RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 ANO10Q9NW15 660 aa13.52□□□□□ -0.25
USF1-208ENST00000528768 BIN2Q9UBW5 565 aaPredicted RBP13.52□□□□□ -0.25
USF1-208ENST00000528768 USP25Q9UHP3 1055 aa13.52□□□□□ -0.25
USF1-208ENST00000528768 ZKSCAN5Q9Y2L8 839 aa13.52□□□□□ -0.25
USF1-208ENST00000528768 MYH15Q9Y2K3 1946 aa13.51□□□□□ -0.25
USF1-208ENST00000528768 MYO5AQ9Y4I1 1855 aaKnown RBP13.51□□□□□ -0.25
USF1-208ENST00000528768 BTBD19C9JJ37 291 aa13.51□□□□□ -0.25
USF1-208ENST00000528768 GOLGA6L19H0YKK7 550 aa13.51□□□□□ -0.25
USF1-208ENST00000528768 PPP6R2O75170 966 aa13.51□□□□□ -0.25
USF1-208ENST00000528768 POLR3DP05423 398 aaPredicted RBP13.51□□□□□ -0.25
USF1-208ENST00000528768 MECOMQ03112 1051 aa13.51□□□□□ -0.25
USF1-208ENST00000528768 PPIL2Q13356 520 aa13.51□□□□□ -0.25
USF1-208ENST00000528768 SBK1Q52WX2 424 aa13.51□□□□□ -0.25
USF1-208ENST00000528768 SLF2Q8IX21 1173 aa13.51□□□□□ -0.25
USF1-208ENST00000528768 CKAP2LQ8IYA6 745 aa13.51□□□□□ -0.25
USF1-208ENST00000528768 ZNF654Q8IZM8 581 aa13.51□□□□□ -0.25
USF1-208ENST00000528768 TEPSINQ96N21 525 aa13.51□□□□□ -0.25
USF1-208ENST00000528768 ZSCAN10Q96SZ4 725 aaPredicted RBP13.51□□□□□ -0.25
USF1-208ENST00000528768 SDF4Q9BRK5 362 aa13.51□□□□□ -0.25
USF1-208ENST00000528768 PCDHA7Q9UN72 937 aa13.51□□□□□ -0.25
USF1-208ENST00000528768 CEP131Q9UPN4 1083 aa13.51□□□□□ -0.25
USF1-208ENST00000528768 PCDHAC2Q9Y5I4 1007 aa13.51□□□□□ -0.25
USF1-208ENST00000528768 MRVI1Q9Y6F6 885 aa13.51□□□□□ -0.25
USF1-208ENST00000528768 A0A1B0GUL6 1792 aa13.5□□□□□ -0.25
USF1-208ENST00000528768 MYPNQ86TC9 1320 aa13.5□□□□□ -0.25
USF1-208ENST00000528768 SOX1O00570 391 aaPredicted RBP13.5□□□□□ -0.25
USF1-208ENST00000528768 ORC4O43929 436 aa13.5□□□□□ -0.25
USF1-208ENST00000528768 DDAH1O94760 285 aa13.5□□□□□ -0.25
USF1-208ENST00000528768 SGPL1O95470 568 aa13.5□□□□□ -0.25
USF1-208ENST00000528768 LDHBP07195 334 aaKnown RBP13.5□□□□□ -0.25
USF1-208ENST00000528768 OSBPP22059 807 aa13.5□□□□□ -0.25
USF1-208ENST00000528768 CDC27P30260 824 aa13.5□□□□□ -0.25
USF1-208ENST00000528768 PLCB2Q00722 1185 aa13.5□□□□□ -0.25
USF1-208ENST00000528768 SLC39A14Q15043 492 aa13.5□□□□□ -0.25
USF1-208ENST00000528768 NTRK3Q16288 839 aa13.5□□□□□ -0.25
USF1-208ENST00000528768 ANO6Q4KMQ2 910 aa13.5□□□□□ -0.25
USF1-208ENST00000528768 IFIT1BQ5T764 474 aaKnown RBP13.5□□□□□ -0.25
USF1-208ENST00000528768 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.5□□□□□ -0.25
USF1-208ENST00000528768 ANKRD23Q86SG2 305 aa13.5□□□□□ -0.25
USF1-208ENST00000528768 DEFB123Q8N688 67 aa13.5□□□□□ -0.25
USF1-208ENST00000528768 FANCBQ8NB91 859 aa13.5□□□□□ -0.25
USF1-208ENST00000528768 NUP133Q8WUM0 1156 aa13.5□□□□□ -0.25
USF1-208ENST00000528768 SDR42E1Q8WUS8 393 aa13.5□□□□□ -0.25
USF1-208ENST00000528768 CNKSR2Q8WXI2 1034 aa13.5□□□□□ -0.25
USF1-208ENST00000528768 LRCH3Q96II8 777 aa13.5□□□□□ -0.25
USF1-208ENST00000528768 RNF26Q9BY78 433 aaPredicted RBP13.5□□□□□ -0.25
USF1-208ENST00000528768 ZNF287Q9HBT7 754 aa13.5□□□□□ -0.25
USF1-208ENST00000528768 BRMS1Q9HCU9 246 aa13.5□□□□□ -0.25
USF1-208ENST00000528768 HOOK1Q9UJC3 728 aaKnown RBP13.5□□□□□ -0.25
USF1-208ENST00000528768 TNKSO95271 1327 aa13.49□□□□□ -0.25
USF1-208ENST00000528768 FAM205AQ6ZU69 1335 aa13.49□□□□□ -0.25
USF1-208ENST00000528768 IRS2Q9Y4H2 1338 aa13.49□□□□□ -0.25
USF1-208ENST00000528768 ZNF500O60304 480 aaPredicted RBP13.49□□□□□ -0.25
USF1-208ENST00000528768 RANBP6O60518 1105 aaKnown RBP13.49□□□□□ -0.25
USF1-208ENST00000528768 FGRP09769 529 aa13.49□□□□□ -0.25
USF1-208ENST00000528768 CMA1P23946 247 aa13.49□□□□□ -0.25
USF1-208ENST00000528768 U2AF2P26368 475 aaKnown RBP eCLIP13.49□□□□□ -0.25
USF1-208ENST00000528768 ZNF165P49910 485 aa13.49□□□□□ -0.25
USF1-208ENST00000528768 DYNLL1P63167 89 aaKnown RBP13.49□□□□□ -0.25
USF1-208ENST00000528768 TPM4P67936 248 aa13.49□□□□□ -0.25
USF1-208ENST00000528768 PPATQ06203 517 aa13.49□□□□□ -0.25
USF1-208ENST00000528768 CCDC144CPQ8IYA2 1237 aa13.49□□□□□ -0.25
USF1-208ENST00000528768 CEP57L1Q8IYX8 460 aa13.49□□□□□ -0.25
USF1-208ENST00000528768 CRACR2BQ8N4Y2 399 aaPredicted RBP13.49□□□□□ -0.25
USF1-208ENST00000528768 PHKBQ93100 1093 aa13.49□□□□□ -0.25
USF1-208ENST00000528768 CCDC34Q96HJ3 373 aa13.49□□□□□ -0.25
USF1-208ENST00000528768 FOXP1Q9H334 677 aaPredicted RBP13.49□□□□□ -0.25
USF1-208ENST00000528768 LAMA3Q16787 3333 aa13.49□□□□□ -0.25
USF1-208ENST00000528768 IRF6O14896 467 aa13.48□□□□□ -0.25
USF1-208ENST00000528768 CUTAO60888 179 aa13.48□□□□□ -0.25
USF1-208ENST00000528768 PPFIA3O75145 1194 aa13.48□□□□□ -0.25
USF1-208ENST00000528768 RXRAP19793 462 aa13.48□□□□□ -0.25
USF1-208ENST00000528768 FCGRTP55899 365 aa13.48□□□□□ -0.25
USF1-208ENST00000528768 LRIT3Q3SXY7 679 aa13.48□□□□□ -0.25
USF1-208ENST00000528768 RILPL1Q5EBL4 403 aa13.48□□□□□ -0.25
USF1-208ENST00000528768 DCAF15Q66K64 600 aa13.48□□□□□ -0.25
USF1-208ENST00000528768 CTR9Q6PD62 1173 aa13.48□□□□□ -0.25
USF1-208ENST00000528768 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.48□□□□□ -0.25
USF1-208ENST00000528768 ADGRA1Q86SQ6 560 aa13.48□□□□□ -0.25
USF1-208ENST00000528768 ENGASEQ8NFI3 743 aa13.48□□□□□ -0.25
USF1-208ENST00000528768 TDRD7Q8NHU6 1098 aaKnown RBP13.48□□□□□ -0.25
USF1-208ENST00000528768 CTCFLQ8NI51 663 aaPredicted RBP13.48□□□□□ -0.25
USF1-208ENST00000528768 TIGD1Q96MW7 591 aa13.48□□□□□ -0.25
USF1-208ENST00000528768 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.48□□□□□ -0.25
USF1-208ENST00000528768 TDRD3Q9H7E2 651 aaKnown RBP13.48□□□□□ -0.25
USF1-208ENST00000528768 CBX8Q9HC52 389 aa13.48□□□□□ -0.25
USF1-208ENST00000528768 FAM217BQ9NTX9 383 aaPredicted RBP13.48□□□□□ -0.25
USF1-208ENST00000528768 TTF2Q9UNY4 1162 aaKnown RBP13.48□□□□□ -0.25
USF1-208ENST00000528768 CLIC4Q9Y696 253 aa13.48□□□□□ -0.25
USF1-208ENST00000528768 SNCAIPQ9Y6H5 919 aa13.48□□□□□ -0.25
USF1-208ENST00000528768 MAST2Q6P0Q8 1798 aa13.48□□□□□ -0.25
USF1-208ENST00000528768 BECN2A8MW95 431 aa13.47□□□□□ -0.25
USF1-208ENST00000528768 USP17L12C9JPN9 530 aa13.47□□□□□ -0.25
USF1-208ENST00000528768 USP17L21D6R901 530 aa13.47□□□□□ -0.25
USF1-208ENST00000528768 BMP15O95972 392 aa13.47□□□□□ -0.25
USF1-208ENST00000528768 MMP1P03956 469 aa13.47□□□□□ -0.25
USF1-208ENST00000528768 PLCG2P16885 1265 aa13.47□□□□□ -0.25
USF1-208ENST00000528768 KIF5BP33176 963 aa13.47□□□□□ -0.25
USF1-208ENST00000528768 USP5P45974 858 aa13.47□□□□□ -0.25
USF1-208ENST00000528768 SEC23AQ15436 765 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms