RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 ABI2Q9NYB9 513 aaPredicted RBP9.51□□□□□ -0.89
NEDD8-203ENST00000524927 ZNF646O15015 1829 aaPredicted RBP9.5□□□□□ -0.89
NEDD8-203ENST00000524927 ST20-MTHFSA0A0A6YYL1 179 aa9.5□□□□□ -0.89
NEDD8-203ENST00000524927 UBE2Q2LH0YL09 131 aa9.5□□□□□ -0.89
NEDD8-203ENST00000524927 EFSO43281 561 aa9.5□□□□□ -0.89
NEDD8-203ENST00000524927 SORBS3O60504 671 aa9.5□□□□□ -0.89
NEDD8-203ENST00000524927 RAD17O75943 681 aa9.5□□□□□ -0.89
NEDD8-203ENST00000524927 MTHFSP49914 203 aa9.5□□□□□ -0.89
NEDD8-203ENST00000524927 DAB2P98082 770 aa9.5□□□□□ -0.89
NEDD8-203ENST00000524927 LAMC2Q13753 1193 aa9.5□□□□□ -0.89
NEDD8-203ENST00000524927 TMC4Q7Z404 712 aa9.5□□□□□ -0.89
NEDD8-203ENST00000524927 C1orf127Q8N9H9 656 aa9.5□□□□□ -0.89
NEDD8-203ENST00000524927 MARK1Q9P0L2 795 aa9.5□□□□□ -0.89
NEDD8-203ENST00000524927 VTI1BQ9UEU0 232 aa9.5□□□□□ -0.89
NEDD8-203ENST00000524927 MANSC4A6NHS7 340 aaPredicted RBP9.49□□□□□ -0.89
NEDD8-203ENST00000524927 GJB1P08034 283 aa9.49□□□□□ -0.89
NEDD8-203ENST00000524927 TARSP26639 723 aaKnown RBP9.49□□□□□ -0.89
NEDD8-203ENST00000524927 CAP1Q01518 475 aa9.49□□□□□ -0.89
NEDD8-203ENST00000524927 TCIRG1Q13488 830 aa9.49□□□□□ -0.89
NEDD8-203ENST00000524927 TPTE2Q6XPS3 522 aa9.49□□□□□ -0.89
NEDD8-203ENST00000524927 SUPT20HQ8NEM7 779 aa9.49□□□□□ -0.89
NEDD8-203ENST00000524927 SH3TC2Q8TF17 1288 aa9.49□□□□□ -0.89
NEDD8-203ENST00000524927 PMEPA1Q969W9 287 aa9.49□□□□□ -0.89
NEDD8-203ENST00000524927 CCDC74AQ96AQ1 378 aa9.49□□□□□ -0.89
NEDD8-203ENST00000524927 CDX2Q99626 313 aaPredicted RBP9.49□□□□□ -0.89
NEDD8-203ENST00000524927 MDFIQ99750 246 aa9.49□□□□□ -0.89
NEDD8-203ENST00000524927 GSX2Q9BZM3 304 aa9.49□□□□□ -0.89
NEDD8-203ENST00000524927 GGA3Q9NZ52 723 aa9.49□□□□□ -0.89
NEDD8-203ENST00000524927 NOP53Q9NZM5 478 aaKnown RBP9.49□□□□□ -0.89
NEDD8-203ENST00000524927 CNTN3Q9P232 1028 aa9.49□□□□□ -0.89
NEDD8-203ENST00000524927 RAB3GAP2Q9H2M9 1393 aa9.49□□□□□ -0.89
NEDD8-203ENST00000524927 CACNA1GO43497 2377 aa9.48□□□□□ -0.89
NEDD8-203ENST00000524927 PRAMEF22A3QJZ6 481 aa9.48□□□□□ -0.89
NEDD8-203ENST00000524927 FARP2O94887 1054 aaPredicted RBP9.48□□□□□ -0.89
NEDD8-203ENST00000524927 STARD3NLO95772 234 aa9.48□□□□□ -0.89
NEDD8-203ENST00000524927 POLR3DP05423 398 aaPredicted RBP9.48□□□□□ -0.89
NEDD8-203ENST00000524927 CES1P23141 567 aa9.48□□□□□ -0.89
NEDD8-203ENST00000524927 GNA15P30679 374 aa9.48□□□□□ -0.89
NEDD8-203ENST00000524927 MRE11P49959 708 aa9.48□□□□□ -0.89
NEDD8-203ENST00000524927 COL9A3Q14050 684 aaPredicted RBP9.48□□□□□ -0.89
NEDD8-203ENST00000524927 CRY2Q49AN0 593 aa9.48□□□□□ -0.89
NEDD8-203ENST00000524927 MOB2Q70IA6 237 aa9.48□□□□□ -0.89
NEDD8-203ENST00000524927 FRMD6Q96NE9 622 aa9.48□□□□□ -0.89
NEDD8-203ENST00000524927 PIK3R2O00459 728 aa9.47□□□□□ -0.89
NEDD8-203ENST00000524927 CAMTA2O94983 1202 aa9.47□□□□□ -0.89
NEDD8-203ENST00000524927 RARAP10276 462 aa9.47□□□□□ -0.89
NEDD8-203ENST00000524927 CAPN2P17655 700 aa9.47□□□□□ -0.89
NEDD8-203ENST00000524927 CRHR2Q13324 411 aa9.47□□□□□ -0.89
NEDD8-203ENST00000524927 MRPL58Q14197 206 aaKnown RBP9.47□□□□□ -0.89
NEDD8-203ENST00000524927 RSPO4Q2I0M5 234 aaPredicted RBP9.47□□□□□ -0.89
NEDD8-203ENST00000524927 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.47□□□□□ -0.89
NEDD8-203ENST00000524927 PLEKHO1Q53GL0 409 aaPredicted RBP9.47□□□□□ -0.89
NEDD8-203ENST00000524927 ZNF468Q5VIY5 522 aaPredicted RBP9.47□□□□□ -0.89
NEDD8-203ENST00000524927 RTFDC1Q9BY42 306 aaPredicted RBP9.47□□□□□ -0.89
NEDD8-203ENST00000524927 BACH2Q9BYV9 841 aa9.47□□□□□ -0.89
NEDD8-203ENST00000524927 AVENQ9NQS1 362 aaPredicted RBP9.47□□□□□ -0.89
NEDD8-203ENST00000524927 KIF7Q2M1P5 1343 aa9.47□□□□□ -0.89
NEDD8-203ENST00000524927 IGF2BP3O00425 579 aaKnown RBP eCLIP9.46□□□□□ -0.9
NEDD8-203ENST00000524927 EREGO14944 169 aa9.46□□□□□ -0.9
NEDD8-203ENST00000524927 RECKO95980 971 aa9.46□□□□□ -0.9
NEDD8-203ENST00000524927 TCF3P15923 654 aa9.46□□□□□ -0.9
NEDD8-203ENST00000524927 RPS12P25398 132 aaKnown RBP9.46□□□□□ -0.9
NEDD8-203ENST00000524927 HOXA10P31260 410 aaPredicted RBP9.46□□□□□ -0.9
NEDD8-203ENST00000524927 IL6STP40189 918 aaPredicted RBP9.46□□□□□ -0.9
NEDD8-203ENST00000524927 GATA4P43694 442 aa9.46□□□□□ -0.9
NEDD8-203ENST00000524927 SPEM2Q0P670 501 aa9.46□□□□□ -0.9
NEDD8-203ENST00000524927 KIAA2012Q0VF49 1180 aa9.46□□□□□ -0.9
NEDD8-203ENST00000524927 AMOTQ4VCS5 1084 aa9.46□□□□□ -0.9
NEDD8-203ENST00000524927 OTUD7BQ6GQQ9 843 aa9.46□□□□□ -0.9
NEDD8-203ENST00000524927 ZNF530Q6P9A1 599 aaPredicted RBP9.46□□□□□ -0.9
NEDD8-203ENST00000524927 CLEC4GQ6UXB4 293 aa9.46□□□□□ -0.9
NEDD8-203ENST00000524927 EPS8L3Q8TE67 593 aaKnown RBP9.46□□□□□ -0.9
NEDD8-203ENST00000524927 LRFN3Q9BTN0 628 aa9.46□□□□□ -0.9
NEDD8-203ENST00000524927 UBE2OQ9C0C9 1292 aaKnown RBP9.46□□□□□ -0.9
NEDD8-203ENST00000524927 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.46□□□□□ -0.9
NEDD8-203ENST00000524927 NFKB1P19838 968 aa9.45□□□□□ -0.9
NEDD8-203ENST00000524927 PRMT2P55345 433 aa9.45□□□□□ -0.9
NEDD8-203ENST00000524927 KIF4BQ2VIQ3 1234 aa9.45□□□□□ -0.9
NEDD8-203ENST00000524927 C8orf86Q6ZUL3 223 aa9.45□□□□□ -0.9
NEDD8-203ENST00000524927 TMEM87AQ8NBN3 555 aa9.45□□□□□ -0.9
NEDD8-203ENST00000524927 BHMTQ93088 406 aa9.45□□□□□ -0.9
NEDD8-203ENST00000524927 PUS7Q96PZ0 661 aaKnown RBP9.45□□□□□ -0.9
NEDD8-203ENST00000524927 TMX4Q9H1E5 349 aaPredicted RBP9.45□□□□□ -0.9
NEDD8-203ENST00000524927 CHRDQ9H2X0 955 aa9.45□□□□□ -0.9
NEDD8-203ENST00000524927 NPHS2Q9NP85 383 aa9.45□□□□□ -0.9
NEDD8-203ENST00000524927 PRR12Q9ULL5 1215 aa9.45□□□□□ -0.9
NEDD8-203ENST00000524927 COL2A1P02458 1487 aaPredicted RBP9.45□□□□□ -0.9
NEDD8-203ENST00000524927 FAM229AH3BQW9 127 aa9.44□□□□□ -0.9
NEDD8-203ENST00000524927 FYB1O15117 783 aa9.44□□□□□ -0.9
NEDD8-203ENST00000524927 MMP20O60882 483 aa9.44□□□□□ -0.9
NEDD8-203ENST00000524927 GADD45BO75293 160 aaPredicted RBP9.44□□□□□ -0.9
NEDD8-203ENST00000524927 CYP2E1P05181 493 aaPredicted RBP9.44□□□□□ -0.9
NEDD8-203ENST00000524927 PSAPP07602 524 aa9.44□□□□□ -0.9
NEDD8-203ENST00000524927 EIF4BP23588 611 aaKnown RBP9.44□□□□□ -0.9
NEDD8-203ENST00000524927 MAGEA10P43363 369 aaPredicted RBP9.44□□□□□ -0.9
NEDD8-203ENST00000524927 NEUROD1Q13562 356 aa9.44□□□□□ -0.9
NEDD8-203ENST00000524927 C1orf141Q5JVX7 400 aa9.44□□□□□ -0.9
NEDD8-203ENST00000524927 NKAPLQ5M9Q1 402 aa9.44□□□□□ -0.9
NEDD8-203ENST00000524927 ZMYM1Q5SVZ6 1142 aa9.44□□□□□ -0.9
NEDD8-203ENST00000524927 PI16Q6UXB8 463 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms