RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 FAM160B2Q86V87 743 aa12.83□□□□□ -0.36
CAPN1-218ENST00000530442 RAB11FIP4Q86YS3 637 aa12.83□□□□□ -0.36
CAPN1-218ENST00000530442 STAG2Q8N3U4 1231 aa12.83□□□□□ -0.36
CAPN1-218ENST00000530442 FBXL16Q8N461 479 aa12.83□□□□□ -0.36
CAPN1-218ENST00000530442 BRF1Q92994 677 aa12.83□□□□□ -0.36
CAPN1-218ENST00000530442 KIFC2Q96AC6 838 aa12.83□□□□□ -0.36
CAPN1-218ENST00000530442 KIF2CQ99661 725 aa12.83□□□□□ -0.36
CAPN1-218ENST00000530442 PAGR1Q9BTK6 254 aa12.83□□□□□ -0.36
CAPN1-218ENST00000530442 CPVLQ9H3G5 476 aa12.83□□□□□ -0.36
CAPN1-218ENST00000530442 GPCPD1Q9NPB8 672 aa12.83□□□□□ -0.36
CAPN1-218ENST00000530442 MAD2L2Q9UI95 211 aa12.83□□□□□ -0.36
CAPN1-218ENST00000530442 BRPF3Q9ULD4 1205 aa12.83□□□□□ -0.36
CAPN1-218ENST00000530442 CYP46A1Q9Y6A2 500 aa12.83□□□□□ -0.36
CAPN1-218ENST00000530442 ZNF236Q9UL36 1845 aa12.83□□□□□ -0.36
CAPN1-218ENST00000530442 SMCHD1A6NHR9 2005 aa12.83□□□□□ -0.36
CAPN1-218ENST00000530442 DOCK3Q8IZD9 2030 aa12.83□□□□□ -0.36
CAPN1-218ENST00000530442 NID2Q14112 1375 aa12.82□□□□□ -0.36
CAPN1-218ENST00000530442 PALM3A6NDB9 673 aaPredicted RBP12.82□□□□□ -0.36
CAPN1-218ENST00000530442 PARP1P09874 1014 aaKnown RBP12.82□□□□□ -0.36
CAPN1-218ENST00000530442 CTGFP29279 349 aa12.82□□□□□ -0.36
CAPN1-218ENST00000530442 SLC16A2P36021 539 aa12.82□□□□□ -0.36
CAPN1-218ENST00000530442 SP3Q02447 781 aa12.82□□□□□ -0.36
CAPN1-218ENST00000530442 IKQ13123 557 aaPredicted RBP12.82□□□□□ -0.36
CAPN1-218ENST00000530442 TMEM132BQ14DG7 1078 aa12.82□□□□□ -0.36
CAPN1-218ENST00000530442 APOA5Q6Q788 366 aa12.82□□□□□ -0.36
CAPN1-218ENST00000530442 MICU3Q86XE3 530 aa12.82□□□□□ -0.36
CAPN1-218ENST00000530442 TMTC2Q8N394 836 aa12.82□□□□□ -0.36
CAPN1-218ENST00000530442 PRPF38AQ8NAV1 312 aaKnown RBP12.82□□□□□ -0.36
CAPN1-218ENST00000530442 NUP133Q8WUM0 1156 aa12.82□□□□□ -0.36
CAPN1-218ENST00000530442 TBC1D32Q96NH3 1257 aa12.82□□□□□ -0.36
CAPN1-218ENST00000530442 ARHGAP39Q9C0H5 1083 aa12.82□□□□□ -0.36
CAPN1-218ENST00000530442 UPF2Q9HAU5 1272 aaKnown RBP12.82□□□□□ -0.36
CAPN1-218ENST00000530442 HOXC10Q9NYD6 342 aa12.82□□□□□ -0.36
CAPN1-218ENST00000530442 ZNF214Q9UL59 606 aaPredicted RBP12.82□□□□□ -0.36
CAPN1-218ENST00000530442 PRR12Q9ULL5 1215 aa12.82□□□□□ -0.36
CAPN1-218ENST00000530442 RABGAP1Q9Y3P9 1069 aa12.82□□□□□ -0.36
CAPN1-218ENST00000530442 SLC12A7Q9Y666 1083 aa12.82□□□□□ -0.36
CAPN1-218ENST00000530442 KLF18A0A0U1RQI7 1052 aa12.81□□□□□ -0.36
CAPN1-218ENST00000530442 FKTNO75072 461 aa12.81□□□□□ -0.36
CAPN1-218ENST00000530442 LACTBP83111 547 aaPredicted RBP12.81□□□□□ -0.36
CAPN1-218ENST00000530442 FGD1P98174 961 aa12.81□□□□□ -0.36
CAPN1-218ENST00000530442 APOBRQ0VD83 1088 aa12.81□□□□□ -0.36
CAPN1-218ENST00000530442 SLC35G1Q2M3R5 365 aa12.81□□□□□ -0.36
CAPN1-218ENST00000530442 Q3C1V9 767 aa12.81□□□□□ -0.36
CAPN1-218ENST00000530442 SYDE2Q5VT97 1194 aa12.81□□□□□ -0.36
CAPN1-218ENST00000530442 MB21D1Q8N884 522 aa12.81□□□□□ -0.36
CAPN1-218ENST00000530442 CD99L2Q8TCZ2 262 aa12.81□□□□□ -0.36
CAPN1-218ENST00000530442 CHURC1Q8WUH1 139 aa12.81□□□□□ -0.36
CAPN1-218ENST00000530442 MAP3K14Q99558 947 aa12.81□□□□□ -0.36
CAPN1-218ENST00000530442 RANBP17Q9H2T7 1088 aaKnown RBP12.81□□□□□ -0.36
CAPN1-218ENST00000530442 SLC38A10Q9HBR0 1119 aa12.81□□□□□ -0.36
CAPN1-218ENST00000530442 PDRG1Q9NUG6 133 aa12.81□□□□□ -0.36
CAPN1-218ENST00000530442 BAZ2BQ9UIF8 2168 aaKnown RBP12.81□□□□□ -0.36
CAPN1-218ENST00000530442 LCTP09848 1927 aa12.8□□□□□ -0.36
CAPN1-218ENST00000530442 CENPFP49454 3210 aa12.8□□□□□ -0.36
CAPN1-218ENST00000530442 GOLGA8BA8MQT2 603 aa12.8□□□□□ -0.36
CAPN1-218ENST00000530442 ECM2O94769 699 aaPredicted RBP12.8□□□□□ -0.36
CAPN1-218ENST00000530442 SNAP25P60880 206 aa12.8□□□□□ -0.36
CAPN1-218ENST00000530442 CCDC144CPQ8IYA2 1237 aa12.8□□□□□ -0.36
CAPN1-218ENST00000530442 GPRC5AQ8NFJ5 357 aa12.8□□□□□ -0.36
CAPN1-218ENST00000530442 CTCFLQ8NI51 663 aaPredicted RBP12.8□□□□□ -0.36
CAPN1-218ENST00000530442 UBA5Q9GZZ9 404 aa12.8□□□□□ -0.36
CAPN1-218ENST00000530442 SPATC1LQ9H0A9 340 aa12.8□□□□□ -0.36
CAPN1-218ENST00000530442 PORCNQ9H237 461 aa12.8□□□□□ -0.36
CAPN1-218ENST00000530442 ZNF536O15090 1300 aa12.8□□□□□ -0.36
CAPN1-218ENST00000530442 PLXNA1Q9UIW2 1896 aa12.79□□□□□ -0.36
CAPN1-218ENST00000530442 KLRF2D3W0D1 207 aa12.79□□□□□ -0.36
CAPN1-218ENST00000530442 ZBTB43O43298 467 aa12.79□□□□□ -0.36
CAPN1-218ENST00000530442 CYTH3O43739 400 aa12.79□□□□□ -0.36
CAPN1-218ENST00000530442 PLEKHA8P1O95397 391 aa12.79□□□□□ -0.36
CAPN1-218ENST00000530442 CALM1P0DP23 149 aa12.79□□□□□ -0.36
CAPN1-218ENST00000530442 CALM2P0DP24 149 aa12.79□□□□□ -0.36
CAPN1-218ENST00000530442 CALM3P0DP25 149 aa12.79□□□□□ -0.36
CAPN1-218ENST00000530442 TAL1P17542 331 aaPredicted RBP12.79□□□□□ -0.36
CAPN1-218ENST00000530442 RCAN1P53805 252 aa12.79□□□□□ -0.36
CAPN1-218ENST00000530442 AK2P54819 239 aa12.79□□□□□ -0.36
CAPN1-218ENST00000530442 EVCP57679 992 aa12.79□□□□□ -0.36
CAPN1-218ENST00000530442 NBPF11Q86T75 865 aa12.79□□□□□ -0.36
CAPN1-218ENST00000530442 ERO1AQ96HE7 468 aa12.79□□□□□ -0.36
CAPN1-218ENST00000530442 MOV10L1Q9BXT6 1211 aaKnown RBP12.79□□□□□ -0.36
CAPN1-218ENST00000530442 EFCC1Q9HA90 598 aa12.79□□□□□ -0.36
CAPN1-218ENST00000530442 HPS5Q9UPZ3 1129 aa12.79□□□□□ -0.36
CAPN1-218ENST00000530442 ZNFX1Q9P2E3 1918 aaKnown RBP12.78□□□□□ -0.36
CAPN1-218ENST00000530442 GOLGA8AA7E2F4 631 aa12.78□□□□□ -0.36
CAPN1-218ENST00000530442 ATP2A1O14983 1001 aa12.78□□□□□ -0.36
CAPN1-218ENST00000530442 ZBED4O75132 1171 aa12.78□□□□□ -0.36
CAPN1-218ENST00000530442 FDX1P10109 184 aa12.78□□□□□ -0.36
CAPN1-218ENST00000530442 KIF5BP33176 963 aa12.78□□□□□ -0.36
CAPN1-218ENST00000530442 OAZ1P54368 228 aa12.78□□□□□ -0.36
CAPN1-218ENST00000530442 PLS1Q14651 629 aa12.78□□□□□ -0.36
CAPN1-218ENST00000530442 CDC37Q16543 378 aaPredicted RBP12.78□□□□□ -0.36
CAPN1-218ENST00000530442 RTN1Q16799 776 aa12.78□□□□□ -0.36
CAPN1-218ENST00000530442 SNRNP48Q6IEG0 339 aaKnown RBP12.78□□□□□ -0.36
CAPN1-218ENST00000530442 CCDC174Q6PII3 467 aa12.78□□□□□ -0.36
CAPN1-218ENST00000530442 TMTC3Q6ZXV5 915 aa12.78□□□□□ -0.36
CAPN1-218ENST00000530442 ADGRF4Q8IZF3 695 aa12.78□□□□□ -0.36
CAPN1-218ENST00000530442 CPXCR1Q8N123 301 aa12.78□□□□□ -0.36
CAPN1-218ENST00000530442 FANCBQ8NB91 859 aa12.78□□□□□ -0.36
CAPN1-218ENST00000530442 TRIM47Q96LD4 638 aa12.78□□□□□ -0.36
CAPN1-218ENST00000530442 LARP6Q9BRS8 491 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms