RNA–Protein interactions for RNA: ENST00000524966.1

AP001001.2-201, humanhuman

TSL 3 BASIC

Gene AP001001.2, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001001.2-201ENST00000524966 RIOX2Q8IUF8 465 aa12.74□□□□□ -0.37
AP001001.2-201ENST00000524966 SOCS4Q8WXH5 440 aa12.74□□□□□ -0.37
AP001001.2-201ENST00000524966 CHMP4CQ96CF2 233 aa12.74□□□□□ -0.37
AP001001.2-201ENST00000524966 ZKSCAN3Q9BRR0 538 aa12.74□□□□□ -0.37
AP001001.2-201ENST00000524966 KRT23Q9C075 422 aa12.74□□□□□ -0.37
AP001001.2-201ENST00000524966 MROH8Q9H579 483 aa12.74□□□□□ -0.37
AP001001.2-201ENST00000524966 CNNM2Q9H8M5 875 aa12.74□□□□□ -0.37
AP001001.2-201ENST00000524966 SLC38A10Q9HBR0 1119 aa12.74□□□□□ -0.37
AP001001.2-201ENST00000524966 BIN2Q9UBW5 565 aaPredicted RBP12.74□□□□□ -0.37
AP001001.2-201ENST00000524966 RBM8AQ9Y5S9 174 aaKnown RBP12.74□□□□□ -0.37
AP001001.2-201ENST00000524966 CEP290O15078 2479 aa12.74□□□□□ -0.37
AP001001.2-201ENST00000524966 A0A0G2JMZ2 1700 aa12.74□□□□□ -0.37
AP001001.2-201ENST00000524966 SMCHD1A6NHR9 2005 aa12.73□□□□□ -0.37
AP001001.2-201ENST00000524966 ATP2A1O14983 1001 aa12.73□□□□□ -0.37
AP001001.2-201ENST00000524966 SLC25A27O95847 323 aa12.73□□□□□ -0.37
AP001001.2-201ENST00000524966 MYCP01106 439 aaPredicted RBP12.73□□□□□ -0.37
AP001001.2-201ENST00000524966 HOXC6P09630 235 aa12.73□□□□□ -0.37
AP001001.2-201ENST00000524966 MAP2K5Q13163 448 aa12.73□□□□□ -0.37
AP001001.2-201ENST00000524966 GRB14Q14449 540 aa12.73□□□□□ -0.37
AP001001.2-201ENST00000524966 CCDC178Q5BJE1 867 aa12.73□□□□□ -0.37
AP001001.2-201ENST00000524966 WDR78Q5VTH9 848 aa12.73□□□□□ -0.37
AP001001.2-201ENST00000524966 KIAA1211Q6ZU35 1233 aa12.73□□□□□ -0.37
AP001001.2-201ENST00000524966 KCTD1Q719H9 257 aa12.73□□□□□ -0.37
AP001001.2-201ENST00000524966 RASGRP2Q7LDG7 609 aa12.73□□□□□ -0.37
AP001001.2-201ENST00000524966 IQCA1Q86XH1 822 aa12.73□□□□□ -0.37
AP001001.2-201ENST00000524966 CHURC1Q8WUH1 139 aa12.73□□□□□ -0.37
AP001001.2-201ENST00000524966 KIFC2Q96AC6 838 aa12.73□□□□□ -0.37
AP001001.2-201ENST00000524966 ZSCAN10Q96SZ4 725 aaPredicted RBP12.73□□□□□ -0.37
AP001001.2-201ENST00000524966 TMEM106CQ9BVX2 250 aa12.73□□□□□ -0.37
AP001001.2-201ENST00000524966 E7EWF7 191 aa12.72□□□□□ -0.37
AP001001.2-201ENST00000524966 TNRC18O15417 2968 aaPredicted RBP12.72□□□□□ -0.37
AP001001.2-201ENST00000524966 ZBED4O75132 1171 aa12.72□□□□□ -0.37
AP001001.2-201ENST00000524966 IGHA2P01877 340 aa12.72□□□□□ -0.37
AP001001.2-201ENST00000524966 INHAP05111 366 aa12.72□□□□□ -0.37
AP001001.2-201ENST00000524966 SNHG28P0DPA3 235 aa12.72□□□□□ -0.37
AP001001.2-201ENST00000524966 FDX1P10109 184 aa12.72□□□□□ -0.37
AP001001.2-201ENST00000524966 CCL5P13501 91 aa12.72□□□□□ -0.37
AP001001.2-201ENST00000524966 EN2P19622 333 aaPredicted RBP12.72□□□□□ -0.37
AP001001.2-201ENST00000524966 RGS2P41220 211 aa12.72□□□□□ -0.37
AP001001.2-201ENST00000524966 STAT2P52630 851 aa12.72□□□□□ -0.37
AP001001.2-201ENST00000524966 UBXN2AP68543 259 aa12.72□□□□□ -0.37
AP001001.2-201ENST00000524966 TRIM32Q13049 653 aa12.72□□□□□ -0.37
AP001001.2-201ENST00000524966 NECTIN1Q15223 517 aa12.72□□□□□ -0.37
AP001001.2-201ENST00000524966 CCL14Q16627 93 aa12.72□□□□□ -0.37
AP001001.2-201ENST00000524966 BTNL9Q6UXG8 535 aa12.72□□□□□ -0.37
AP001001.2-201ENST00000524966 STOX1Q6ZVD7 989 aa12.72□□□□□ -0.37
AP001001.2-201ENST00000524966 CYB5R4Q7L1T6 521 aa12.72□□□□□ -0.37
AP001001.2-201ENST00000524966 FAM160B2Q86V87 743 aa12.72□□□□□ -0.37
AP001001.2-201ENST00000524966 NCAPG2Q86XI2 1143 aa12.72□□□□□ -0.37
AP001001.2-201ENST00000524966 ABRAQ8N0Z2 381 aa12.72□□□□□ -0.37
AP001001.2-201ENST00000524966 ENAHQ8N8S7 591 aaPredicted RBP12.72□□□□□ -0.37
AP001001.2-201ENST00000524966 DCAF4Q8WV16 495 aa12.72□□□□□ -0.37
AP001001.2-201ENST00000524966 TRIB2Q92519 343 aa12.72□□□□□ -0.37
AP001001.2-201ENST00000524966 UNC93B1Q9H1C4 597 aa12.72□□□□□ -0.37
AP001001.2-201ENST00000524966 RIPK3Q9Y572 518 aa12.72□□□□□ -0.37
AP001001.2-201ENST00000524966 IVNS1ABPQ9Y6Y0 642 aa12.72□□□□□ -0.37
AP001001.2-201ENST00000524966 COBLO75128 1261 aa12.71□□□□□ -0.37
AP001001.2-201ENST00000524966 CDC45O75419 566 aa12.71□□□□□ -0.37
AP001001.2-201ENST00000524966 HMGCRP04035 888 aa12.71□□□□□ -0.37
AP001001.2-201ENST00000524966 GJB1P08034 283 aa12.71□□□□□ -0.37
AP001001.2-201ENST00000524966 ATXN8OSP0DMR3 200 aa12.71□□□□□ -0.37
AP001001.2-201ENST00000524966 PDHBP11177 359 aa12.71□□□□□ -0.37
AP001001.2-201ENST00000524966 ADORA2AP29274 412 aa12.71□□□□□ -0.37
AP001001.2-201ENST00000524966 SEC23AQ15436 765 aa12.71□□□□□ -0.37
AP001001.2-201ENST00000524966 MAP3K21Q5TCX8 1036 aa12.71□□□□□ -0.37
AP001001.2-201ENST00000524966 TTBK2Q6IQ55 1244 aa12.71□□□□□ -0.37
AP001001.2-201ENST00000524966 TRMT44Q8IYL2 757 aaKnown RBP12.71□□□□□ -0.37
AP001001.2-201ENST00000524966 CPXCR1Q8N123 301 aa12.71□□□□□ -0.37
AP001001.2-201ENST00000524966 NPLOC4Q8TAT6 608 aa12.71□□□□□ -0.37
AP001001.2-201ENST00000524966 TEX13BQ9BXU2 312 aa12.71□□□□□ -0.37
AP001001.2-201ENST00000524966 RNF208Q9H0X6 261 aa12.71□□□□□ -0.37
AP001001.2-201ENST00000524966 CWC22Q9HCG8 908 aaKnown RBP12.71□□□□□ -0.37
AP001001.2-201ENST00000524966 RAVER2Q9HCJ3 691 aaKnown RBP12.71□□□□□ -0.37
AP001001.2-201ENST00000524966 FLRT1Q9NZU1 646 aa12.71□□□□□ -0.37
AP001001.2-201ENST00000524966 PRR12Q9ULL5 1215 aa12.71□□□□□ -0.37
AP001001.2-201ENST00000524966 MTMR7Q9Y216 660 aa12.71□□□□□ -0.37
AP001001.2-201ENST00000524966 ZNF536O15090 1300 aa12.7□□□□□ -0.38
AP001001.2-201ENST00000524966 GABBR2O75899 941 aa12.7□□□□□ -0.38
AP001001.2-201ENST00000524966 FCER1AP12319 257 aa12.7□□□□□ -0.38
AP001001.2-201ENST00000524966 OAZ1P54368 228 aa12.7□□□□□ -0.38
AP001001.2-201ENST00000524966 ZNF543Q08ER8 600 aa12.7□□□□□ -0.38
AP001001.2-201ENST00000524966 TRDNQ13061 729 aa12.7□□□□□ -0.38
AP001001.2-201ENST00000524966 SNRNP48Q6IEG0 339 aaKnown RBP12.7□□□□□ -0.38
AP001001.2-201ENST00000524966 PNMA1Q8ND90 353 aa12.7□□□□□ -0.38
AP001001.2-201ENST00000524966 APBA2Q99767 749 aa12.7□□□□□ -0.38
AP001001.2-201ENST00000524966 ANO2Q9NQ90 1003 aa12.7□□□□□ -0.38
AP001001.2-201ENST00000524966 RBBP6Q7Z6E9 1792 aaKnown RBP12.69□□□□□ -0.38
AP001001.2-201ENST00000524966 TNKSO95271 1327 aa12.69□□□□□ -0.38
AP001001.2-201ENST00000524966 RPTORQ8N122 1335 aa12.69□□□□□ -0.38
AP001001.2-201ENST00000524966 BAZ2BQ9UIF8 2168 aaKnown RBP12.69□□□□□ -0.38
AP001001.2-201ENST00000524966 SLC27A2O14975 620 aa12.69□□□□□ -0.38
AP001001.2-201ENST00000524966 COPB2P35606 906 aa12.69□□□□□ -0.38
AP001001.2-201ENST00000524966 SLC16A2P36021 539 aa12.69□□□□□ -0.38
AP001001.2-201ENST00000524966 GJA8P48165 433 aa12.69□□□□□ -0.38
AP001001.2-201ENST00000524966 MLLT1Q03111 559 aaPredicted RBP12.69□□□□□ -0.38
AP001001.2-201ENST00000524966 CACNB2Q08289 660 aaPredicted RBP12.69□□□□□ -0.38
AP001001.2-201ENST00000524966 IKQ13123 557 aaPredicted RBP12.69□□□□□ -0.38
AP001001.2-201ENST00000524966 CCDC96Q2M329 555 aa12.69□□□□□ -0.38
AP001001.2-201ENST00000524966 CREB3L3Q68CJ9 461 aa12.69□□□□□ -0.38
AP001001.2-201ENST00000524966 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms