RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 UBE2OQ9C0C9 1292 aaKnown RBP24.84■■□□□ 1.57
SMPD1-204ENST00000530395 FEM1BQ9UK73 627 aa24.84■■□□□ 1.57
SMPD1-204ENST00000530395 SMCHD1A6NHR9 2005 aa24.83■■□□□ 1.57
SMPD1-204ENST00000530395 TFAP4Q01664 338 aa24.83■■□□□ 1.57
SMPD1-204ENST00000530395 TDHQ8IZJ6 230 aa24.83■■□□□ 1.57
SMPD1-204ENST00000530395 ATP2A1O14983 1001 aa24.82■■□□□ 1.56
SMPD1-204ENST00000530395 FAM47AQ5JRC9 791 aa24.82■■□□□ 1.56
SMPD1-204ENST00000530395 SLFN13Q68D06 897 aa24.82■■□□□ 1.56
SMPD1-204ENST00000530395 CPXCR1Q8N123 301 aa24.82■■□□□ 1.56
SMPD1-204ENST00000530395 DDX11Q96FC9 970 aa24.82■■□□□ 1.56
SMPD1-204ENST00000530395 PRKAG2Q9UGJ0 569 aa24.82■■□□□ 1.56
SMPD1-204ENST00000530395 ISY1Q9ULR0 285 aaKnown RBP24.82■■□□□ 1.56
SMPD1-204ENST00000530395 SOX1O00570 391 aaPredicted RBP24.81■■□□□ 1.56
SMPD1-204ENST00000530395 RARBP10826 455 aa24.81■■□□□ 1.56
SMPD1-204ENST00000530395 BMP3P12645 472 aa24.81■■□□□ 1.56
SMPD1-204ENST00000530395 SLC4A3P48751 1232 aa24.81■■□□□ 1.56
SMPD1-204ENST00000530395 RTP1P59025 263 aa24.81■■□□□ 1.56
SMPD1-204ENST00000530395 AAMPQ13685 434 aa24.81■■□□□ 1.56
SMPD1-204ENST00000530395 CCDC129Q6ZRS4 1044 aa24.81■■□□□ 1.56
SMPD1-204ENST00000530395 SLC38A10Q9HBR0 1119 aa24.81■■□□□ 1.56
SMPD1-204ENST00000530395 CNPY2Q9Y2B0 182 aa24.81■■□□□ 1.56
SMPD1-204ENST00000530395 PDE1AP54750 535 aa24.8■■□□□ 1.56
SMPD1-204ENST00000530395 LRRC41Q15345 812 aa24.8■■□□□ 1.56
SMPD1-204ENST00000530395 MSL3Q8N5Y2 521 aaKnown RBP24.8■■□□□ 1.56
SMPD1-204ENST00000530395 LRCH3Q96II8 777 aa24.8■■□□□ 1.56
SMPD1-204ENST00000530395 LBHD1Q9BQE6 289 aaPredicted RBP24.8■■□□□ 1.56
SMPD1-204ENST00000530395 XPNPEP3Q9NQH7 507 aa24.8■■□□□ 1.56
SMPD1-204ENST00000530395 HELLSQ9NRZ9 838 aa24.8■■□□□ 1.56
SMPD1-204ENST00000530395 FBXO40Q9UH90 709 aa24.8■■□□□ 1.56
SMPD1-204ENST00000530395 RIPK3Q9Y572 518 aa24.8■■□□□ 1.56
SMPD1-204ENST00000530395 TSPY2A6NKD2 308 aa24.79■■□□□ 1.56
SMPD1-204ENST00000530395 FDX1P10109 184 aa24.79■■□□□ 1.56
SMPD1-204ENST00000530395 OAZ1P54368 228 aa24.79■■□□□ 1.56
SMPD1-204ENST00000530395 MDM2Q00987 491 aaPredicted RBP24.79■■□□□ 1.56
SMPD1-204ENST00000530395 YTHDC1Q96MU7 727 aaKnown RBP24.79■■□□□ 1.56
SMPD1-204ENST00000530395 RAVER2Q9HCJ3 691 aaKnown RBP24.79■■□□□ 1.56
SMPD1-204ENST00000530395 ATP11BQ9Y2G3 1177 aa24.79■■□□□ 1.56
SMPD1-204ENST00000530395 AKR1A1P14550 325 aa24.78■■□□□ 1.56
SMPD1-204ENST00000530395 STAT2P52630 851 aa24.78■■□□□ 1.56
SMPD1-204ENST00000530395 CTDSPL2Q05D32 466 aa24.78■■□□□ 1.56
SMPD1-204ENST00000530395 LRIT3Q3SXY7 679 aa24.78■■□□□ 1.56
SMPD1-204ENST00000530395 SLC39A5Q6ZMH5 540 aa24.78■■□□□ 1.56
SMPD1-204ENST00000530395 RNF180Q86T96 592 aa24.78■■□□□ 1.56
SMPD1-204ENST00000530395 TICAM2Q86XR7 235 aa24.78■■□□□ 1.56
SMPD1-204ENST00000530395 STX8Q9UNK0 236 aa24.78■■□□□ 1.56
SMPD1-204ENST00000530395 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.78■■□□□ 1.56
SMPD1-204ENST00000530395 SYNGAP1Q96PV0 1343 aa24.78■■□□□ 1.56
SMPD1-204ENST00000530395 LTBP2Q14767 1821 aa24.77■■□□□ 1.56
SMPD1-204ENST00000530395 FOXP2O15409 715 aa24.77■■□□□ 1.56
SMPD1-204ENST00000530395 ADCYAP1R1P41586 468 aa24.77■■□□□ 1.56
SMPD1-204ENST00000530395 IKQ13123 557 aaPredicted RBP24.77■■□□□ 1.56
SMPD1-204ENST00000530395 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.77■■□□□ 1.56
SMPD1-204ENST00000530395 FAM160B2Q86V87 743 aa24.77■■□□□ 1.56
SMPD1-204ENST00000530395 ANKRD35Q8N283 1001 aa24.77■■□□□ 1.56
SMPD1-204ENST00000530395 CHST13Q8NET6 341 aa24.77■■□□□ 1.56
SMPD1-204ENST00000530395 CHURC1Q8WUH1 139 aa24.77■■□□□ 1.56
SMPD1-204ENST00000530395 GMCL1Q96IK5 515 aa24.77■■□□□ 1.56
SMPD1-204ENST00000530395 ANAPC4Q9UJX5 808 aa24.77■■□□□ 1.56
SMPD1-204ENST00000530395 DNAJC25-GNG10A0A024R161 153 aa24.76■■□□□ 1.55
SMPD1-204ENST00000530395 TMEM232C9JQI7 657 aa24.76■■□□□ 1.55
SMPD1-204ENST00000530395 ZNF865P0CJ78 1059 aaPredicted RBP24.76■■□□□ 1.55
SMPD1-204ENST00000530395 SLC1A4P43007 532 aa24.76■■□□□ 1.55
SMPD1-204ENST00000530395 GPR153Q6NV75 609 aa24.76■■□□□ 1.55
SMPD1-204ENST00000530395 ZNF467Q7Z7K2 595 aaPredicted RBP24.76■■□□□ 1.55
SMPD1-204ENST00000530395 RANBP6O60518 1105 aaKnown RBP24.75■■□□□ 1.55
SMPD1-204ENST00000530395 TAL1P17542 331 aaPredicted RBP24.75■■□□□ 1.55
SMPD1-204ENST00000530395 SNX17Q15036 470 aa24.75■■□□□ 1.55
SMPD1-204ENST00000530395 MCMDC2Q4G0Z9 681 aa24.75■■□□□ 1.55
SMPD1-204ENST00000530395 VPS53Q5VIR6 699 aa24.75■■□□□ 1.55
SMPD1-204ENST00000530395 MAMDC4Q6UXC1 1216 aa24.75■■□□□ 1.55
SMPD1-204ENST00000530395 FERMT2Q96AC1 680 aa24.75■■□□□ 1.55
SMPD1-204ENST00000530395 PHF24Q9UPV7 400 aa24.75■■□□□ 1.55
SMPD1-204ENST00000530395 MCM3APO60318 1980 aa24.74■■□□□ 1.55
SMPD1-204ENST00000530395 ALX1Q15699 326 aa24.74■■□□□ 1.55
SMPD1-204ENST00000530395 TRIM60Q495X7 471 aa24.74■■□□□ 1.55
SMPD1-204ENST00000530395 STAG1Q8WVM7 1258 aa24.74■■□□□ 1.55
SMPD1-204ENST00000530395 LNPKQ9C0E8 428 aa24.74■■□□□ 1.55
SMPD1-204ENST00000530395 RWDD1Q9H446 243 aaPredicted RBP24.74■■□□□ 1.55
SMPD1-204ENST00000530395 TRIM6-TRIM34B2RNG4 842 aa24.73■■□□□ 1.55
SMPD1-204ENST00000530395 ORC4O43929 436 aa24.73■■□□□ 1.55
SMPD1-204ENST00000530395 PGK1P00558 417 aa24.73■■□□□ 1.55
SMPD1-204ENST00000530395 MCCP23508 829 aa24.73■■□□□ 1.55
SMPD1-204ENST00000530395 C1orf53Q5VUE5 145 aa24.73■■□□□ 1.55
SMPD1-204ENST00000530395 FAM227BQ96M60 508 aa24.73■■□□□ 1.55
SMPD1-204ENST00000530395 PRDM5Q9NQX1 630 aaPredicted RBP24.73■■□□□ 1.55
SMPD1-204ENST00000530395 HOMER2Q9NSB8 354 aa24.73■■□□□ 1.55
SMPD1-204ENST00000530395 ZHX1Q9UKY1 873 aaPredicted RBP24.73■■□□□ 1.55
SMPD1-204ENST00000530395 FAM184BQ9ULE4 1060 aa24.73■■□□□ 1.55
SMPD1-204ENST00000530395 LAMA2P24043 3122 aaKnown RBP24.73■■□□□ 1.55
SMPD1-204ENST00000530395 A0A0D9SFI3 127 aa24.72■■□□□ 1.55
SMPD1-204ENST00000530395 PLA2G6O60733 806 aa24.72■■□□□ 1.55
SMPD1-204ENST00000530395 SNAI1O95863 264 aaPredicted RBP24.72■■□□□ 1.55
SMPD1-204ENST00000530395 ACAD9Q9H845 621 aa24.72■■□□□ 1.55
SMPD1-204ENST00000530395 INCENPQ9NQS7 918 aa24.72■■□□□ 1.55
SMPD1-204ENST00000530395 IL17RBQ9NRM6 502 aa24.72■■□□□ 1.55
SMPD1-204ENST00000530395 TOMM22Q9NS69 142 aa24.72■■□□□ 1.55
SMPD1-204ENST00000530395 ZMYM6O95789 1325 aa24.71■■□□□ 1.55
SMPD1-204ENST00000530395 NMT2O60551 498 aa24.71■■□□□ 1.55
SMPD1-204ENST00000530395 RCSD1Q6JBY9 416 aa24.71■■□□□ 1.55
SMPD1-204ENST00000530395 CHMP4CQ96CF2 233 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms