□□ 1.12
GMDS-208ENST00000530927 CDC45O75419 566 aa22.02■■□□□ 1.12
GMDS-208ENST00000530927 HMGCRP04035 888 aa22.02■■□□□ 1.12
GMDS-208ENST00000530927 UBXN2AP68543 259 aa22.02■■□□□ 1.12
GMDS-208ENST00000530927 KIAA1211Q6ZU35 1233 aa22.02■■□□□ 1.12
GMDS-208ENST00000530927 GOLGA8HP0CJ92 632 aa22.01■■□□□ 1.11
GMDS-208ENST00000530927 XRCC5P13010 732 aaKnown RBP22.01■■□□□ 1.11
GMDS-208ENST00000530927 IQCA1Q86XH1 822 aa22.01■■□□□ 1.11
GMDS-208ENST00000530927 DCAF4Q8WV16 495 aa22.01■■□□□ 1.11
GMDS-208ENST00000530927 SHISA4Q96DD7 197 aa22.01■■□□□ 1.11
GMDS-208ENST00000530927 TTC14Q96N46 770 aa22.01■■□□□ 1.11
GMDS-208ENST00000530927 CPVLQ9H3G5 476 aa22.01■■□□□ 1.11
GMDS-208ENST00000530927 MROH8Q9H579 483 aa22.01■■□□□ 1.11
GMDS-208ENST00000530927 CNNM2Q9H8M5 875 aa22.01■■□□□ 1.11
GMDS-208ENST00000530927 SENP2Q9HC62 589 aa22.01■■□□□ 1.11
GMDS-208ENST00000530927 PRR12Q9ULL5 1215 aa22.01■■□□□ 1.11
GMDS-208ENST00000530927 ZNF236Q9UL36 1845 aa22.01■■□□□ 1.11
GMDS-208ENST00000530927 ZNF536O15090 1300 aa22.01■■□□□ 1.11
GMDS-208ENST00000530927 ZBED4O75132 1171 aa22■■□□□ 1.11
GMDS-208ENST00000530927 PGK2P07205 417 aa22■■□□□ 1.11
GMDS-208ENST00000530927 ZKSCAN1P17029 563 aaPredicted RBP22■■□□□ 1.11
GMDS-208ENST00000530927 CCDC174Q6PII3 467 aa22■■□□□ 1.11
GMDS-208ENST00000530927 DGKHQ86XP1 1220 aa22■■□□□ 1.11
GMDS-208ENST00000530927 TEX13BQ9BXU2 312 aa22■■□□□ 1.11
GMDS-208ENST00000530927 SLC27A2O14975 620 aa21.99■■□□□ 1.11
GMDS-208ENST00000530927 SLC25A27O95847 323 aa21.99■■□□□ 1.11
GMDS-208ENST00000530927 MLLT1Q03111 559 aaPredicted RBP21.99■■□□□ 1.11
GMDS-208ENST00000530927 FAM160B2Q86V87 743 aa21.99■■□□□ 1.11
GMDS-208ENST00000530927 PNMA1Q8ND90 353 aa21.99■■□□□ 1.11
GMDS-208ENST00000530927 CHURC1Q8WUH1 139 aa21.99■■□□□ 1.11
GMDS-208ENST00000530927 AGBL1Q96MI9 1066 aa21.99■■□□□ 1.11
GMDS-208ENST00000530927 HOMER2Q9NSB8 354 aa21.99■■□□□ 1.11
GMDS-208ENST00000530927 CTDP1Q9Y5B0 961 aaPredicted RBP21.99■■□□□ 1.11
GMDS-208ENST00000530927 SNHG28P0DPA3 235 aa21.98■■□□□ 1.11
GMDS-208ENST00000530927 PRKAR2AP13861 404 aaKnown RBP21.98■■□□□ 1.11
GMDS-208ENST00000530927 ANTXR2P58335 489 aa21.98■■□□□ 1.11
GMDS-208ENST00000530927 CACNB2Q08289 660 aaPredicted RBP21.98■■□□□ 1.11
GMDS-208ENST00000530927 ZNF543Q08ER8 600 aa21.98■■□□□ 1.11
GMDS-208ENST00000530927 SEC23AQ15436 765 aa21.98■■□□□ 1.11
GMDS-208ENST00000530927 DPP9Q86TI2 863 aa21.98■■□□□ 1.11
GMDS-208ENST00000530927 DEFB118Q96PH6 123 aa21.98■■□□□ 1.11
GMDS-208ENST00000530927 MMP19Q99542 508 aa21.98■■□□□ 1.11
GMDS-208ENST00000530927 UBAC1Q9BSL1 405 aa21.98■■□□□ 1.11
GMDS-208ENST00000530927 KAT14Q9H8E8 782 aa21.98■■□□□ 1.11
GMDS-208ENST00000530927 ZNFX1Q9P2E3 1918 aaKnown RBP21.98■■□□□ 1.11
GMDS-208ENST00000530927 FCER1AP12319 257 aa21.97■■□□□ 1.11
GMDS-208ENST00000530927 CCND3P30281 292 aaPredicted RBP21.97■■□□□ 1.11
GMDS-208ENST00000530927 CYP2C19P33261 490 aa21.97■■□□□ 1.11
GMDS-208ENST00000530927 TRDNQ13061 729 aa21.97■■□□□ 1.11
GMDS-208ENST00000530927 NECTIN1Q15223 517 aa21.97■■□□□ 1.11
GMDS-208ENST00000530927 MAP3K21Q5TCX8 1036 aa21.97■■□□□ 1.11
GMDS-208ENST00000530927 CREB3L3Q68CJ9 461 aa21.97■■□□□ 1.11
GMDS-208ENST00000530927 ANKS1AQ92625 1134 aa21.97■■□□□ 1.11
GMDS-208ENST00000530927 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.97■■□□□ 1.11
GMDS-208ENST00000530927 GPHNQ9NQX3 736 aaPredicted RBP21.97■■□□□ 1.11
GMDS-208ENST00000530927 ATP2A1O14983 1001 aa21.97■■□□□ 1.11
GMDS-208ENST00000530927 STRNO43815 780 aa21.97■■□□□ 1.11
GMDS-208ENST00000530927 PLA2G6O60733 806 aa21.97■■□□□ 1.11
GMDS-208ENST00000530927 HOXC6P09630 235 aa21.97■■□□□ 1.11
GMDS-208ENST00000530927 SYDE2Q5VT97 1194 aa21.97■■□□□ 1.11
GMDS-208ENST00000530927 MB21D2Q8IYB1 491 aaPredicted RBP21.97■■□□□ 1.11
GMDS-208ENST00000530927 PAK6Q9NQU5 681 aaPredicted RBP21.97■■□□□ 1.11
GMDS-208ENST00000530927 SMCHD1A6NHR9 2005 aa21.96■■□□□ 1.11
GMDS-208ENST00000530927 GJB1P08034 283 aa21.96■■□□□ 1.11
GMDS-208ENST00000530927 IFIT1BQ5T764 474 aaKnown RBP21.96■■□□□ 1.11
GMDS-208ENST00000530927 BTNL9Q6UXG8 535 aa21.96■■□□□ 1.11
GMDS-208ENST00000530927 RALYLQ86SE5 291 aaKnown RBP21.96■■□□□ 1.11
GMDS-208ENST00000530927 NCOA7Q8NI08 942 aa21.96■■□□□ 1.11
GMDS-208ENST00000530927 U2AF1L4Q8WU68 220 aaKnown RBP21.96■■□□□ 1.11
GMDS-208ENST00000530927 UBA5Q9GZZ9 404 aa21.96■■□□□ 1.11
GMDS-208ENST00000530927 GJA8P48165 433 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms