RNA–Protein interactions for RNA: ENST00000530296.5

CTSB-217, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-217ENST00000530296 TRIB2Q92519 343 aa16.53■□□□□ 0.24
CTSB-217ENST00000530296 ZSCAN10Q96SZ4 725 aaPredicted RBP16.53■□□□□ 0.24
CTSB-217ENST00000530296 MTA3Q9BTC8 594 aa16.53■□□□□ 0.24
CTSB-217ENST00000530296 ZSWIM5Q9P217 1185 aa16.53■□□□□ 0.24
CTSB-217ENST00000530296 SOX1O00570 391 aaPredicted RBP16.52■□□□□ 0.24
CTSB-217ENST00000530296 MCCP23508 829 aa16.52■□□□□ 0.24
CTSB-217ENST00000530296 RGS2P41220 211 aa16.52■□□□□ 0.24
CTSB-217ENST00000530296 SPICE1Q8N0Z3 855 aa16.52■□□□□ 0.24
CTSB-217ENST00000530296 LRCH3Q96II8 777 aa16.52■□□□□ 0.24
CTSB-217ENST00000530296 A0A0C4DFX4 3053 aa16.52■□□□□ 0.23
CTSB-217ENST00000530296 NMT2O60551 498 aa16.51■□□□□ 0.23
CTSB-217ENST00000530296 NDUFB10O96000 172 aa16.51■□□□□ 0.23
CTSB-217ENST00000530296 PRKAR2AP13861 404 aaKnown RBP16.51■□□□□ 0.23
CTSB-217ENST00000530296 ERVK-9P63128 1117 aa16.51■□□□□ 0.23
CTSB-217ENST00000530296 ERVK-24P63145 666 aa16.51■□□□□ 0.23
CTSB-217ENST00000530296 CCNA1P78396 465 aa16.51■□□□□ 0.23
CTSB-217ENST00000530296 TSGA10IPQ3SY00 556 aa16.51■□□□□ 0.23
CTSB-217ENST00000530296 SLFN13Q68D06 897 aa16.51■□□□□ 0.23
CTSB-217ENST00000530296 LBX2Q6XYB7 198 aa16.51■□□□□ 0.23
CTSB-217ENST00000530296 LRRC47Q8N1G4 583 aaKnown RBP16.51■□□□□ 0.23
CTSB-217ENST00000530296 DEFB123Q8N688 67 aa16.51■□□□□ 0.23
CTSB-217ENST00000530296 MB21D1Q8N884 522 aa16.51■□□□□ 0.23
CTSB-217ENST00000530296 ANKS1AQ92625 1134 aa16.51■□□□□ 0.23
CTSB-217ENST00000530296 GMCL1Q96IK5 515 aa16.51■□□□□ 0.23
CTSB-217ENST00000530296 P2RX7Q99572 595 aaKnown RBP16.51■□□□□ 0.23
CTSB-217ENST00000530296 MYH4Q9Y623 1939 aa16.51■□□□□ 0.23
CTSB-217ENST00000530296 FLOT1O75955 427 aa16.5■□□□□ 0.23
CTSB-217ENST00000530296 HMGB1P09429 215 aaKnown RBP16.5■□□□□ 0.23
CTSB-217ENST00000530296 CYP2B6P20813 491 aa16.5■□□□□ 0.23
CTSB-217ENST00000530296 MCM5P33992 734 aa16.5■□□□□ 0.23
CTSB-217ENST00000530296 SLC1A4P43007 532 aa16.5■□□□□ 0.23
CTSB-217ENST00000530296 RCSD1Q6JBY9 416 aa16.5■□□□□ 0.23
CTSB-217ENST00000530296 APBA2Q99767 749 aa16.5■□□□□ 0.23
CTSB-217ENST00000530296 TMEM47Q9BQJ4 181 aa16.5■□□□□ 0.23
CTSB-217ENST00000530296 UBE2OQ9C0C9 1292 aaKnown RBP16.5■□□□□ 0.23
CTSB-217ENST00000530296 KAT14Q9H8E8 782 aa16.5■□□□□ 0.23
CTSB-217ENST00000530296 CWC22Q9HCG8 908 aaKnown RBP16.5■□□□□ 0.23
CTSB-217ENST00000530296 FEM1BQ9UK73 627 aa16.5■□□□□ 0.23
CTSB-217ENST00000530296 ZMYND8Q9ULU4 1186 aaPredicted RBP16.5■□□□□ 0.23
CTSB-217ENST00000530296 STXBP5LQ9Y2K9 1186 aa16.5■□□□□ 0.23
CTSB-217ENST00000530296 RABGAP1Q9Y3P9 1069 aa16.5■□□□□ 0.23
CTSB-217ENST00000530296 PLXNB2O15031 1838 aa16.49■□□□□ 0.23
CTSB-217ENST00000530296 TNKSO95271 1327 aa16.49■□□□□ 0.23
CTSB-217ENST00000530296 MSCO60682 206 aa16.49■□□□□ 0.23
CTSB-217ENST00000530296 FDX1P10109 184 aa16.49■□□□□ 0.23
CTSB-217ENST00000530296 BMP3P12645 472 aa16.49■□□□□ 0.23
CTSB-217ENST00000530296 HSPA4P34932 840 aa16.49■□□□□ 0.23
CTSB-217ENST00000530296 MAGEA10P43363 369 aaPredicted RBP16.49■□□□□ 0.23
CTSB-217ENST00000530296 FAM83BQ5T0W9 1011 aa16.49■□□□□ 0.23
CTSB-217ENST00000530296 IFIT1BQ5T764 474 aaKnown RBP16.49■□□□□ 0.23
CTSB-217ENST00000530296 PLEKHH3Q7Z736 793 aa16.49■□□□□ 0.23
CTSB-217ENST00000530296 TMTC2Q8N394 836 aa16.49■□□□□ 0.23
CTSB-217ENST00000530296 PRPF38AQ8NAV1 312 aaKnown RBP16.49■□□□□ 0.23
CTSB-217ENST00000530296 CHURC1Q8WUH1 139 aa16.49■□□□□ 0.23
CTSB-217ENST00000530296 DCAF4Q8WV16 495 aa16.49■□□□□ 0.23
CTSB-217ENST00000530296 USP6NLQ92738 828 aa16.49■□□□□ 0.23
CTSB-217ENST00000530296 ZKSCAN3Q9BRR0 538 aa16.49■□□□□ 0.23
CTSB-217ENST00000530296 IFIT3O14879 490 aaKnown RBP16.48■□□□□ 0.23
CTSB-217ENST00000530296 COL6A1P12109 1028 aa16.48■□□□□ 0.23
CTSB-217ENST00000530296 DSG3P32926 999 aa16.48■□□□□ 0.23
CTSB-217ENST00000530296 CACNB2Q08289 660 aaPredicted RBP16.48■□□□□ 0.23
CTSB-217ENST00000530296 TRIM32Q13049 653 aa16.48■□□□□ 0.23
CTSB-217ENST00000530296 KIAA1755Q5JYT7 1200 aa16.48■□□□□ 0.23
CTSB-217ENST00000530296 MORN1Q5T089 497 aa16.48■□□□□ 0.23
CTSB-217ENST00000530296 GPR142Q7Z601 462 aa16.48■□□□□ 0.23
CTSB-217ENST00000530296 FAM160B2Q86V87 743 aa16.48■□□□□ 0.23
CTSB-217ENST00000530296 ENAHQ8N8S7 591 aaPredicted RBP16.48■□□□□ 0.23
CTSB-217ENST00000530296 TMEM87BQ96K49 555 aa16.48■□□□□ 0.23
CTSB-217ENST00000530296 NEK1Q96PY6 1258 aa16.48■□□□□ 0.23
CTSB-217ENST00000530296 RBPJLQ9UBG7 517 aa16.48■□□□□ 0.23
CTSB-217ENST00000530296 ISY1Q9ULR0 285 aaKnown RBP16.48■□□□□ 0.23
CTSB-217ENST00000530296 WDR19Q8NEZ3 1342 aa16.47■□□□□ 0.23
CTSB-217ENST00000530296 SPDYE16A6NNV3 312 aaPredicted RBP16.47■□□□□ 0.23
CTSB-217ENST00000530296 PLA2G6O60733 806 aa16.47■□□□□ 0.23
CTSB-217ENST00000530296 PSMA5P28066 241 aa16.47■□□□□ 0.23
CTSB-217ENST00000530296 STAT2P52630 851 aa16.47■□□□□ 0.23
CTSB-217ENST00000530296 WTAPQ15007 396 aa16.47■□□□□ 0.23
CTSB-217ENST00000530296 GPATCH4Q5T3I0 446 aaKnown RBP16.47■□□□□ 0.23
CTSB-217ENST00000530296 MFSD14CQ5VZR4 134 aa16.47■□□□□ 0.23
CTSB-217ENST00000530296 STOX1Q6ZVD7 989 aa16.47■□□□□ 0.23
CTSB-217ENST00000530296 MB21D2Q8IYB1 491 aaPredicted RBP16.47■□□□□ 0.23
CTSB-217ENST00000530296 PNMA1Q8ND90 353 aa16.47■□□□□ 0.23
CTSB-217ENST00000530296 KCNB2Q92953 911 aa16.47■□□□□ 0.23
CTSB-217ENST00000530296 SLF1Q9BQI6 1058 aa16.47■□□□□ 0.23
CTSB-217ENST00000530296 TXNRD2Q9NNW7 524 aa16.47■□□□□ 0.23
CTSB-217ENST00000530296 PPP1R9AQ9ULJ8 1098 aa16.47■□□□□ 0.23
CTSB-217ENST00000530296 CTDP1Q9Y5B0 961 aaPredicted RBP16.47■□□□□ 0.23
CTSB-217ENST00000530296 PFASO15067 1338 aa16.46■□□□□ 0.23
CTSB-217ENST00000530296 SYN1P17600 705 aa16.46■□□□□ 0.23
CTSB-217ENST00000530296 IKQ13123 557 aaPredicted RBP16.46■□□□□ 0.23
CTSB-217ENST00000530296 MAP2K5Q13163 448 aa16.46■□□□□ 0.23
CTSB-217ENST00000530296 CCDC96Q2M329 555 aa16.46■□□□□ 0.23
CTSB-217ENST00000530296 TMEM67Q5HYA8 995 aa16.46■□□□□ 0.23
CTSB-217ENST00000530296 CYB5R4Q7L1T6 521 aa16.46■□□□□ 0.23
CTSB-217ENST00000530296 PAGR1Q9BTK6 254 aa16.46■□□□□ 0.23
CTSB-217ENST00000530296 USP26Q9BXU7 913 aa16.46■□□□□ 0.23
CTSB-217ENST00000530296 IVNS1ABPQ9Y6Y0 642 aa16.46■□□□□ 0.23
CTSB-217ENST00000530296 TMEM232C9JQI7 657 aa16.45■□□□□ 0.22
CTSB-217ENST00000530296 PRC1O43663 620 aa16.45■□□□□ 0.22
CTSB-217ENST00000530296 COPB2P35606 906 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms