RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 JAKMIP2Q96AA8 810 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 PA2G4Q9UQ80 394 aaKnown RBP9.07□□□□□ -0.96
CSDE1-214ENST00000530886 LEMD3Q9Y2U8 911 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 REXO2Q9Y3B8 237 aaKnown RBP9.07□□□□□ -0.96
CSDE1-214ENST00000530886 ZNF233A6NK53 670 aa9.06□□□□□ -0.96
CSDE1-214ENST00000530886 OPLAHO14841 1288 aa9.06□□□□□ -0.96
CSDE1-214ENST00000530886 IFIT3O14879 490 aaKnown RBP9.06□□□□□ -0.96
CSDE1-214ENST00000530886 NPM1P06748 294 aaKnown RBP eCLIP9.06□□□□□ -0.96
CSDE1-214ENST00000530886 HDGFP51858 240 aaKnown RBP9.06□□□□□ -0.96
CSDE1-214ENST00000530886 LBRQ14739 615 aaKnown RBP9.06□□□□□ -0.96
CSDE1-214ENST00000530886 CCDC96Q2M329 555 aa9.06□□□□□ -0.96
CSDE1-214ENST00000530886 SEC16BQ96JE7 1060 aa9.06□□□□□ -0.96
CSDE1-214ENST00000530886 GDAP1L1Q96MZ0 367 aa9.06□□□□□ -0.96
CSDE1-214ENST00000530886 EYA1Q99502 592 aa9.06□□□□□ -0.96
CSDE1-214ENST00000530886 TSC22D3Q99576 134 aa9.06□□□□□ -0.96
CSDE1-214ENST00000530886 SLX1AQ9BQ83 275 aa9.06□□□□□ -0.96
CSDE1-214ENST00000530886 HPS5Q9UPZ3 1129 aa9.06□□□□□ -0.96
CSDE1-214ENST00000530886 DIP2BQ9P265 1576 aa9.06□□□□□ -0.96
CSDE1-214ENST00000530886 AKAP11Q9UKA4 1901 aa9.06□□□□□ -0.96
CSDE1-214ENST00000530886 STXBP3O00186 592 aa9.06□□□□□ -0.96
CSDE1-214ENST00000530886 PYGBP11216 843 aa9.06□□□□□ -0.96
CSDE1-214ENST00000530886 CCND1P24385 295 aa9.06□□□□□ -0.96
CSDE1-214ENST00000530886 CASP14P31944 242 aa9.06□□□□□ -0.96
CSDE1-214ENST00000530886 ABCD1P33897 745 aa9.06□□□□□ -0.96
CSDE1-214ENST00000530886 WASHC4Q2M389 1173 aa9.06□□□□□ -0.96
CSDE1-214ENST00000530886 LRIG3Q6UXM1 1119 aa9.06□□□□□ -0.96
CSDE1-214ENST00000530886 NUP133Q8WUM0 1156 aa9.06□□□□□ -0.96
CSDE1-214ENST00000530886 HVCN1Q96D96 273 aa9.06□□□□□ -0.96
CSDE1-214ENST00000530886 RBM41Q96IZ5 413 aaKnown RBP9.06□□□□□ -0.96
CSDE1-214ENST00000530886 CCDC61Q9Y6R9 512 aa9.06□□□□□ -0.96
CSDE1-214ENST00000530886 FLT4P35916 1363 aa9.06□□□□□ -0.96
CSDE1-214ENST00000530886 TEX33O43247 280 aa9.06□□□□□ -0.96
CSDE1-214ENST00000530886 ATP1A2P50993 1020 aa9.06□□□□□ -0.96
CSDE1-214ENST00000530886 SEC24CP53992 1094 aa9.06□□□□□ -0.96
CSDE1-214ENST00000530886 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.06□□□□□ -0.961e-7■■■■□ 24.2
CSDE1-214ENST00000530886 PIK3R5Q8WYR1 880 aa9.06□□□□□ -0.96
CSDE1-214ENST00000530886 YIPF3Q9GZM5 350 aa9.06□□□□□ -0.96
CSDE1-214ENST00000530886 SLC12A6Q9UHW9 1150 aa9.06□□□□□ -0.96
CSDE1-214ENST00000530886 PXDNQ92626 1479 aa9.05□□□□□ -0.96
CSDE1-214ENST00000530886 LRRC10BA6NIK2 292 aa9.05□□□□□ -0.96
CSDE1-214ENST00000530886 E7EVH7 732 aa9.05□□□□□ -0.96
CSDE1-214ENST00000530886 PDE2AO00408 941 aaPredicted RBP9.05□□□□□ -0.96
CSDE1-214ENST00000530886 NDUFA10O95299 355 aa9.05□□□□□ -0.96
CSDE1-214ENST00000530886 HOXB7P09629 217 aa9.05□□□□□ -0.96
CSDE1-214ENST00000530886 FXR1P51114 621 aaKnown RBP eCLIP9.05□□□□□ -0.961e-6■■■□□ 18.2
CSDE1-214ENST00000530886 SEPT2Q15019 361 aa9.05□□□□□ -0.96
CSDE1-214ENST00000530886 SPATA1Q5VX52 437 aa9.05□□□□□ -0.96
CSDE1-214ENST00000530886 CACNA2D3Q8IZS8 1091 aa9.05□□□□□ -0.96
CSDE1-214ENST00000530886 TSGA10Q9BZW7 698 aa9.05□□□□□ -0.96
CSDE1-214ENST00000530886 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.05□□□□□ -0.967e-7■□□□□ 9.9
CSDE1-214ENST00000530886 SH2B2O14492 632 aaPredicted RBP9.05□□□□□ -0.96
CSDE1-214ENST00000530886 ZMYND10O75800 440 aa9.05□□□□□ -0.96
CSDE1-214ENST00000530886 DPY19L2Q6NUT2 758 aa9.05□□□□□ -0.96
CSDE1-214ENST00000530886 SH2D3CQ8N5H7 860 aa9.05□□□□□ -0.96
CSDE1-214ENST00000530886 EIF1ADQ8N9N8 165 aaKnown RBP9.05□□□□□ -0.96
CSDE1-214ENST00000530886 SMCR8Q8TEV9 937 aaPredicted RBP9.05□□□□□ -0.96
CSDE1-214ENST00000530886 SEC31BQ9NQW1 1179 aa9.05□□□□□ -0.96
CSDE1-214ENST00000530886 SAMSN1Q9NSI8 373 aaKnown RBP9.05□□□□□ -0.96
CSDE1-214ENST00000530886 STIM2Q9P246 746 aa9.05□□□□□ -0.96
CSDE1-214ENST00000530886 HDAC6Q9UBN7 1215 aa9.05□□□□□ -0.96
CSDE1-214ENST00000530886 BCORQ6W2J9 1755 aa9.05□□□□□ -0.96
CSDE1-214ENST00000530886 SCN11AQ9UI33 1791 aa9.05□□□□□ -0.96
CSDE1-214ENST00000530886 ABCC12Q96J65 1359 aa9.05□□□□□ -0.96
CSDE1-214ENST00000530886 PLEKHG3A1L390 1219 aa9.04□□□□□ -0.96
CSDE1-214ENST00000530886 RASSF10A6NK89 507 aa9.04□□□□□ -0.96
CSDE1-214ENST00000530886 BCL9O00512 1426 aa9.04□□□□□ -0.96
CSDE1-214ENST00000530886 SSBP05455 408 aaKnown RBP eCLIP9.04□□□□□ -0.96
CSDE1-214ENST00000530886 GNAT1P11488 350 aa9.04□□□□□ -0.96
CSDE1-214ENST00000530886 EIF4A1P60842 406 aaKnown RBP9.04□□□□□ -0.96
CSDE1-214ENST00000530886 KIF23Q02241 960 aaPredicted RBP9.04□□□□□ -0.96
CSDE1-214ENST00000530886 SFSWAPQ12872 951 aaKnown RBP9.04□□□□□ -0.96
CSDE1-214ENST00000530886 LONRF3Q496Y0 759 aa9.04□□□□□ -0.96
CSDE1-214ENST00000530886 ZMYM1Q5SVZ6 1142 aa9.04□□□□□ -0.96
CSDE1-214ENST00000530886 CREG2Q8IUH2 290 aa9.04□□□□□ -0.96
CSDE1-214ENST00000530886 TBC1D31Q96DN5 1066 aa9.04□□□□□ -0.96
CSDE1-214ENST00000530886 GDF3Q9NR23 364 aa9.04□□□□□ -0.96
CSDE1-214ENST00000530886 EPN1Q9Y6I3 576 aaPredicted RBP9.04□□□□□ -0.96
CSDE1-214ENST00000530886 MYH6P13533 1939 aa9.04□□□□□ -0.96
CSDE1-214ENST00000530886 ABL2P42684 1182 aa9.04□□□□□ -0.96
CSDE1-214ENST00000530886 DYNC1I2Q13409 638 aaKnown RBP9.04□□□□□ -0.96
CSDE1-214ENST00000530886 EDC3Q96F86 508 aaKnown RBP9.04□□□□□ -0.96
CSDE1-214ENST00000530886 TMBIM4Q9HC24 238 aa9.04□□□□□ -0.96
CSDE1-214ENST00000530886 NCOA5Q9HCD5 579 aaKnown RBP9.04□□□□□ -0.96
CSDE1-214ENST00000530886 WDR35Q9P2L0 1181 aa9.04□□□□□ -0.96
CSDE1-214ENST00000530886 ALDH1B1P30837 517 aa9.04□□□□□ -0.96
CSDE1-214ENST00000530886 ITIH4Q14624 930 aa9.04□□□□□ -0.96
CSDE1-214ENST00000530886 IFI16Q16666 785 aaKnown RBP9.04□□□□□ -0.96
CSDE1-214ENST00000530886 CFAP58Q5T655 872 aa9.04□□□□□ -0.96
CSDE1-214ENST00000530886 SLC9C2Q5TAH2 1124 aa9.04□□□□□ -0.96
CSDE1-214ENST00000530886 MAATS1Q7Z4T9 603 aa9.04□□□□□ -0.96
CSDE1-214ENST00000530886 C8orf76Q96K31 380 aa9.04□□□□□ -0.96
CSDE1-214ENST00000530886 PI4KAP2A4QPH2 592 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 CCT8L1PA6NM43 557 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 RNF225M0QZC1 329 aaPredicted RBP9.03□□□□□ -0.96
CSDE1-214ENST00000530886 WFS1O76024 890 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 IBSPP21815 317 aaPredicted RBP9.03□□□□□ -0.96
CSDE1-214ENST00000530886 ALDH3A1P30838 453 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 RFX5P48382 616 aaPredicted RBP9.03□□□□□ -0.96
CSDE1-214ENST00000530886 CUL3Q13618 768 aa9.03□□□□□ -0.96
CSDE1-214ENST00000530886 POSTNQ15063 836 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms