RNA–Protein interactions for RNA: ENST00000530695.1

PKP3-207, Transcript of plakophilin 3, humanhuman

TSL 5

Gene PKP3, Length 441 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-207ENST00000530695 CTDP1Q9Y5B0 961 aaPredicted RBP20.23■□□□□ 0.83
PKP3-207ENST00000530695 ZBED4O75132 1171 aa20.22■□□□□ 0.83
PKP3-207ENST00000530695 TFAP4Q01664 338 aa20.22■□□□□ 0.83
PKP3-207ENST00000530695 FAM47AQ5JRC9 791 aa20.22■□□□□ 0.83
PKP3-207ENST00000530695 TDHQ8IZJ6 230 aa20.22■□□□□ 0.83
PKP3-207ENST00000530695 GMCL1P1Q8NEA9 526 aa20.22■□□□□ 0.83
PKP3-207ENST00000530695 KIFC2Q96AC6 838 aa20.22■□□□□ 0.83
PKP3-207ENST00000530695 FEM1BQ9UK73 627 aa20.22■□□□□ 0.83
PKP3-207ENST00000530695 LTBP2Q14767 1821 aa20.22■□□□□ 0.83
PKP3-207ENST00000530695 SLC4A3P48751 1232 aa20.21■□□□□ 0.83
PKP3-207ENST00000530695 MDM2Q00987 491 aaPredicted RBP20.21■□□□□ 0.83
PKP3-207ENST00000530695 HDAC1Q13547 482 aaPredicted RBP20.21■□□□□ 0.83
PKP3-207ENST00000530695 CPXCR1Q8N123 301 aa20.21■□□□□ 0.83
PKP3-207ENST00000530695 EVI5LQ96CN4 794 aa20.21■□□□□ 0.83
PKP3-207ENST00000530695 RIPK3Q9Y572 518 aa20.21■□□□□ 0.83
PKP3-207ENST00000530695 ATP2A1O14983 1001 aa20.2■□□□□ 0.82
PKP3-207ENST00000530695 PDE1AP54750 535 aa20.2■□□□□ 0.82
PKP3-207ENST00000530695 RTP1P59025 263 aa20.2■□□□□ 0.82
PKP3-207ENST00000530695 LRRC41Q15345 812 aa20.2■□□□□ 0.82
PKP3-207ENST00000530695 SLFN13Q68D06 897 aa20.2■□□□□ 0.82
PKP3-207ENST00000530695 SLC38A10Q9HBR0 1119 aa20.2■□□□□ 0.82
PKP3-207ENST00000530695 COL6A3P12111 3177 aa20.2■□□□□ 0.82
PKP3-207ENST00000530695 FOXP2O15409 715 aa20.19■□□□□ 0.82
PKP3-207ENST00000530695 RARBP10826 455 aa20.19■□□□□ 0.82
PKP3-207ENST00000530695 TAL1P17542 331 aaPredicted RBP20.19■□□□□ 0.82
PKP3-207ENST00000530695 SLC39A5Q6ZMH5 540 aa20.19■□□□□ 0.82
PKP3-207ENST00000530695 DDX11Q96FC9 970 aa20.19■□□□□ 0.82
PKP3-207ENST00000530695 LBHD1Q9BQE6 289 aaPredicted RBP20.19■□□□□ 0.82
PKP3-207ENST00000530695 RAVER2Q9HCJ3 691 aaKnown RBP20.19■□□□□ 0.82
PKP3-207ENST00000530695 XPNPEP3Q9NQH7 507 aa20.19■□□□□ 0.82
PKP3-207ENST00000530695 ISY1Q9ULR0 285 aaKnown RBP20.19■□□□□ 0.82
PKP3-207ENST00000530695 ATP11BQ9Y2G3 1177 aa20.19■□□□□ 0.82
PKP3-207ENST00000530695 BMP3P12645 472 aa20.18■□□□□ 0.82
PKP3-207ENST00000530695 ADCYAP1R1P41586 468 aa20.18■□□□□ 0.82
PKP3-207ENST00000530695 CTDSPL2Q05D32 466 aa20.18■□□□□ 0.82
PKP3-207ENST00000530695 LRIT3Q3SXY7 679 aa20.18■□□□□ 0.82
PKP3-207ENST00000530695 MSL3Q8N5Y2 521 aaKnown RBP20.18■□□□□ 0.82
PKP3-207ENST00000530695 FERMT2Q96AC1 680 aa20.18■□□□□ 0.82
PKP3-207ENST00000530695 YTHDC1Q96MU7 727 aaKnown RBP20.18■□□□□ 0.82
PKP3-207ENST00000530695 PRKAG2Q9UGJ0 569 aa20.18■□□□□ 0.82
PKP3-207ENST00000530695 CNPY2Q9Y2B0 182 aa20.18■□□□□ 0.82
PKP3-207ENST00000530695 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.18■□□□□ 0.822e-6■■■■□ 20.8
PKP3-207ENST00000530695 DNAJC25-GNG10A0A024R161 153 aa20.17■□□□□ 0.82
PKP3-207ENST00000530695 TSPY2A6NKD2 308 aa20.17■□□□□ 0.82
PKP3-207ENST00000530695 ZNF865P0CJ78 1059 aaPredicted RBP20.17■□□□□ 0.82
PKP3-207ENST00000530695 OAZ1P54368 228 aa20.17■□□□□ 0.82
PKP3-207ENST00000530695 PPP4R3BQ5MIZ7 849 aa20.17■□□□□ 0.82
PKP3-207ENST00000530695 VPS53Q5VIR6 699 aa20.17■□□□□ 0.82
PKP3-207ENST00000530695 INCENPQ9NQS7 918 aa20.17■□□□□ 0.82
PKP3-207ENST00000530695 HELLSQ9NRZ9 838 aa20.17■□□□□ 0.82
PKP3-207ENST00000530695 TMEM232C9JQI7 657 aa20.16■□□□□ 0.82
PKP3-207ENST00000530695 PGK1P00558 417 aa20.16■□□□□ 0.82
PKP3-207ENST00000530695 AKR1A1P14550 325 aa20.16■□□□□ 0.82
PKP3-207ENST00000530695 STAT2P52630 851 aa20.16■□□□□ 0.82
PKP3-207ENST00000530695 RNF180Q86T96 592 aa20.16■□□□□ 0.82
PKP3-207ENST00000530695 ANKRD35Q8N283 1001 aa20.16■□□□□ 0.82
PKP3-207ENST00000530695 CHMP4CQ96CF2 233 aa20.16■□□□□ 0.82
PKP3-207ENST00000530695 FBXO40Q9UH90 709 aa20.16■□□□□ 0.82
PKP3-207ENST00000530695 STX8Q9UNK0 236 aa20.16■□□□□ 0.82
PKP3-207ENST00000530695 SYNGAP1Q96PV0 1343 aa20.16■□□□□ 0.82
PKP3-207ENST00000530695 FDX1P10109 184 aa20.15■□□□□ 0.82
PKP3-207ENST00000530695 MCCP23508 829 aa20.15■□□□□ 0.82
PKP3-207ENST00000530695 SLC1A4P43007 532 aa20.15■□□□□ 0.82
PKP3-207ENST00000530695 IKQ13123 557 aaPredicted RBP20.15■□□□□ 0.82
PKP3-207ENST00000530695 SNX17Q15036 470 aa20.15■□□□□ 0.82
PKP3-207ENST00000530695 TRIM60Q495X7 471 aa20.15■□□□□ 0.82
PKP3-207ENST00000530695 GPR153Q6NV75 609 aa20.15■□□□□ 0.82
PKP3-207ENST00000530695 MAMDC4Q6UXC1 1216 aa20.15■□□□□ 0.82
PKP3-207ENST00000530695 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.15■□□□□ 0.82
PKP3-207ENST00000530695 CHST13Q8NET6 341 aa20.15■□□□□ 0.82
PKP3-207ENST00000530695 CHURC1Q8WUH1 139 aa20.15■□□□□ 0.82
PKP3-207ENST00000530695 GMCL1Q96IK5 515 aa20.15■□□□□ 0.82
PKP3-207ENST00000530695 IL17RBQ9NRM6 502 aa20.15■□□□□ 0.82
PKP3-207ENST00000530695 ANAPC4Q9UJX5 808 aa20.15■□□□□ 0.82
PKP3-207ENST00000530695 PHF24Q9UPV7 400 aa20.15■□□□□ 0.82
PKP3-207ENST00000530695 RANBP6O60518 1105 aaKnown RBP20.14■□□□□ 0.81
PKP3-207ENST00000530695 NMT2O60551 498 aa20.14■□□□□ 0.81
PKP3-207ENST00000530695 SNAI1O95863 264 aaPredicted RBP20.14■□□□□ 0.81
PKP3-207ENST00000530695 AAMPQ13685 434 aa20.14■□□□□ 0.81
PKP3-207ENST00000530695 ALX1Q15699 326 aa20.14■□□□□ 0.81
PKP3-207ENST00000530695 ZNF467Q7Z7K2 595 aaPredicted RBP20.14■□□□□ 0.81
PKP3-207ENST00000530695 FAM160B2Q86V87 743 aa20.14■□□□□ 0.81
PKP3-207ENST00000530695 STAG1Q8WVM7 1258 aa20.14■□□□□ 0.81
PKP3-207ENST00000530695 LENG1Q96BZ8 264 aaPredicted RBP20.14■□□□□ 0.81
PKP3-207ENST00000530695 FAM227BQ96M60 508 aa20.14■□□□□ 0.81
PKP3-207ENST00000530695 LNPKQ9C0E8 428 aa20.14■□□□□ 0.81
PKP3-207ENST00000530695 PRDM5Q9NQX1 630 aaPredicted RBP20.14■□□□□ 0.81
PKP3-207ENST00000530695 HOMER2Q9NSB8 354 aa20.14■□□□□ 0.81
PKP3-207ENST00000530695 A0A0D9SFI3 127 aa20.13■□□□□ 0.81
PKP3-207ENST00000530695 MCMDC2Q4G0Z9 681 aa20.13■□□□□ 0.81
PKP3-207ENST00000530695 C1orf53Q5VUE5 145 aa20.13■□□□□ 0.81
PKP3-207ENST00000530695 ZHX1Q9UKY1 873 aaPredicted RBP20.13■□□□□ 0.81
PKP3-207ENST00000530695 FAM184BQ9ULE4 1060 aa20.13■□□□□ 0.81
PKP3-207ENST00000530695 TACC3Q9Y6A5 838 aa20.13■□□□□ 0.81
PKP3-207ENST00000530695 TRIM6-TRIM34B2RNG4 842 aa20.12■□□□□ 0.81
PKP3-207ENST00000530695 ORC4O43929 436 aa20.12■□□□□ 0.81
PKP3-207ENST00000530695 B4GALNT3Q6L9W6 998 aa20.12■□□□□ 0.81
PKP3-207ENST00000530695 KCTD1Q719H9 257 aa20.12■□□□□ 0.81
PKP3-207ENST00000530695 TICAM2Q86XR7 235 aa20.12■□□□□ 0.81
PKP3-207ENST00000530695 RWDD1Q9H446 243 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms