RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 STAG1Q8WVM7 1258 aa10.5□□□□□ -0.73
CCDC90B-208ENST00000527025 ZKSCAN3Q9BRR0 538 aa10.5□□□□□ -0.73
CCDC90B-208ENST00000527025 MOV10L1Q9BXT6 1211 aaKnown RBP10.5□□□□□ -0.73
CCDC90B-208ENST00000527025 SH2D4AQ9H788 454 aa10.5□□□□□ -0.73
CCDC90B-208ENST00000527025 ZNF287Q9HBT7 754 aa10.5□□□□□ -0.73
CCDC90B-208ENST00000527025 KIAA0100Q14667 2235 aaKnown RBP10.5□□□□□ -0.73
CCDC90B-208ENST00000527025 SMCHD1A6NHR9 2005 aa10.5□□□□□ -0.73
CCDC90B-208ENST00000527025 ZNFX1Q9P2E3 1918 aaKnown RBP10.49□□□□□ -0.73
CCDC90B-208ENST00000527025 VWA5AO00534 786 aa10.49□□□□□ -0.73
CCDC90B-208ENST00000527025 ZNF213O14771 459 aa10.49□□□□□ -0.73
CCDC90B-208ENST00000527025 ADCY3O60266 1144 aa10.49□□□□□ -0.73
CCDC90B-208ENST00000527025 CYP21A2P08686 494 aa10.49□□□□□ -0.73
CCDC90B-208ENST00000527025 EN2P19622 333 aaPredicted RBP10.49□□□□□ -0.73
CCDC90B-208ENST00000527025 HOXD10P28358 340 aa10.49□□□□□ -0.73
CCDC90B-208ENST00000527025 GRK4P32298 578 aa10.49□□□□□ -0.73
CCDC90B-208ENST00000527025 EMP3P54852 163 aa10.49□□□□□ -0.73
CCDC90B-208ENST00000527025 MFAP1P55081 439 aaKnown RBP10.49□□□□□ -0.73
CCDC90B-208ENST00000527025 IRF5Q13568 498 aa10.49□□□□□ -0.73
CCDC90B-208ENST00000527025 CCL14Q16627 93 aa10.49□□□□□ -0.73
CCDC90B-208ENST00000527025 BMP2KLQ5H9B9 411 aa10.49□□□□□ -0.73
CCDC90B-208ENST00000527025 SLFN13Q68D06 897 aa10.49□□□□□ -0.73
CCDC90B-208ENST00000527025 MFSD6Q6ZSS7 791 aa10.49□□□□□ -0.73
CCDC90B-208ENST00000527025 STOX1Q6ZVD7 989 aa10.49□□□□□ -0.73
CCDC90B-208ENST00000527025 GMCL1P1Q8NEA9 526 aa10.49□□□□□ -0.73
CCDC90B-208ENST00000527025 RAET1EQ8TD07 263 aa10.49□□□□□ -0.73
CCDC90B-208ENST00000527025 TMEM47Q9BQJ4 181 aa10.49□□□□□ -0.73
CCDC90B-208ENST00000527025 KRTAP3-3Q9BYR6 98 aa10.49□□□□□ -0.73
CCDC90B-208ENST00000527025 KRTAP3-2Q9BYR7 98 aa10.49□□□□□ -0.73
CCDC90B-208ENST00000527025 GOPCQ9HD26 462 aa10.49□□□□□ -0.73
CCDC90B-208ENST00000527025 TCP11L1Q9NUJ3 509 aa10.49□□□□□ -0.73
CCDC90B-208ENST00000527025 ZNF214Q9UL59 606 aaPredicted RBP10.49□□□□□ -0.73
CCDC90B-208ENST00000527025 PPP1R9AQ9ULJ8 1098 aa10.49□□□□□ -0.73
CCDC90B-208ENST00000527025 CIZ1Q9ULV3 898 aaPredicted RBP10.49□□□□□ -0.73
CCDC90B-208ENST00000527025 STX8Q9UNK0 236 aa10.49□□□□□ -0.73
CCDC90B-208ENST00000527025 RIPK3Q9Y572 518 aa10.49□□□□□ -0.73
CCDC90B-208ENST00000527025 B4E1Z4 1266 aa10.48□□□□□ -0.73
CCDC90B-208ENST00000527025 KDM4AO75164 1064 aa10.48□□□□□ -0.73
CCDC90B-208ENST00000527025 IGHA2P01877 340 aa10.48□□□□□ -0.73
CCDC90B-208ENST00000527025 ERCC3P19447 782 aa10.48□□□□□ -0.73
CCDC90B-208ENST00000527025 CYP2B6P20813 491 aa10.48□□□□□ -0.73
CCDC90B-208ENST00000527025 MCCP23508 829 aa10.48□□□□□ -0.73
CCDC90B-208ENST00000527025 TTBK2Q6IQ55 1244 aa10.48□□□□□ -0.73
CCDC90B-208ENST00000527025 CYB5R4Q7L1T6 521 aa10.48□□□□□ -0.73
CCDC90B-208ENST00000527025 PLEKHH3Q7Z736 793 aa10.48□□□□□ -0.73
CCDC90B-208ENST00000527025 PXYLP1Q8TE99 480 aa10.48□□□□□ -0.73
CCDC90B-208ENST00000527025 TRIB2Q92519 343 aa10.48□□□□□ -0.73
CCDC90B-208ENST00000527025 MAP4K1Q92918 833 aa10.48□□□□□ -0.73
CCDC90B-208ENST00000527025 COA7Q96BR5 231 aa10.48□□□□□ -0.73
CCDC90B-208ENST00000527025 LSG1Q9H089 658 aaKnown RBP10.48□□□□□ -0.73
CCDC90B-208ENST00000527025 SPATC1LQ9H0A9 340 aa10.48□□□□□ -0.73
CCDC90B-208ENST00000527025 UNC93B1Q9H1C4 597 aa10.48□□□□□ -0.73
CCDC90B-208ENST00000527025 TOMM22Q9NS69 142 aa10.48□□□□□ -0.73
CCDC90B-208ENST00000527025 FLRT1Q9NZU1 646 aa10.48□□□□□ -0.73
CCDC90B-208ENST00000527025 ZSWIM5Q9P217 1185 aa10.48□□□□□ -0.73
CCDC90B-208ENST00000527025 INHAP05111 366 aa10.47□□□□□ -0.73
CCDC90B-208ENST00000527025 BMP3P12645 472 aa10.47□□□□□ -0.73
CCDC90B-208ENST00000527025 HOXB3P14651 431 aaPredicted RBP10.47□□□□□ -0.73
CCDC90B-208ENST00000527025 PTPREP23469 700 aa10.47□□□□□ -0.73
CCDC90B-208ENST00000527025 MAPK4P31152 587 aa10.47□□□□□ -0.73
CCDC90B-208ENST00000527025 SNAP25P60880 206 aa10.47□□□□□ -0.73
CCDC90B-208ENST00000527025 KCTD1Q719H9 257 aa10.47□□□□□ -0.73
CCDC90B-208ENST00000527025 NPLOC4Q8TAT6 608 aa10.47□□□□□ -0.73
CCDC90B-208ENST00000527025 GTF3C2Q8WUA4 911 aaPredicted RBP10.47□□□□□ -0.73
CCDC90B-208ENST00000527025 SHISA4Q96DD7 197 aa10.47□□□□□ -0.73
CCDC90B-208ENST00000527025 GMCL1Q96IK5 515 aa10.47□□□□□ -0.73
CCDC90B-208ENST00000527025 HS3ST6Q96QI5 342 aa10.47□□□□□ -0.73
CCDC90B-208ENST00000527025 SLF1Q9BQI6 1058 aa10.47□□□□□ -0.73
CCDC90B-208ENST00000527025 ESYT1Q9BSJ8 1104 aa10.47□□□□□ -0.73
CCDC90B-208ENST00000527025 SYNPO2Q9UMS6 1093 aa10.47□□□□□ -0.73
CCDC90B-208ENST00000527025 MTMR7Q9Y216 660 aa10.47□□□□□ -0.73
CCDC90B-208ENST00000527025 RAD50Q92878 1312 aa10.47□□□□□ -0.73
CCDC90B-208ENST00000527025 TMEM232C9JQI7 657 aa10.46□□□□□ -0.73
CCDC90B-208ENST00000527025 COBLO75128 1261 aa10.46□□□□□ -0.73
CCDC90B-208ENST00000527025 CCL5P13501 91 aa10.46□□□□□ -0.73
CCDC90B-208ENST00000527025 TAL1P17542 331 aaPredicted RBP10.46□□□□□ -0.73
CCDC90B-208ENST00000527025 GRB14Q14449 540 aa10.46□□□□□ -0.73
CCDC90B-208ENST00000527025 PLS1Q14651 629 aa10.46□□□□□ -0.73
CCDC90B-208ENST00000527025 NBPF11Q86T75 865 aa10.46□□□□□ -0.73
CCDC90B-208ENST00000527025 PRPF38AQ8NAV1 312 aaKnown RBP10.46□□□□□ -0.73
CCDC90B-208ENST00000527025 KIFC2Q96AC6 838 aa10.46□□□□□ -0.73
CCDC90B-208ENST00000527025 NUDT12Q9BQG2 462 aa10.46□□□□□ -0.73
CCDC90B-208ENST00000527025 SENP2Q9HC62 589 aa10.46□□□□□ -0.73
CCDC90B-208ENST00000527025 BOLA1Q9Y3E2 137 aa10.46□□□□□ -0.73
CCDC90B-208ENST00000527025 ZNF536O15090 1300 aa10.46□□□□□ -0.73
CCDC90B-208ENST00000527025 FRMPD2Q68DX3 1309 aaPredicted RBP10.45□□□□□ -0.74
CCDC90B-208ENST00000527025 SLC15A5A6NIM6 579 aa10.45□□□□□ -0.74
CCDC90B-208ENST00000527025 TOP1P11387 765 aaKnown RBP10.45□□□□□ -0.74
CCDC90B-208ENST00000527025 PCP11498 1178 aaKnown RBP10.45□□□□□ -0.74
CCDC90B-208ENST00000527025 XRCC5P13010 732 aaKnown RBP10.45□□□□□ -0.74
CCDC90B-208ENST00000527025 SLC16A2P36021 539 aa10.45□□□□□ -0.74
CCDC90B-208ENST00000527025 STAT3P40763 770 aa10.45□□□□□ -0.74
CCDC90B-208ENST00000527025 CCNA1P78396 465 aa10.45□□□□□ -0.74
CCDC90B-208ENST00000527025 MAP2K5Q13163 448 aa10.45□□□□□ -0.74
CCDC90B-208ENST00000527025 SEC23AQ15436 765 aa10.45□□□□□ -0.74
CCDC90B-208ENST00000527025 IMMTQ16891 758 aaKnown RBP10.45□□□□□ -0.74
CCDC90B-208ENST00000527025 MAP3K21Q5TCX8 1036 aa10.45□□□□□ -0.74
CCDC90B-208ENST00000527025 WDR78Q5VTH9 848 aa10.45□□□□□ -0.74
CCDC90B-208ENST00000527025 NCAPG2Q86XI2 1143 aa10.45□□□□□ -0.74
CCDC90B-208ENST00000527025 RIOX2Q8IUF8 465 aa10.45□□□□□ -0.74
CCDC90B-208ENST00000527025 MB21D1Q8N884 522 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms