RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 COL15A1P39059 1388 aa7.74□□□□□ -1.17
TGFBR3-207ENST00000525962 NF2P35240 595 aa7.74□□□□□ -1.17
TGFBR3-207ENST00000525962 NAA25Q14CX7 972 aa7.74□□□□□ -1.17
TGFBR3-207ENST00000525962 USPL1Q5W0Q7 1092 aa7.74□□□□□ -1.17
TGFBR3-207ENST00000525962 FBXW10Q5XX13 1052 aa7.74□□□□□ -1.17
TGFBR3-207ENST00000525962 DNAAF5Q86Y56 855 aa7.74□□□□□ -1.17
TGFBR3-207ENST00000525962 TEX2Q8IWB9 1127 aa7.74□□□□□ -1.17
TGFBR3-207ENST00000525962 CRACR2BQ8N4Y2 399 aaPredicted RBP7.74□□□□□ -1.17
TGFBR3-207ENST00000525962 LPIN2Q92539 896 aa7.74□□□□□ -1.17
TGFBR3-207ENST00000525962 GPR101Q96P66 508 aaPredicted RBP7.74□□□□□ -1.17
TGFBR3-207ENST00000525962 CAPS2Q9BXY5 557 aa7.74□□□□□ -1.17
TGFBR3-207ENST00000525962 ABCB4P21439 1286 aa7.74□□□□□ -1.17
TGFBR3-207ENST00000525962 ARID4AP29374 1257 aaPredicted RBP7.74□□□□□ -1.17
TGFBR3-207ENST00000525962 RFX5P48382 616 aaPredicted RBP7.74□□□□□ -1.17
TGFBR3-207ENST00000525962 TMEM266Q2M3C6 531 aa7.74□□□□□ -1.17
TGFBR3-207ENST00000525962 TTLL11Q8NHH1 800 aa7.74□□□□□ -1.17
TGFBR3-207ENST00000525962 PPM1EQ8WY54 764 aa7.74□□□□□ -1.17
TGFBR3-207ENST00000525962 STRBPQ96SI9 672 aaKnown RBP7.74□□□□□ -1.17
TGFBR3-207ENST00000525962 KRT12Q99456 494 aa7.74□□□□□ -1.17
TGFBR3-207ENST00000525962 CTDP1Q9Y5B0 961 aaPredicted RBP7.74□□□□□ -1.17
TGFBR3-207ENST00000525962 SHPRHQ149N8 1683 aa7.74□□□□□ -1.17
TGFBR3-207ENST00000525962 ERBB3P21860 1342 aa7.74□□□□□ -1.17
TGFBR3-207ENST00000525962 H7C1W4 665 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 FMNL1O95466 1100 aaPredicted RBP7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 CD44P16070 742 aaKnown RBP7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 PTPREP23469 700 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 PRCPP42785 496 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 MAP3K9P80192 1104 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 TBC1D31Q96DN5 1066 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 JPH2Q9BR39 696 aaPredicted RBP7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 LY9Q9HBG7 655 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 EPB41L5Q9HCM4 733 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 AGPAT5Q9NUQ2 364 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 BTG4Q9NY30 223 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 SERPINA10Q9UK55 444 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 MAP2P11137 1827 aaKnown RBP7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 FRMPD2Q68DX3 1309 aaPredicted RBP7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 A2ML1A8K2U0 1454 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 CALM1P0DP23 149 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 CALM2P0DP24 149 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 CALM3P0DP25 149 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 AMPD3Q01432 767 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 NFRKBQ6P4R8 1299 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 TRIM65Q6PJ69 517 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 CABP7Q86V35 215 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 EXOC4Q96A65 974 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 ZSCAN10Q96SZ4 725 aaPredicted RBP7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 FUT8Q9BYC5 575 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 VWDEQ8N2E2 1590 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 LOC102724159A0A0B4J2E5 919 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 KCNK3O14649 394 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 RIMBP2O15034 1052 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 IFNAR2P48551 515 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 PWP2Q15269 919 aaKnown RBP7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 FAM182BQ5T319 152 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 TGFBRAP1Q8WUH2 860 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 RPGRQ92834 1020 aaKnown RBP7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 MS4A14Q96JA4 679 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 TEX13AQ9BXU3 409 aaPredicted RBP7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 GOLPH3Q9H4A6 298 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 PRM3Q9NNZ6 103 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 BAIAP2L1Q9UHR4 511 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 BCS1LQ9Y276 419 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 HYOU1Q9Y4L1 999 aa7.73□□□□□ -1.17
TGFBR3-207ENST00000525962 USP17L3A6NCW0 530 aa7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 USP17L4A6NCW7 530 aa7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 PDE8AO60658 829 aa7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 VIMP08670 466 aaKnown RBP7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 IFNAR1P17181 557 aa7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 ACTN3Q08043 901 aaPredicted RBP7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 WHAMMP3Q1A5X7 153 aa7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 KIAA0753Q2KHM9 967 aa7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 RBM43Q6ZSC3 357 aaKnown RBP7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 USP17L1Q7RTZ2 530 aa7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 FAM114A1Q8IWE2 563 aa7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 SLC44A5Q8NCS7 719 aa7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 CNOT6LQ96LI5 555 aaKnown RBP7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 L2HGDHQ9H9P8 463 aa7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 ABHD10Q9NUJ1 306 aa7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 NFU1Q9UMS0 254 aa7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 MROH2AA6NES4 1674 aa7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 WTIPA6NIX2 430 aaPredicted RBP7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 CHMP2AO43633 222 aa7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 USP17L8P0C7I0 530 aa7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 BMP6P22004 513 aa7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 POLR2FP61218 127 aaKnown RBP7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 EZH2Q15910 746 aaKnown RBP7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 TSGA10IPQ3SY00 556 aa7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 HERC4Q5GLZ8 1057 aaPredicted RBP7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 VPS36Q86VN1 386 aa7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 NBPF5PQ86XG9 351 aaPredicted RBP7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 ZBTB38Q8NAP3 1195 aaPredicted RBP7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 FAM71BQ8TC56 605 aa7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 GJA10Q969M2 543 aa7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 AP1M1Q9BXS5 423 aa7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 EIF4A3P38919 411 aaKnown RBP7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 VPS41P49754 854 aa7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 SNX29Q8TEQ0 813 aa7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 CABS1Q96KC9 395 aa7.72□□□□□ -1.17
TGFBR3-207ENST00000525962 SELENOOQ9BVL4 669 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms