RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 ATP5JP18859 108 aa19.3■□□□□ 0.68
COL16A1-216ENST00000529928 GRIN2CQ14957 1233 aa19.3■□□□□ 0.68
COL16A1-216ENST00000529928 UBE3CQ15386 1083 aa19.3■□□□□ 0.68
COL16A1-216ENST00000529928 MAMDC4Q6UXC1 1216 aa19.3■□□□□ 0.68
COL16A1-216ENST00000529928 KLHDC9Q8NEP7 349 aa19.3■□□□□ 0.68
COL16A1-216ENST00000529928 DDX11Q96FC9 970 aa19.3■□□□□ 0.68
COL16A1-216ENST00000529928 SLF1Q9BQI6 1058 aa19.3■□□□□ 0.68
COL16A1-216ENST00000529928 BCL11AQ9H165 835 aa19.3■□□□□ 0.68
COL16A1-216ENST00000529928 BOLA2Q9H3K6 86 aa19.3■□□□□ 0.68
COL16A1-216ENST00000529928 SLC4A4Q9Y6R1 1079 aa19.3■□□□□ 0.68
COL16A1-216ENST00000529928 ZBED9Q6R2W3 1325 aa19.29■□□□□ 0.68
COL16A1-216ENST00000529928 TIMP1P01033 207 aa19.29■□□□□ 0.68
COL16A1-216ENST00000529928 KCNA10Q16322 511 aa19.29■□□□□ 0.68
COL16A1-216ENST00000529928 SNRNP48Q6IEG0 339 aaKnown RBP19.29■□□□□ 0.68
COL16A1-216ENST00000529928 CTR9Q6PD62 1173 aa19.29■□□□□ 0.68
COL16A1-216ENST00000529928 CCDC174Q6PII3 467 aa19.29■□□□□ 0.68
COL16A1-216ENST00000529928 GLT1D1Q96MS3 346 aa19.29■□□□□ 0.68
COL16A1-216ENST00000529928 HAUS7Q99871 368 aa19.29■□□□□ 0.68
COL16A1-216ENST00000529928 ZNF576Q9H609 170 aa19.29■□□□□ 0.68
COL16A1-216ENST00000529928 ARPP21Q9UBL0 812 aaPredicted RBP19.29■□□□□ 0.68
COL16A1-216ENST00000529928 ELP1O95163 1332 aa19.28■□□□□ 0.68
COL16A1-216ENST00000529928 DNAJC25-GNG10A0A024R161 153 aa19.28■□□□□ 0.68
COL16A1-216ENST00000529928 DUSP11O75319 330 aaKnown RBP19.28■□□□□ 0.68
COL16A1-216ENST00000529928 SNAI1O95863 264 aaPredicted RBP19.28■□□□□ 0.68
COL16A1-216ENST00000529928 MS4A1P11836 297 aa19.28■□□□□ 0.68
COL16A1-216ENST00000529928 CST5P28325 142 aaPredicted RBP19.28■□□□□ 0.68
COL16A1-216ENST00000529928 HNRNPUQ00839 825 aaKnown RBP eCLIP19.28■□□□□ 0.68
COL16A1-216ENST00000529928 CCSAPQ6IQ19 270 aaPredicted RBP19.28■□□□□ 0.68
COL16A1-216ENST00000529928 MFSD5Q6N075 450 aa19.28■□□□□ 0.68
COL16A1-216ENST00000529928 ZSCAN25Q6NSZ9 544 aa19.28■□□□□ 0.68
COL16A1-216ENST00000529928 ZNF467Q7Z7K2 595 aaPredicted RBP19.28■□□□□ 0.68
COL16A1-216ENST00000529928 PCSK9Q8NBP7 692 aaKnown RBP19.28■□□□□ 0.68
COL16A1-216ENST00000529928 ZHX1Q9UKY1 873 aaPredicted RBP19.28■□□□□ 0.68
COL16A1-216ENST00000529928 TBX21Q9UL17 535 aa19.28■□□□□ 0.68
COL16A1-216ENST00000529928 TJAP1Q5JTD0 557 aa19.27■□□□□ 0.68
COL16A1-216ENST00000529928 PRPF38AQ8NAV1 312 aaKnown RBP19.27■□□□□ 0.68
COL16A1-216ENST00000529928 TIFAQ96CG3 184 aa19.27■□□□□ 0.68
COL16A1-216ENST00000529928 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.27■□□□□ 0.688e-7■■■■■ 32.7
COL16A1-216ENST00000529928 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.27■□□□□ 0.68
COL16A1-216ENST00000529928 SPC25Q9HBM1 224 aa19.27■□□□□ 0.68
COL16A1-216ENST00000529928 SPTBN5Q9NRC6 3674 aaKnown RBP19.27■□□□□ 0.68
COL16A1-216ENST00000529928 ATP2A1O14983 1001 aa19.26■□□□□ 0.67
COL16A1-216ENST00000529928 C6orf222P0C671 652 aaPredicted RBP19.26■□□□□ 0.67
COL16A1-216ENST00000529928 PPIGQ13427 754 aaKnown RBP eCLIP19.26■□□□□ 0.676e-9■■■■□ 22.3
COL16A1-216ENST00000529928 ACVR2BQ13705 512 aa19.26■□□□□ 0.67
COL16A1-216ENST00000529928 NUP88Q99567 741 aaPredicted RBP19.26■□□□□ 0.67
COL16A1-216ENST00000529928 NYAP2Q9P242 653 aa19.26■□□□□ 0.67
COL16A1-216ENST00000529928 RIPK3Q9Y572 518 aa19.26■□□□□ 0.67
COL16A1-216ENST00000529928 GREB1LQ9C091 1923 aaPredicted RBP19.25■□□□□ 0.67
COL16A1-216ENST00000529928 MYADML2A6NDP7 307 aa19.25■□□□□ 0.67
COL16A1-216ENST00000529928 F5H6K3 240 aa19.25■□□□□ 0.67
COL16A1-216ENST00000529928 CHGBP05060 677 aa19.25■□□□□ 0.67
COL16A1-216ENST00000529928 ASGR1P07306 291 aa19.25■□□□□ 0.67
COL16A1-216ENST00000529928 CDK7P50613 346 aa19.25■□□□□ 0.67
COL16A1-216ENST00000529928 KLRC3Q07444 240 aa19.25■□□□□ 0.67
COL16A1-216ENST00000529928 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.25■□□□□ 0.67
COL16A1-216ENST00000529928 SIRT2Q8IXJ6 389 aa19.25■□□□□ 0.67
COL16A1-216ENST00000529928 USP38Q8NB14 1042 aa19.25■□□□□ 0.67
COL16A1-216ENST00000529928 PUS7LQ9H0K6 701 aaKnown RBP19.25■□□□□ 0.67
COL16A1-216ENST00000529928 ABHD16BQ9H3Z7 469 aa19.25■□□□□ 0.67
COL16A1-216ENST00000529928 CTDP1Q9Y5B0 961 aaPredicted RBP19.25■□□□□ 0.67
COL16A1-216ENST00000529928 MYH7P12883 1935 aa19.25■□□□□ 0.67
COL16A1-216ENST00000529928 A0A0U1RQG5 324 aaPredicted RBP19.24■□□□□ 0.67
COL16A1-216ENST00000529928 ZBED4O75132 1171 aa19.24■□□□□ 0.67
COL16A1-216ENST00000529928 NDUFB10O96000 172 aa19.24■□□□□ 0.67
COL16A1-216ENST00000529928 RASA1P20936 1047 aa19.24■□□□□ 0.67
COL16A1-216ENST00000529928 SBK1Q52WX2 424 aa19.24■□□□□ 0.67
COL16A1-216ENST00000529928 CPXCR1Q8N123 301 aa19.24■□□□□ 0.67
COL16A1-216ENST00000529928 TMEM199Q8N511 208 aa19.24■□□□□ 0.67
COL16A1-216ENST00000529928 VTI1AQ96AJ9 217 aa19.24■□□□□ 0.67
COL16A1-216ENST00000529928 GAS2L1Q99501 681 aaPredicted RBP19.24■□□□□ 0.67
COL16A1-216ENST00000529928 UPF3AQ9H1J1 476 aaKnown RBP19.24■□□□□ 0.67
COL16A1-216ENST00000529928 MKNK2Q9HBH9 465 aa19.24■□□□□ 0.67
COL16A1-216ENST00000529928 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.24■□□□□ 0.67
COL16A1-216ENST00000529928 DDX19BQ9UMR2 479 aa19.24■□□□□ 0.67
COL16A1-216ENST00000529928 SLC4A3P48751 1232 aa19.23■□□□□ 0.67
COL16A1-216ENST00000529928 GJA9P57773 515 aa19.23■□□□□ 0.67
COL16A1-216ENST00000529928 CCDC144BQ3MJ40 725 aa19.23■□□□□ 0.67
COL16A1-216ENST00000529928 TMEM240Q5SV17 173 aa19.23■□□□□ 0.67
COL16A1-216ENST00000529928 PSRC1Q6PGN9 363 aaPredicted RBP19.23■□□□□ 0.67
COL16A1-216ENST00000529928 CCDC129Q6ZRS4 1044 aa19.23■□□□□ 0.67
COL16A1-216ENST00000529928 C16orf59Q7L2K0 433 aa19.23■□□□□ 0.67
COL16A1-216ENST00000529928 ANKRD35Q8N283 1001 aa19.23■□□□□ 0.67
COL16A1-216ENST00000529928 PBX4Q9BYU1 374 aa19.23■□□□□ 0.67
COL16A1-216ENST00000529928 ZBTB40Q9NUA8 1239 aa19.23■□□□□ 0.67
COL16A1-216ENST00000529928 FBXO40Q9UH90 709 aa19.23■□□□□ 0.67
COL16A1-216ENST00000529928 ARVCFO00192 962 aa19.22■□□□□ 0.67
COL16A1-216ENST00000529928 TNFRSF10AO00220 468 aa19.22■□□□□ 0.67
COL16A1-216ENST00000529928 TLR3O15455 904 aaKnown RBP19.22■□□□□ 0.67
COL16A1-216ENST00000529928 ADCY6O43306 1168 aa19.22■□□□□ 0.67
COL16A1-216ENST00000529928 CSF2RAP15509 400 aa19.22■□□□□ 0.67
COL16A1-216ENST00000529928 GNASQ5JWF2 1037 aa19.22■□□□□ 0.67
COL16A1-216ENST00000529928 RASIP1Q5U651 963 aa19.22■□□□□ 0.67
COL16A1-216ENST00000529928 GIMAP6Q6P9H5 292 aa19.22■□□□□ 0.67
COL16A1-216ENST00000529928 CHST13Q8NET6 341 aa19.22■□□□□ 0.67
COL16A1-216ENST00000529928 SLC38A10Q9HBR0 1119 aa19.22■□□□□ 0.67
COL16A1-216ENST00000529928 OAZ1P54368 228 aa19.21■□□□□ 0.67
COL16A1-216ENST00000529928 IRX5P78411 483 aaPredicted RBP19.21■□□□□ 0.67
COL16A1-216ENST00000529928 AKNAD1Q5T1N1 836 aa19.21■□□□□ 0.67
COL16A1-216ENST00000529928 ARMCX2Q7L311 632 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms