RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 SP8Q8IXZ3 490 aa17.39■□□□□ 0.37
USH1C-207ENST00000527720 ZMYND12Q9H0C1 365 aa17.39■□□□□ 0.37
USH1C-207ENST00000527720 NRXN2Q9P2S2 1712 aa17.39■□□□□ 0.37
USH1C-207ENST00000527720 PLIN4Q96Q06 1357 aa17.39■□□□□ 0.37
USH1C-207ENST00000527720 PARP1P09874 1014 aaKnown RBP17.38■□□□□ 0.37
USH1C-207ENST00000527720 DTHD1Q6ZMT9 781 aa17.38■□□□□ 0.37
USH1C-207ENST00000527720 HEATR3Q7Z4Q2 680 aa17.38■□□□□ 0.37
USH1C-207ENST00000527720 CCDC94Q9BW85 323 aaPredicted RBP17.38■□□□□ 0.37
USH1C-207ENST00000527720 MYL1P05976 194 aa17.38■□□□□ 0.37
USH1C-207ENST00000527720 DDR1Q08345 913 aa17.38■□□□□ 0.37
USH1C-207ENST00000527720 APTXQ7Z2E3 356 aaKnown RBP17.38■□□□□ 0.37
USH1C-207ENST00000527720 PDCL2Q8N4E4 241 aa17.38■□□□□ 0.37
USH1C-207ENST00000527720 BAG1Q99933 345 aaPredicted RBP17.38■□□□□ 0.37
USH1C-207ENST00000527720 GOLGA6L9A6NEM1 432 aa17.37■□□□□ 0.37
USH1C-207ENST00000527720 HSP90AA4PQ58FG1 418 aa17.37■□□□□ 0.37
USH1C-207ENST00000527720 TC2NQ8N9U0 490 aa17.37■□□□□ 0.37
USH1C-207ENST00000527720 L2HGDHQ9H9P8 463 aa17.37■□□□□ 0.37
USH1C-207ENST00000527720 PHLPP2Q6ZVD8 1323 aa17.37■□□□□ 0.37
USH1C-207ENST00000527720 C6orf229H3BNL8 230 aa17.37■□□□□ 0.37
USH1C-207ENST00000527720 CASP1P29466 404 aa17.37■□□□□ 0.37
USH1C-207ENST00000527720 GNA11P29992 359 aa17.37■□□□□ 0.37
USH1C-207ENST00000527720 ETF1P62495 437 aaKnown RBP17.37■□□□□ 0.37
USH1C-207ENST00000527720 FILIP1LQ4L180 1135 aa17.37■□□□□ 0.37
USH1C-207ENST00000527720 ZNF658Q5TYW1 1059 aaPredicted RBP17.37■□□□□ 0.37
USH1C-207ENST00000527720 KRT25Q7Z3Z0 450 aa17.37■□□□□ 0.37
USH1C-207ENST00000527720 ERO1AQ96HE7 468 aa17.37■□□□□ 0.37
USH1C-207ENST00000527720 CCSER1Q9C0I3 900 aa17.37■□□□□ 0.37
USH1C-207ENST00000527720 COA1Q9GZY4 146 aa17.37■□□□□ 0.37
USH1C-207ENST00000527720 DISC1Q9NRI5 854 aa17.37■□□□□ 0.37
USH1C-207ENST00000527720 RWDD2AQ9UIY3 292 aa17.37■□□□□ 0.37
USH1C-207ENST00000527720 hCG_1984214I3L0E3 225 aa17.36■□□□□ 0.37
USH1C-207ENST00000527720 STAT6P42226 847 aa17.36■□□□□ 0.37
USH1C-207ENST00000527720 ORC2Q13416 577 aaPredicted RBP17.36■□□□□ 0.37
USH1C-207ENST00000527720 KLHL10Q6JEL2 608 aa17.36■□□□□ 0.37
USH1C-207ENST00000527720 ZNF713Q8N859 430 aaPredicted RBP17.36■□□□□ 0.37
USH1C-207ENST00000527720 RASGRP4Q8TDF6 673 aa17.36■□□□□ 0.37
USH1C-207ENST00000527720 RRP36Q96EU6 259 aaKnown RBP17.36■□□□□ 0.37
USH1C-207ENST00000527720 MTRQ99707 1265 aa17.36■□□□□ 0.37
USH1C-207ENST00000527720 C6orf50Q9HD87 102 aa17.36■□□□□ 0.37
USH1C-207ENST00000527720 ADD3Q9UEY8 706 aaKnown RBP17.36■□□□□ 0.37
USH1C-207ENST00000527720 C10orf71Q711Q0 1435 aa17.36■□□□□ 0.37
USH1C-207ENST00000527720 PPEF1O14829 653 aaPredicted RBP17.36■□□□□ 0.37
USH1C-207ENST00000527720 SLU7O95391 586 aaKnown RBP17.36■□□□□ 0.37
USH1C-207ENST00000527720 SPAG1Q07617 926 aa17.36■□□□□ 0.37
USH1C-207ENST00000527720 DAGLAQ9Y4D2 1042 aa17.36■□□□□ 0.37
USH1C-207ENST00000527720 PBX1P40424 430 aa17.35■□□□□ 0.37
USH1C-207ENST00000527720 INF2Q27J81 1249 aa17.35■□□□□ 0.37
USH1C-207ENST00000527720 SYT10Q6XYQ8 523 aa17.35■□□□□ 0.37
USH1C-207ENST00000527720 HOMER1Q86YM7 354 aa17.35■□□□□ 0.37
USH1C-207ENST00000527720 REXO1L1PQ8IX06 675 aa17.35■□□□□ 0.37
USH1C-207ENST00000527720 CEP95Q96GE4 821 aa17.35■□□□□ 0.37
USH1C-207ENST00000527720 AK8Q96MA6 479 aa17.35■□□□□ 0.37
USH1C-207ENST00000527720 PANX2Q96RD6 677 aa17.35■□□□□ 0.37
USH1C-207ENST00000527720 MAGEF1Q9HAY2 307 aa17.35■□□□□ 0.37
USH1C-207ENST00000527720 CGNQ9P2M7 1197 aaKnown RBP17.35■□□□□ 0.37
USH1C-207ENST00000527720 SEC63Q9UGP8 760 aaKnown RBP17.35■□□□□ 0.37
USH1C-207ENST00000527720 ATP6V0A2Q9Y487 856 aa17.35■□□□□ 0.37
USH1C-207ENST00000527720 ESYT2A0FGR8 921 aa17.35■□□□□ 0.37
USH1C-207ENST00000527720 RPN1P04843 607 aaKnown RBP17.35■□□□□ 0.37
USH1C-207ENST00000527720 NAPAP54920 295 aa17.35■□□□□ 0.37
USH1C-207ENST00000527720 STX17P56962 302 aa17.35■□□□□ 0.37
USH1C-207ENST00000527720 RRAGBQ5VZM2 374 aa17.35■□□□□ 0.37
USH1C-207ENST00000527720 NAA15Q9BXJ9 866 aaKnown RBP17.35■□□□□ 0.37
USH1C-207ENST00000527720 BLZF1Q9H2G9 400 aa17.35■□□□□ 0.37
USH1C-207ENST00000527720 CUEDC2Q9H467 287 aa17.35■□□□□ 0.37
USH1C-207ENST00000527720 CTNND2Q9UQB3 1225 aa17.35■□□□□ 0.37
USH1C-207ENST00000527720 ITIH6Q6UXX5 1313 aa17.34■□□□□ 0.37
USH1C-207ENST00000527720 LRRC10BA6NIK2 292 aa17.34■□□□□ 0.37
USH1C-207ENST00000527720 AKR1B15C9JRZ8 316 aaPredicted RBP17.34■□□□□ 0.37
USH1C-207ENST00000527720 GOLGA8HP0CJ92 632 aa17.34■□□□□ 0.37
USH1C-207ENST00000527720 PAK1Q13153 545 aa17.34■□□□□ 0.37
USH1C-207ENST00000527720 KCNB1Q14721 858 aa17.34■□□□□ 0.37
USH1C-207ENST00000527720 NONOQ15233 471 aaKnown RBP eCLIP17.34■□□□□ 0.37
USH1C-207ENST00000527720 SMYD4Q8IYR2 804 aaPredicted RBP17.34■□□□□ 0.37
USH1C-207ENST00000527720 STAMQ92783 540 aa17.34■□□□□ 0.37
USH1C-207ENST00000527720 LIMA1Q9UHB6 759 aaKnown RBP17.34■□□□□ 0.37
USH1C-207ENST00000527720 ZNF215Q9UL58 517 aaPredicted RBP17.34■□□□□ 0.37
USH1C-207ENST00000527720 PPP2R2CQ9Y2T4 447 aa17.34■□□□□ 0.37
USH1C-207ENST00000527720 MYO3BQ8WXR4 1341 aa17.34■□□□□ 0.37
USH1C-207ENST00000527720 UBA7P41226 1012 aa17.33■□□□□ 0.37
USH1C-207ENST00000527720 KARSQ15046 597 aaKnown RBP17.33■□□□□ 0.37
USH1C-207ENST00000527720 CCDC93Q567U6 631 aa17.33■□□□□ 0.37
USH1C-207ENST00000527720 TRIM65Q6PJ69 517 aa17.33■□□□□ 0.37
USH1C-207ENST00000527720 TMEM60Q9H2L4 133 aa17.33■□□□□ 0.37
USH1C-207ENST00000527720 RIOX1Q9H6W3 641 aa17.33■□□□□ 0.37
USH1C-207ENST00000527720 MTMR7Q9Y216 660 aa17.33■□□□□ 0.37
USH1C-207ENST00000527720 GTF2IP78347 998 aa17.33■□□□□ 0.36
USH1C-207ENST00000527720 GABPAQ06546 454 aa17.33■□□□□ 0.36
USH1C-207ENST00000527720 GOLGA8FQ08AF8 430 aa17.33■□□□□ 0.36
USH1C-207ENST00000527720 GOLGA8DPQ0D2H9 430 aa17.33■□□□□ 0.36
USH1C-207ENST00000527720 SOGA3Q5TF21 947 aa17.33■□□□□ 0.36
USH1C-207ENST00000527720 PPFIBP1Q86W92 1011 aa17.33■□□□□ 0.36
USH1C-207ENST00000527720 ANKRD20A12PQ8NF67 263 aa17.33■□□□□ 0.36
USH1C-207ENST00000527720 GREB1LQ9C091 1923 aaPredicted RBP17.33■□□□□ 0.36
USH1C-207ENST00000527720 MYH4Q9Y623 1939 aa17.32■□□□□ 0.36
USH1C-207ENST00000527720 SMCO2A6NFE2 343 aa17.32■□□□□ 0.36
USH1C-207ENST00000527720 ADKP55263 362 aaKnown RBP17.32■□□□□ 0.36
USH1C-207ENST00000527720 PTPN21Q16825 1174 aa17.32■□□□□ 0.36
USH1C-207ENST00000527720 ASPRV1Q53RT3 343 aa17.32■□□□□ 0.36
USH1C-207ENST00000527720 NAALADL2Q58DX5 795 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms