RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 GJC1P36383 396 aa13.81□□□□□ -0.2
SCN3B-206ENST00000530277 IFFO1Q0D2I5 559 aa13.81□□□□□ -0.2
SCN3B-206ENST00000530277 KMT5BQ4FZB7 885 aa13.81□□□□□ -0.2
SCN3B-206ENST00000530277 COL15A1P39059 1388 aa13.81□□□□□ -0.2
SCN3B-206ENST00000530277 ANKRD65E5RJM6 399 aa13.81□□□□□ -0.2
SCN3B-206ENST00000530277 MAGEA1P43355 309 aa13.81□□□□□ -0.2
SCN3B-206ENST00000530277 SMC1AQ14683 1233 aaKnown RBP13.81□□□□□ -0.2
SCN3B-206ENST00000530277 OR8K1Q8NGG5 319 aa13.81□□□□□ -0.2
SCN3B-206ENST00000530277 DBNDD1Q9H9R9 158 aa13.81□□□□□ -0.2
SCN3B-206ENST00000530277 TFR2Q9UP52 801 aa13.81□□□□□ -0.2
SCN3B-206ENST00000530277 SRPRBQ9Y5M8 271 aaKnown RBP13.81□□□□□ -0.2
SCN3B-206ENST00000530277 TTC19Q6DKK2 380 aaPredicted RBP13.8□□□□□ -0.2
SCN3B-206ENST00000530277 TMTC1Q8IUR5 882 aa13.8□□□□□ -0.2
SCN3B-206ENST00000530277 KLHL7Q8IXQ5 586 aa13.8□□□□□ -0.2
SCN3B-206ENST00000530277 WDR24Q96S15 920 aa13.8□□□□□ -0.2
SCN3B-206ENST00000530277 CALCOCO1Q9P1Z2 691 aa13.8□□□□□ -0.2
SCN3B-206ENST00000530277 PCDHB13Q9Y5F0 798 aa13.8□□□□□ -0.2
SCN3B-206ENST00000530277 BICDL2A1A5D9 508 aa13.8□□□□□ -0.2
SCN3B-206ENST00000530277 IKBKBO14920 756 aa13.8□□□□□ -0.2
SCN3B-206ENST00000530277 SRGAP2O75044 1071 aa13.8□□□□□ -0.2
SCN3B-206ENST00000530277 ADCY7P51828 1080 aa13.8□□□□□ -0.2
SCN3B-206ENST00000530277 DMTNQ08495 405 aa13.8□□□□□ -0.2
SCN3B-206ENST00000530277 ADAT2Q7Z6V5 191 aaKnown RBP13.8□□□□□ -0.2
SCN3B-206ENST00000530277 TBCKQ8TEA7 893 aa13.8□□□□□ -0.2
SCN3B-206ENST00000530277 SMCR8Q8TEV9 937 aaPredicted RBP13.8□□□□□ -0.2
SCN3B-206ENST00000530277 FAM84BQ96KN1 310 aaPredicted RBP13.8□□□□□ -0.2
SCN3B-206ENST00000530277 DCP1AQ9NPI6 582 aaPredicted RBP13.8□□□□□ -0.2
SCN3B-206ENST00000530277 TLDC2A0PJX2 215 aa13.8□□□□□ -0.2
SCN3B-206ENST00000530277 MEIS1O00470 390 aa13.8□□□□□ -0.2
SCN3B-206ENST00000530277 CCZ1BP86790 482 aa13.8□□□□□ -0.2
SCN3B-206ENST00000530277 CCZ1P86791 482 aaPredicted RBP13.8□□□□□ -0.2
SCN3B-206ENST00000530277 ITPK1Q13572 414 aa13.8□□□□□ -0.2
SCN3B-206ENST00000530277 VPS36Q86VN1 386 aa13.8□□□□□ -0.2
SCN3B-206ENST00000530277 KSR1Q8IVT5 923 aa13.8□□□□□ -0.2
SCN3B-206ENST00000530277 TIGD1Q96MW7 591 aa13.8□□□□□ -0.2
SCN3B-206ENST00000530277 KIAA0754O94854 1291 aa13.79□□□□□ -0.2
SCN3B-206ENST00000530277 MRPL12P52815 198 aaKnown RBP13.79□□□□□ -0.2
SCN3B-206ENST00000530277 CCDC174Q6PII3 467 aa13.79□□□□□ -0.2
SCN3B-206ENST00000530277 ZNF710Q8N1W2 664 aa13.79□□□□□ -0.2
SCN3B-206ENST00000530277 ENGASEQ8NFI3 743 aa13.79□□□□□ -0.2
SCN3B-206ENST00000530277 GJA10Q969M2 543 aa13.79□□□□□ -0.2
SCN3B-206ENST00000530277 ERVV-1B6SEH8 477 aa13.79□□□□□ -0.2
SCN3B-206ENST00000530277 PRR16Q569H4 304 aa13.79□□□□□ -0.2
SCN3B-206ENST00000530277 GPATCH11Q8N954 259 aa13.79□□□□□ -0.2
SCN3B-206ENST00000530277 EPN1Q9Y6I3 576 aaPredicted RBP13.79□□□□□ -0.2
SCN3B-206ENST00000530277 TNS3Q68CZ2 1445 aa13.79□□□□□ -0.2
SCN3B-206ENST00000530277 RIMBP3CA6NJZ7 1639 aa13.79□□□□□ -0.2
SCN3B-206ENST00000530277 RIMBP3BA6NNM3 1639 aa13.79□□□□□ -0.2
SCN3B-206ENST00000530277 RIMBP3Q9UFD9 1639 aa13.79□□□□□ -0.2
SCN3B-206ENST00000530277 OR52Z1P0C646 297 aa13.79□□□□□ -0.2
SCN3B-206ENST00000530277 CASP7P55210 303 aa13.79□□□□□ -0.2
SCN3B-206ENST00000530277 TUBGCP2Q9BSJ2 902 aa13.79□□□□□ -0.2
SCN3B-206ENST00000530277 STX10O60499 249 aa13.78□□□□□ -0.2
SCN3B-206ENST00000530277 TRIM37O94972 964 aa13.78□□□□□ -0.2
SCN3B-206ENST00000530277 PLCG2P16885 1265 aa13.78□□□□□ -0.2
SCN3B-206ENST00000530277 KRT31Q15323 416 aa13.78□□□□□ -0.2
SCN3B-206ENST00000530277 SRBD1Q8N5C6 995 aaKnown RBP13.78□□□□□ -0.2
SCN3B-206ENST00000530277 IFIH1Q9BYX4 1025 aaKnown RBP13.78□□□□□ -0.2
SCN3B-206ENST00000530277 GTPBP4Q9BZE4 634 aaKnown RBP13.78□□□□□ -0.2
SCN3B-206ENST00000530277 SPATA31D1Q6ZQQ2 1576 aa13.78□□□□□ -0.2
SCN3B-206ENST00000530277 PSDA5PKW4 1024 aaPredicted RBP13.78□□□□□ -0.2
SCN3B-206ENST00000530277 GDF11O95390 407 aa13.78□□□□□ -0.2
SCN3B-206ENST00000530277 PLCG1P19174 1290 aa13.78□□□□□ -0.2
SCN3B-206ENST00000530277 HPDP32754 393 aaPredicted RBP13.78□□□□□ -0.2
SCN3B-206ENST00000530277 SETQ01105 290 aaPredicted RBP13.78□□□□□ -0.2
SCN3B-206ENST00000530277 SARM1Q6SZW1 724 aa13.78□□□□□ -0.2
SCN3B-206ENST00000530277 ILDR1Q86SU0 546 aaPredicted RBP13.78□□□□□ -0.2
SCN3B-206ENST00000530277 ATRIPQ8WXE1 791 aa13.78□□□□□ -0.2
SCN3B-206ENST00000530277 PDE11AQ9HCR9 933 aa13.78□□□□□ -0.2
SCN3B-206ENST00000530277 TMEM260Q9NX78 707 aa13.78□□□□□ -0.2
SCN3B-206ENST00000530277 GTPBP6O43824 516 aaPredicted RBP13.78□□□□□ -0.2
SCN3B-206ENST00000530277 CSF1RP07333 972 aa13.78□□□□□ -0.2
SCN3B-206ENST00000530277 CDC25BP30305 580 aa13.78□□□□□ -0.2
SCN3B-206ENST00000530277 PRKG1Q13976 671 aa13.78□□□□□ -0.2
SCN3B-206ENST00000530277 SND1Q7KZF4 910 aaKnown RBP eCLIP13.78□□□□□ -0.2
SCN3B-206ENST00000530277 NEK8Q86SG6 692 aa13.78□□□□□ -0.2
SCN3B-206ENST00000530277 STAG1Q8WVM7 1258 aa13.78□□□□□ -0.2
SCN3B-206ENST00000530277 ITSN1Q15811 1721 aa13.77□□□□□ -0.2
SCN3B-206ENST00000530277 POTEMA6NI47 508 aa13.77□□□□□ -0.2
SCN3B-206ENST00000530277 HGSO14964 777 aaPredicted RBP13.77□□□□□ -0.2
SCN3B-206ENST00000530277 EVX2Q03828 476 aa13.77□□□□□ -0.2
SCN3B-206ENST00000530277 ATP8A2Q9NTI2 1148 aa13.77□□□□□ -0.2
SCN3B-206ENST00000530277 CNNM4Q6P4Q7 775 aa13.77□□□□□ -0.21
SCN3B-206ENST00000530277 RASGRP2Q7LDG7 609 aa13.77□□□□□ -0.21
SCN3B-206ENST00000530277 KRT25Q7Z3Z0 450 aa13.77□□□□□ -0.21
SCN3B-206ENST00000530277 ADGRA1Q86SQ6 560 aa13.77□□□□□ -0.21
SCN3B-206ENST00000530277 ENOX1Q8TC92 643 aaKnown RBP13.77□□□□□ -0.21
SCN3B-206ENST00000530277 CNOT6LQ96LI5 555 aaKnown RBP13.77□□□□□ -0.21
SCN3B-206ENST00000530277 PARD6BQ9BYG5 372 aa13.77□□□□□ -0.21
SCN3B-206ENST00000530277 PCDHA12Q9UN75 941 aa13.77□□□□□ -0.21
SCN3B-206ENST00000530277 TCHHQ07283 1943 aa13.77□□□□□ -0.21
SCN3B-206ENST00000530277 FAM13AO94988 1023 aa13.77□□□□□ -0.21
SCN3B-206ENST00000530277 TRIM28Q13263 835 aaKnown RBP13.77□□□□□ -0.21
SCN3B-206ENST00000530277 TMTC3Q6ZXV5 915 aa13.77□□□□□ -0.21
SCN3B-206ENST00000530277 RBM17Q96I25 401 aaKnown RBP13.77□□□□□ -0.21
SCN3B-206ENST00000530277 GSDMAQ96QA5 445 aa13.77□□□□□ -0.21
SCN3B-206ENST00000530277 PRDM4Q9UKN5 801 aa13.77□□□□□ -0.21
SCN3B-206ENST00000530277 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.77□□□□□ -0.21
SCN3B-206ENST00000530277 GUCY2FP51841 1108 aa13.76□□□□□ -0.21
SCN3B-206ENST00000530277 EHBP1Q8NDI1 1231 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms