RNA–Protein interactions for RNA: ENST00000529347.1

CDKL1-206, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 2

Gene CDKL1, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-206ENST00000529347 ZNF543Q08ER8 600 aa16.5■□□□□ 0.23
CDKL1-206ENST00000529347 LBX2Q6XYB7 198 aa16.5■□□□□ 0.23
CDKL1-206ENST00000529347 CATIPQ7Z7H3 387 aa16.5■□□□□ 0.23
CDKL1-206ENST00000529347 FAM160B2Q86V87 743 aa16.5■□□□□ 0.23
CDKL1-206ENST00000529347 PRPF38AQ8NAV1 312 aaKnown RBP16.5■□□□□ 0.23
CDKL1-206ENST00000529347 NUP133Q8WUM0 1156 aa16.5■□□□□ 0.23
CDKL1-206ENST00000529347 TRIM47Q96LD4 638 aa16.5■□□□□ 0.23
CDKL1-206ENST00000529347 MYL10Q9BUA6 226 aa16.5■□□□□ 0.23
CDKL1-206ENST00000529347 CPVLQ9H3G5 476 aa16.5■□□□□ 0.23
CDKL1-206ENST00000529347 EFCC1Q9HA90 598 aa16.5■□□□□ 0.23
CDKL1-206ENST00000529347 NAP1L2Q9ULW6 460 aaPredicted RBP16.5■□□□□ 0.23
CDKL1-206ENST00000529347 ZBED4O75132 1171 aa16.49■□□□□ 0.23
CDKL1-206ENST00000529347 PARP1P09874 1014 aaKnown RBP16.49■□□□□ 0.23
CDKL1-206ENST00000529347 FCGRTP55899 365 aa16.49■□□□□ 0.23
CDKL1-206ENST00000529347 EXOSC10Q01780 885 aaKnown RBP16.49■□□□□ 0.23
CDKL1-206ENST00000529347 TMEM132BQ14DG7 1078 aa16.49■□□□□ 0.23
CDKL1-206ENST00000529347 COL13A1Q5TAT6 717 aaPredicted RBP16.49■□□□□ 0.23
CDKL1-206ENST00000529347 SYDE2Q5VT97 1194 aa16.49■□□□□ 0.23
CDKL1-206ENST00000529347 CCDC174Q6PII3 467 aa16.49■□□□□ 0.23
CDKL1-206ENST00000529347 CTU1Q7Z7A3 348 aaKnown RBP16.49■□□□□ 0.23
CDKL1-206ENST00000529347 CPXCR1Q8N123 301 aa16.49■□□□□ 0.23
CDKL1-206ENST00000529347 MB21D1Q8N884 522 aa16.49■□□□□ 0.23
CDKL1-206ENST00000529347 SPATC1LQ9H0A9 340 aa16.49■□□□□ 0.23
CDKL1-206ENST00000529347 PORCNQ9H237 461 aa16.49■□□□□ 0.23
CDKL1-206ENST00000529347 TNPO2O14787 897 aaKnown RBP16.48■□□□□ 0.23
CDKL1-206ENST00000529347 DHX16O60231 1041 aaKnown RBP16.48■□□□□ 0.23
CDKL1-206ENST00000529347 SNHG28P0DPA3 235 aa16.48■□□□□ 0.23
CDKL1-206ENST00000529347 RXRAP19793 462 aa16.48■□□□□ 0.23
CDKL1-206ENST00000529347 RPS6KB1P23443 525 aa16.48■□□□□ 0.23
CDKL1-206ENST00000529347 CCNA1P78396 465 aa16.48■□□□□ 0.23
CDKL1-206ENST00000529347 Q6ZUG5 572 aa16.48■□□□□ 0.23
CDKL1-206ENST00000529347 OTOP1Q7RTM1 612 aa16.48■□□□□ 0.23
CDKL1-206ENST00000529347 CCDC144CPQ8IYA2 1237 aa16.48■□□□□ 0.23
CDKL1-206ENST00000529347 ZNF654Q8IZM8 581 aa16.48■□□□□ 0.23
CDKL1-206ENST00000529347 UPF3BQ9BZI7 483 aaKnown RBP16.48■□□□□ 0.23
CDKL1-206ENST00000529347 UBA5Q9GZZ9 404 aa16.48■□□□□ 0.23
CDKL1-206ENST00000529347 RAVER2Q9HCJ3 691 aaKnown RBP16.48■□□□□ 0.23
CDKL1-206ENST00000529347 PRR12Q9ULL5 1215 aa16.48■□□□□ 0.23
CDKL1-206ENST00000529347 WDR19Q8NEZ3 1342 aa16.47■□□□□ 0.23
CDKL1-206ENST00000529347 ARHGEF6Q15052 776 aa16.47■□□□□ 0.23
CDKL1-206ENST00000529347 ASPRV1Q53RT3 343 aa16.47■□□□□ 0.23
CDKL1-206ENST00000529347 GPATCH4Q5T3I0 446 aaKnown RBP16.47■□□□□ 0.23
CDKL1-206ENST00000529347 NCAPG2Q86XI2 1143 aa16.47■□□□□ 0.23
CDKL1-206ENST00000529347 TMTC2Q8N394 836 aa16.47■□□□□ 0.23
CDKL1-206ENST00000529347 STAG2Q8N3U4 1231 aa16.47■□□□□ 0.23
CDKL1-206ENST00000529347 MTA3Q9BTC8 594 aa16.47■□□□□ 0.23
CDKL1-206ENST00000529347 MOV10L1Q9BXT6 1211 aaKnown RBP16.47■□□□□ 0.23
CDKL1-206ENST00000529347 ADAMTS5Q9UNA0 930 aa16.47■□□□□ 0.23
CDKL1-206ENST00000529347 SLC12A7Q9Y666 1083 aa16.47■□□□□ 0.23
CDKL1-206ENST00000529347 CYP46A1Q9Y6A2 500 aa16.47■□□□□ 0.23
CDKL1-206ENST00000529347 PLA2G6O60733 806 aa16.46■□□□□ 0.23
CDKL1-206ENST00000529347 STAT3P40763 770 aa16.46■□□□□ 0.23
CDKL1-206ENST00000529347 LIFRP42702 1097 aa16.46■□□□□ 0.23
CDKL1-206ENST00000529347 GRM4Q14833 912 aa16.46■□□□□ 0.23
CDKL1-206ENST00000529347 SNRNP48Q6IEG0 339 aaKnown RBP16.46■□□□□ 0.23
CDKL1-206ENST00000529347 SYNE3Q6ZMZ3 975 aa16.46■□□□□ 0.23
CDKL1-206ENST00000529347 RUFY3Q7L099 469 aa16.46■□□□□ 0.23
CDKL1-206ENST00000529347 MICU3Q86XE3 530 aa16.46■□□□□ 0.23
CDKL1-206ENST00000529347 REPS2Q8NFH8 660 aa16.46■□□□□ 0.23
CDKL1-206ENST00000529347 COA7Q96BR5 231 aa16.46■□□□□ 0.23
CDKL1-206ENST00000529347 SLC38A10Q9HBR0 1119 aa16.46■□□□□ 0.23
CDKL1-206ENST00000529347 VAT1LQ9HCJ6 419 aa16.46■□□□□ 0.23
CDKL1-206ENST00000529347 MAD2L2Q9UI95 211 aa16.46■□□□□ 0.23
CDKL1-206ENST00000529347 PLXNA1Q9UIW2 1896 aa16.46■□□□□ 0.22
CDKL1-206ENST00000529347 KLF18A0A0U1RQI7 1052 aa16.45■□□□□ 0.22
CDKL1-206ENST00000529347 KLRF2D3W0D1 207 aa16.45■□□□□ 0.22
CDKL1-206ENST00000529347 DDAH1O94760 285 aa16.45■□□□□ 0.22
CDKL1-206ENST00000529347 TAL1P17542 331 aaPredicted RBP16.45■□□□□ 0.22
CDKL1-206ENST00000529347 ERCC3P19447 782 aa16.45■□□□□ 0.22
CDKL1-206ENST00000529347 MAPK4P31152 587 aa16.45■□□□□ 0.22
CDKL1-206ENST00000529347 APOBRQ0VD83 1088 aa16.45■□□□□ 0.22
CDKL1-206ENST00000529347 TROAPQ12815 778 aa16.45■□□□□ 0.22
CDKL1-206ENST00000529347 BTNL9Q6UXG8 535 aa16.45■□□□□ 0.22
CDKL1-206ENST00000529347 GPR142Q7Z601 462 aa16.45■□□□□ 0.22
CDKL1-206ENST00000529347 CTCFLQ8NI51 663 aaPredicted RBP16.45■□□□□ 0.22
CDKL1-206ENST00000529347 BRF1Q92994 677 aa16.45■□□□□ 0.22
CDKL1-206ENST00000529347 ZSWIM6Q9HCJ5 1215 aa16.45■□□□□ 0.22
CDKL1-206ENST00000529347 HOMER2Q9NSB8 354 aa16.45■□□□□ 0.22
CDKL1-206ENST00000529347 ZNF214Q9UL59 606 aaPredicted RBP16.45■□□□□ 0.22
CDKL1-206ENST00000529347 GABRQQ9UN88 632 aa16.45■□□□□ 0.22
CDKL1-206ENST00000529347 CENPFP49454 3210 aa16.45■□□□□ 0.22
CDKL1-206ENST00000529347 HOXD10P28358 340 aa16.44■□□□□ 0.22
CDKL1-206ENST00000529347 ANAPC15P60006 121 aa16.44■□□□□ 0.22
CDKL1-206ENST00000529347 PRKCZQ05513 592 aa16.44■□□□□ 0.22
CDKL1-206ENST00000529347 PLEKHH3Q7Z736 793 aa16.44■□□□□ 0.22
CDKL1-206ENST00000529347 SGMS1Q86VZ5 419 aa16.44■□□□□ 0.22
CDKL1-206ENST00000529347 ADGRF4Q8IZF3 695 aa16.44■□□□□ 0.22
CDKL1-206ENST00000529347 PIBF1Q8WXW3 757 aa16.44■□□□□ 0.22
CDKL1-206ENST00000529347 AGBL1Q96MI9 1066 aa16.44■□□□□ 0.22
CDKL1-206ENST00000529347 TEX13BQ9BXU2 312 aa16.44■□□□□ 0.22
CDKL1-206ENST00000529347 TM6SF1Q9BZW5 370 aa16.44■□□□□ 0.22
CDKL1-206ENST00000529347 MCOLN1Q9GZU1 580 aa16.44■□□□□ 0.22
CDKL1-206ENST00000529347 UPF2Q9HAU5 1272 aaKnown RBP16.44■□□□□ 0.22
CDKL1-206ENST00000529347 PDRG1Q9NUG6 133 aa16.44■□□□□ 0.22
CDKL1-206ENST00000529347 SRRDQ9UH36 339 aa16.44■□□□□ 0.22
CDKL1-206ENST00000529347 BRPF3Q9ULD4 1205 aa16.44■□□□□ 0.22
CDKL1-206ENST00000529347 IVNS1ABPQ9Y6Y0 642 aa16.44■□□□□ 0.22
CDKL1-206ENST00000529347 HTTP42858 3142 aa16.44■□□□□ 0.22
CDKL1-206ENST00000529347 PALM3A6NDB9 673 aaPredicted RBP16.43■□□□□ 0.22
CDKL1-206ENST00000529347 FDX1P10109 184 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms