RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 ZGPATQ8N5A5 531 aaKnown RBP10.35□□□□□ -0.75
SSBP3-212ENST00000528930 SPATA5Q8NB90 893 aa10.35□□□□□ -0.75
SSBP3-212ENST00000528930 ZNF384Q8TF68 577 aa10.35□□□□□ -0.75
SSBP3-212ENST00000528930 MFSD14AQ96MC6 490 aa10.35□□□□□ -0.75
SSBP3-212ENST00000528930 DBNDD2Q9BQY9 259 aa10.35□□□□□ -0.75
SSBP3-212ENST00000528930 SLC28A3Q9HAS3 691 aa10.35□□□□□ -0.75
SSBP3-212ENST00000528930 MSRAQ9UJ68 235 aa10.35□□□□□ -0.75
SSBP3-212ENST00000528930 EXOC6BQ9Y2D4 811 aa10.35□□□□□ -0.75
SSBP3-212ENST00000528930 YBX2Q9Y2T7 364 aaKnown RBP10.35□□□□□ -0.75
SSBP3-212ENST00000528930 ATRNL1Q5VV63 1379 aa10.35□□□□□ -0.75
SSBP3-212ENST00000528930 GVINP1Q7Z2Y8 2422 aa10.35□□□□□ -0.75
SSBP3-212ENST00000528930 NCOR2Q9Y618 2525 aa10.35□□□□□ -0.75
SSBP3-212ENST00000528930 MAP1BP46821 2468 aaKnown RBP10.34□□□□□ -0.75
SSBP3-212ENST00000528930 MED19A0JLT2 244 aaPredicted RBP10.34□□□□□ -0.75
SSBP3-212ENST00000528930 ID4P47928 161 aa10.34□□□□□ -0.75
SSBP3-212ENST00000528930 TMEM240Q5SV17 173 aa10.34□□□□□ -0.75
SSBP3-212ENST00000528930 TREML2Q5T2D2 321 aa10.34□□□□□ -0.75
SSBP3-212ENST00000528930 GORABQ5T7V8 394 aa10.34□□□□□ -0.75
SSBP3-212ENST00000528930 CDC42EP5Q6NZY7 148 aa10.34□□□□□ -0.75
SSBP3-212ENST00000528930 TBC1D9Q6ZT07 1266 aa10.34□□□□□ -0.75
SSBP3-212ENST00000528930 C16orf59Q7L2K0 433 aa10.34□□□□□ -0.75
SSBP3-212ENST00000528930 ZNF512BQ96KM6 892 aaPredicted RBP10.34□□□□□ -0.75
SSBP3-212ENST00000528930 YTHDC1Q96MU7 727 aaKnown RBP10.34□□□□□ -0.75
SSBP3-212ENST00000528930 APBA2Q99767 749 aa10.34□□□□□ -0.75
SSBP3-212ENST00000528930 TMUB1Q9BVT8 246 aa10.34□□□□□ -0.75
SSBP3-212ENST00000528930 CCDC8Q9H0W5 538 aaPredicted RBP10.34□□□□□ -0.75
SSBP3-212ENST00000528930 CHMP4BQ9H444 224 aaKnown RBP10.34□□□□□ -0.75
SSBP3-212ENST00000528930 TLR7Q9NYK1 1049 aaKnown RBP10.34□□□□□ -0.75
SSBP3-212ENST00000528930 ABCF2Q9UG63 623 aa10.34□□□□□ -0.75
SSBP3-212ENST00000528930 DBNLQ9UJU6 430 aaKnown RBP10.34□□□□□ -0.75
SSBP3-212ENST00000528930 PCDHB3Q9Y5E6 796 aa10.34□□□□□ -0.75
SSBP3-212ENST00000528930 ZHX2Q9Y6X8 837 aa10.34□□□□□ -0.75
SSBP3-212ENST00000528930 CFAP47Q6ZTR5 3102 aa10.34□□□□□ -0.75
SSBP3-212ENST00000528930 GAKO14976 1311 aa10.33□□□□□ -0.76
SSBP3-212ENST00000528930 ZNF236Q9UL36 1845 aa10.33□□□□□ -0.76
SSBP3-212ENST00000528930 MYH2Q9UKX2 1941 aa10.33□□□□□ -0.76
SSBP3-212ENST00000528930 SMCHD1A6NHR9 2005 aa10.33□□□□□ -0.76
SSBP3-212ENST00000528930 UQCRFS1P1P0C7P4 283 aa10.33□□□□□ -0.76
SSBP3-212ENST00000528930 PTPRAP18433 802 aa10.33□□□□□ -0.76
SSBP3-212ENST00000528930 COL9A2Q14055 689 aaPredicted RBP10.33□□□□□ -0.76
SSBP3-212ENST00000528930 CCDC158Q5M9N0 1113 aa10.33□□□□□ -0.76
SSBP3-212ENST00000528930 GJC2Q5T442 439 aaPredicted RBP10.33□□□□□ -0.76
SSBP3-212ENST00000528930 SPTY2D1Q68D10 685 aaPredicted RBP10.33□□□□□ -0.76
SSBP3-212ENST00000528930 SCYL3Q8IZE3 742 aa10.33□□□□□ -0.76
SSBP3-212ENST00000528930 RHPN1Q8TCX5 695 aa10.33□□□□□ -0.76
SSBP3-212ENST00000528930 PRRX2Q99811 253 aa10.33□□□□□ -0.76
SSBP3-212ENST00000528930 MYO15AQ9UKN7 3530 aa10.33□□□□□ -0.76
SSBP3-212ENST00000528930 KBTBD13C9JR72 458 aa10.32□□□□□ -0.76
SSBP3-212ENST00000528930 RGS2P41220 211 aa10.32□□□□□ -0.76
SSBP3-212ENST00000528930 MECOMQ03112 1051 aa10.32□□□□□ -0.76
SSBP3-212ENST00000528930 NFIAQ12857 509 aa10.32□□□□□ -0.76
SSBP3-212ENST00000528930 TTC39AQ5SRH9 613 aa10.32□□□□□ -0.76
SSBP3-212ENST00000528930 MORN1Q5T089 497 aa10.32□□□□□ -0.76
SSBP3-212ENST00000528930 ERICH6Q7L0X2 663 aa10.32□□□□□ -0.76
SSBP3-212ENST00000528930 ERC1Q8IUD2 1116 aa10.32□□□□□ -0.76
SSBP3-212ENST00000528930 PROCA1Q8NCQ7 364 aaPredicted RBP10.32□□□□□ -0.76
SSBP3-212ENST00000528930 ARRDC4Q8NCT1 418 aa10.32□□□□□ -0.76
SSBP3-212ENST00000528930 FAM151AQ8WW52 585 aa10.32□□□□□ -0.76
SSBP3-212ENST00000528930 NSUN4Q96CB9 384 aaKnown RBP10.32□□□□□ -0.76
SSBP3-212ENST00000528930 CNTNAP3BQ96NU0 1288 aa10.32□□□□□ -0.76
SSBP3-212ENST00000528930 CNTNAP3Q9BZ76 1288 aa10.32□□□□□ -0.76
SSBP3-212ENST00000528930 ALG13Q9NP73 1137 aaKnown RBP10.32□□□□□ -0.76
SSBP3-212ENST00000528930 SNRKQ9NRH2 765 aa10.32□□□□□ -0.76
SSBP3-212ENST00000528930 USP40Q9NVE5 1235 aa10.32□□□□□ -0.76
SSBP3-212ENST00000528930 TMOD2Q9NZR1 351 aa10.32□□□□□ -0.76
SSBP3-212ENST00000528930 GPR75-ASB3A0A0A6YYF3 556 aa10.31□□□□□ -0.76
SSBP3-212ENST00000528930 PHF20L1A8MW92 1017 aa10.31□□□□□ -0.76
SSBP3-212ENST00000528930 PROB1E7EW31 1015 aa10.31□□□□□ -0.76
SSBP3-212ENST00000528930 HMMRO75330 724 aa10.31□□□□□ -0.76
SSBP3-212ENST00000528930 CYP2E1P05181 493 aaPredicted RBP10.31□□□□□ -0.76
SSBP3-212ENST00000528930 RRP1P56182 461 aaKnown RBP10.31□□□□□ -0.76
SSBP3-212ENST00000528930 HSP90AB4PQ58FF6 505 aa10.31□□□□□ -0.76
SSBP3-212ENST00000528930 DZIP1Q86YF9 867 aaKnown RBP10.31□□□□□ -0.76
SSBP3-212ENST00000528930 IDI2Q9BXS1 227 aa10.31□□□□□ -0.76
SSBP3-212ENST00000528930 IL1RAPL2Q9NP60 686 aa10.31□□□□□ -0.76
SSBP3-212ENST00000528930 MROH7-TTC4A0A0A0MT08 1334 aa10.31□□□□□ -0.76
SSBP3-212ENST00000528930 RFX7Q2KHR2 1363 aa10.3□□□□□ -0.76
SSBP3-212ENST00000528930 MYO5AQ9Y4I1 1855 aaKnown RBP10.3□□□□□ -0.76
SSBP3-212ENST00000528930 RAB11FIP3O75154 756 aa10.3□□□□□ -0.76
SSBP3-212ENST00000528930 IGHA2P01877 340 aa10.3□□□□□ -0.76
SSBP3-212ENST00000528930 BTDP43251 543 aa10.3□□□□□ -0.76
SSBP3-212ENST00000528930 ZAP70P43403 619 aa10.3□□□□□ -0.76
SSBP3-212ENST00000528930 RHBDL3P58872 404 aa10.3□□□□□ -0.76
SSBP3-212ENST00000528930 PPIGQ13427 754 aaKnown RBP eCLIP10.3□□□□□ -0.76
SSBP3-212ENST00000528930 PPP2R2DQ66LE6 453 aa10.3□□□□□ -0.76
SSBP3-212ENST00000528930 CCDC174Q6PII3 467 aa10.3□□□□□ -0.76
SSBP3-212ENST00000528930 AACSQ86V21 672 aa10.3□□□□□ -0.76
SSBP3-212ENST00000528930 ZFPM1Q8IX07 1006 aa10.3□□□□□ -0.76
SSBP3-212ENST00000528930 KIF1BPQ96EK5 621 aa10.3□□□□□ -0.76
SSBP3-212ENST00000528930 PICK1Q9NRD5 415 aa10.3□□□□□ -0.76
SSBP3-212ENST00000528930 FAM86C1Q9NVL1 165 aa10.3□□□□□ -0.76
SSBP3-212ENST00000528930 FLRT1Q9NZU1 646 aa10.3□□□□□ -0.76
SSBP3-212ENST00000528930 RAI14Q9P0K7 980 aa10.3□□□□□ -0.76
SSBP3-212ENST00000528930 FASNP49327 2511 aaKnown RBP10.3□□□□□ -0.76
SSBP3-212ENST00000528930 TRIOO75962 3097 aa10.3□□□□□ -0.76
SSBP3-212ENST00000528930 COL11A1P12107 1806 aaPredicted RBP10.29□□□□□ -0.76
SSBP3-212ENST00000528930 TRIM75PA6NK02 468 aa10.29□□□□□ -0.76
SSBP3-212ENST00000528930 MAPK4P31152 587 aa10.29□□□□□ -0.76
SSBP3-212ENST00000528930 SSTR3P32745 418 aaPredicted RBP10.29□□□□□ -0.76
SSBP3-212ENST00000528930 ADCYAP1R1P41586 468 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms