RNA–Protein interactions for RNA: ENST00000525378.5

NDUFS3-204, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 779 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-204ENST00000525378 C1orf53Q5VUE5 145 aa14.01□□□□□ -0.17
NDUFS3-204ENST00000525378 ZNF444Q8N0Y2 327 aaPredicted RBP14.01□□□□□ -0.17
NDUFS3-204ENST00000525378 CPXCR1Q8N123 301 aa14.01□□□□□ -0.17
NDUFS3-204ENST00000525378 PRPF38AQ8NAV1 312 aaKnown RBP14.01□□□□□ -0.17
NDUFS3-204ENST00000525378 PI4K2BQ8TCG2 481 aa14.01□□□□□ -0.17
NDUFS3-204ENST00000525378 BADQ92934 168 aa14.01□□□□□ -0.17
NDUFS3-204ENST00000525378 TRIM43Q96BQ3 446 aaPredicted RBP14.01□□□□□ -0.17
NDUFS3-204ENST00000525378 CEP95Q96GE4 821 aa14.01□□□□□ -0.17
NDUFS3-204ENST00000525378 TEX13BQ9BXU2 312 aa14.01□□□□□ -0.17
NDUFS3-204ENST00000525378 PHF24Q9UPV7 400 aa14.01□□□□□ -0.17
NDUFS3-204ENST00000525378 PCDHB15Q9Y5E8 787 aa14.01□□□□□ -0.17
NDUFS3-204ENST00000525378 DLL1O00548 723 aa14□□□□□ -0.17
NDUFS3-204ENST00000525378 SNAI1O95863 264 aaPredicted RBP14□□□□□ -0.17
NDUFS3-204ENST00000525378 AKR1A1P14550 325 aa14□□□□□ -0.17
NDUFS3-204ENST00000525378 SLC4A3P48751 1232 aa14□□□□□ -0.17
NDUFS3-204ENST00000525378 SHHQ15465 462 aa14□□□□□ -0.17
NDUFS3-204ENST00000525378 C9orf50Q5SZB4 431 aa14□□□□□ -0.17
NDUFS3-204ENST00000525378 LRRC47Q8N1G4 583 aaKnown RBP14□□□□□ -0.17
NDUFS3-204ENST00000525378 MKL1Q969V6 931 aa14□□□□□ -0.17
NDUFS3-204ENST00000525378 RAVER2Q9HCJ3 691 aaKnown RBP14□□□□□ -0.17
NDUFS3-204ENST00000525378 MTMR4Q9NYA4 1195 aa14□□□□□ -0.17
NDUFS3-204ENST00000525378 TTC41PQ6P2S7 1318 aa13.99□□□□□ -0.17
NDUFS3-204ENST00000525378 DNAJC25-GNG10A0A024R161 153 aa13.99□□□□□ -0.17
NDUFS3-204ENST00000525378 A0A1W2PQ45 241 aaPredicted RBP13.99□□□□□ -0.17
NDUFS3-204ENST00000525378 A0A1W2PQY0 241 aa13.99□□□□□ -0.17
NDUFS3-204ENST00000525378 ATP2A1O14983 1001 aa13.99□□□□□ -0.17
NDUFS3-204ENST00000525378 ZBED4O75132 1171 aa13.99□□□□□ -0.17
NDUFS3-204ENST00000525378 ADAMTS4O75173 837 aa13.99□□□□□ -0.17
NDUFS3-204ENST00000525378 ITGB8P26012 769 aa13.99□□□□□ -0.17
NDUFS3-204ENST00000525378 TLE2Q04725 743 aa13.99□□□□□ -0.17
NDUFS3-204ENST00000525378 RNF180Q86T96 592 aa13.99□□□□□ -0.17
NDUFS3-204ENST00000525378 KIFC2Q96AC6 838 aa13.99□□□□□ -0.17
NDUFS3-204ENST00000525378 DDX11Q96FC9 970 aa13.99□□□□□ -0.17
NDUFS3-204ENST00000525378 FAM161BQ96MY7 647 aa13.99□□□□□ -0.17
NDUFS3-204ENST00000525378 GUCD1Q96NT3 240 aa13.99□□□□□ -0.17
NDUFS3-204ENST00000525378 SLC38A10Q9HBR0 1119 aa13.99□□□□□ -0.17
NDUFS3-204ENST00000525378 CNPY2Q9Y2B0 182 aa13.99□□□□□ -0.17
NDUFS3-204ENST00000525378 PLIN4Q96Q06 1357 aa13.98□□□□□ -0.17
NDUFS3-204ENST00000525378 SYNGAP1Q96PV0 1343 aa13.98□□□□□ -0.17
NDUFS3-204ENST00000525378 ERC2O15083 957 aa13.98□□□□□ -0.17
NDUFS3-204ENST00000525378 TTLL1O95922 423 aa13.98□□□□□ -0.17
NDUFS3-204ENST00000525378 IRX5P78411 483 aaPredicted RBP13.98□□□□□ -0.17
NDUFS3-204ENST00000525378 ZMYM1Q5SVZ6 1142 aa13.98□□□□□ -0.17
NDUFS3-204ENST00000525378 FAM109BQ6ICB4 259 aaPredicted RBP13.98□□□□□ -0.17
NDUFS3-204ENST00000525378 MAMDC4Q6UXC1 1216 aa13.98□□□□□ -0.17
NDUFS3-204ENST00000525378 MSL3Q8N5Y2 521 aaKnown RBP13.98□□□□□ -0.17
NDUFS3-204ENST00000525378 NEDD1Q8NHV4 660 aa13.98□□□□□ -0.17
NDUFS3-204ENST00000525378 FGD4Q96M96 766 aa13.98□□□□□ -0.17
NDUFS3-204ENST00000525378 FSD1Q9BTV5 496 aa13.98□□□□□ -0.17
NDUFS3-204ENST00000525378 ZNF287Q9HBT7 754 aa13.98□□□□□ -0.17
NDUFS3-204ENST00000525378 FEM1BQ9UK73 627 aa13.98□□□□□ -0.17
NDUFS3-204ENST00000525378 LCTP09848 1927 aa13.98□□□□□ -0.17
NDUFS3-204ENST00000525378 SYNRGQ9UMZ2 1314 aa13.97□□□□□ -0.17
NDUFS3-204ENST00000525378 MYADML2A6NDP7 307 aa13.97□□□□□ -0.17
NDUFS3-204ENST00000525378 ADCY6O43306 1168 aa13.97□□□□□ -0.17
NDUFS3-204ENST00000525378 CLTBP09497 229 aa13.97□□□□□ -0.17
NDUFS3-204ENST00000525378 TSPY3P0CV98 308 aa13.97□□□□□ -0.17
NDUFS3-204ENST00000525378 TSPY8P0CW00 308 aa13.97□□□□□ -0.17
NDUFS3-204ENST00000525378 PPARAQ07869 468 aa13.97□□□□□ -0.17
NDUFS3-204ENST00000525378 LRRFIP1Q32MZ4 808 aaKnown RBP13.97□□□□□ -0.17
NDUFS3-204ENST00000525378 SLFN13Q68D06 897 aa13.97□□□□□ -0.17
NDUFS3-204ENST00000525378 CCSAPQ6IQ19 270 aaPredicted RBP13.97□□□□□ -0.17
NDUFS3-204ENST00000525378 CCDC129Q6ZRS4 1044 aa13.97□□□□□ -0.17
NDUFS3-204ENST00000525378 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.97□□□□□ -0.17
NDUFS3-204ENST00000525378 GMCL1P1Q8NEA9 526 aa13.97□□□□□ -0.17
NDUFS3-204ENST00000525378 KLHDC9Q8NEP7 349 aa13.97□□□□□ -0.17
NDUFS3-204ENST00000525378 CHMP4CQ96CF2 233 aa13.97□□□□□ -0.17
NDUFS3-204ENST00000525378 NAPBQ9H115 298 aa13.97□□□□□ -0.17
NDUFS3-204ENST00000525378 ZHX1Q9UKY1 873 aaPredicted RBP13.97□□□□□ -0.17
NDUFS3-204ENST00000525378 FAM184BQ9ULE4 1060 aa13.97□□□□□ -0.17
NDUFS3-204ENST00000525378 CTDP1Q9Y5B0 961 aaPredicted RBP13.97□□□□□ -0.17
NDUFS3-204ENST00000525378 SALL3Q9BXA9 1300 aa13.96□□□□□ -0.17
NDUFS3-204ENST00000525378 FOXP2O15409 715 aa13.96□□□□□ -0.17
NDUFS3-204ENST00000525378 PQBP1O60828 265 aaKnown RBP13.96□□□□□ -0.17
NDUFS3-204ENST00000525378 BMP3P12645 472 aa13.96□□□□□ -0.17
NDUFS3-204ENST00000525378 TFAP4Q01664 338 aa13.96□□□□□ -0.17
NDUFS3-204ENST00000525378 PDE4BQ07343 736 aa13.96□□□□□ -0.17
NDUFS3-204ENST00000525378 ZNF467Q7Z7K2 595 aaPredicted RBP13.96□□□□□ -0.17
NDUFS3-204ENST00000525378 ANKRD35Q8N283 1001 aa13.96□□□□□ -0.17
NDUFS3-204ENST00000525378 NACAP1Q9BZK3 213 aa13.96□□□□□ -0.17
NDUFS3-204ENST00000525378 INCENPQ9NQS7 918 aa13.96□□□□□ -0.17
NDUFS3-204ENST00000525378 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.96□□□□□ -0.17
NDUFS3-204ENST00000525378 SYNPO2Q9UMS6 1093 aa13.96□□□□□ -0.17
NDUFS3-204ENST00000525378 TACC3Q9Y6A5 838 aa13.96□□□□□ -0.17
NDUFS3-204ENST00000525378 LRRC37A2A6NM11 1700 aa13.95□□□□□ -0.18
NDUFS3-204ENST00000525378 TMEM232C9JQI7 657 aa13.95□□□□□ -0.18
NDUFS3-204ENST00000525378 MX1P20591 662 aa13.95□□□□□ -0.18
NDUFS3-204ENST00000525378 ACLYP53396 1101 aa13.95□□□□□ -0.18
NDUFS3-204ENST00000525378 OAZ1P54368 228 aa13.95□□□□□ -0.18
NDUFS3-204ENST00000525378 EPHB4P54760 987 aa13.95□□□□□ -0.18
NDUFS3-204ENST00000525378 CTDSPL2Q05D32 466 aa13.95□□□□□ -0.18
NDUFS3-204ENST00000525378 FAAP100Q0VG06 881 aa13.95□□□□□ -0.18
NDUFS3-204ENST00000525378 ACVR2BQ13705 512 aa13.95□□□□□ -0.18
NDUFS3-204ENST00000525378 KCNA10Q16322 511 aa13.95□□□□□ -0.18
NDUFS3-204ENST00000525378 ZNF697Q5TEC3 545 aa13.95□□□□□ -0.18
NDUFS3-204ENST00000525378 CHST13Q8NET6 341 aa13.95□□□□□ -0.18
NDUFS3-204ENST00000525378 TSEN34Q9BSV6 310 aaKnown RBP13.95□□□□□ -0.18
NDUFS3-204ENST00000525378 STARD7Q9NQZ5 370 aa13.95□□□□□ -0.18
NDUFS3-204ENST00000525378 HOMER2Q9NSB8 354 aa13.95□□□□□ -0.18
NDUFS3-204ENST00000525378 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms