RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 HDAC9Q9UKV0 1011 aa17.42■□□□□ 0.38
BEST1-204ENST00000524926 VIL1P09327 827 aaKnown RBP17.42■□□□□ 0.38
BEST1-204ENST00000524926 GNA11P29992 359 aa17.42■□□□□ 0.38
BEST1-204ENST00000524926 PPP4R3BQ5MIZ7 849 aa17.42■□□□□ 0.38
BEST1-204ENST00000524926 FAM177A1Q8N128 213 aaPredicted RBP17.42■□□□□ 0.38
BEST1-204ENST00000524926 SYMPKQ92797 1274 aaKnown RBP17.42■□□□□ 0.38
BEST1-204ENST00000524926 TMOD2Q9NZR1 351 aa17.42■□□□□ 0.38
BEST1-204ENST00000524926 PPP1R1BQ9UD71 204 aaPredicted RBP17.42■□□□□ 0.38
BEST1-204ENST00000524926 ENTPD3O75355 529 aa17.41■□□□□ 0.38
BEST1-204ENST00000524926 CLCN1P35523 988 aa17.41■□□□□ 0.38
BEST1-204ENST00000524926 ZNF543Q08ER8 600 aa17.41■□□□□ 0.38
BEST1-204ENST00000524926 INF2Q27J81 1249 aa17.41■□□□□ 0.38
BEST1-204ENST00000524926 CCDC96Q2M329 555 aa17.41■□□□□ 0.38
BEST1-204ENST00000524926 SHROOM1Q2M3G4 852 aaPredicted RBP17.41■□□□□ 0.38
BEST1-204ENST00000524926 ZKSCAN5Q9Y2L8 839 aa17.41■□□□□ 0.38
BEST1-204ENST00000524926 PCDHA5Q9Y5H7 936 aa17.41■□□□□ 0.38
BEST1-204ENST00000524926 TCP10L2B9ZVM9 353 aa17.41■□□□□ 0.38
BEST1-204ENST00000524926 DLGAP5Q15398 846 aa17.41■□□□□ 0.38
BEST1-204ENST00000524926 DHX58Q96C10 678 aa17.41■□□□□ 0.38
BEST1-204ENST00000524926 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.41■□□□□ 0.38
BEST1-204ENST00000524926 CLRN2A0PK11 232 aa17.4■□□□□ 0.38
BEST1-204ENST00000524926 EEF2P13639 858 aaKnown RBP17.4■□□□□ 0.38
BEST1-204ENST00000524926 POLD1P28340 1107 aa17.4■□□□□ 0.38
BEST1-204ENST00000524926 TGFB2P61812 414 aa17.4■□□□□ 0.38
BEST1-204ENST00000524926 POSTNQ15063 836 aa17.4■□□□□ 0.38
BEST1-204ENST00000524926 TTBK2Q6IQ55 1244 aa17.4■□□□□ 0.38
BEST1-204ENST00000524926 TATDN1Q6P1N9 297 aa17.4■□□□□ 0.38
BEST1-204ENST00000524926 KCTD1Q719H9 257 aa17.4■□□□□ 0.38
BEST1-204ENST00000524926 DRC7Q8IY82 874 aa17.4■□□□□ 0.38
BEST1-204ENST00000524926 NIM1KQ8IY84 436 aa17.4■□□□□ 0.38
BEST1-204ENST00000524926 ELOA2Q8IYF1 753 aaPredicted RBP17.4■□□□□ 0.38
BEST1-204ENST00000524926 ZNF830Q96NB3 372 aaPredicted RBP17.4■□□□□ 0.38
BEST1-204ENST00000524926 CSRNP1Q96S65 589 aa17.4■□□□□ 0.38
BEST1-204ENST00000524926 KANSL2Q9H9L4 492 aa17.4■□□□□ 0.38
BEST1-204ENST00000524926 SPDYE2BA6NHP3 402 aa17.4■□□□□ 0.38
BEST1-204ENST00000524926 GDF11O95390 407 aa17.4■□□□□ 0.38
BEST1-204ENST00000524926 SPDYE6P0CI01 402 aa17.4■□□□□ 0.38
BEST1-204ENST00000524926 MDM2Q00987 491 aaPredicted RBP17.4■□□□□ 0.38
BEST1-204ENST00000524926 SEPT2Q15019 361 aa17.4■□□□□ 0.38
BEST1-204ENST00000524926 KANK3Q6NY19 840 aa17.4■□□□□ 0.38
BEST1-204ENST00000524926 ZNRF3Q9ULT6 936 aa17.4■□□□□ 0.38
BEST1-204ENST00000524926 SIPA1L1O43166 1804 aa17.39■□□□□ 0.37
BEST1-204ENST00000524926 SLC16A2P36021 539 aa17.39■□□□□ 0.37
BEST1-204ENST00000524926 ZNF75DP51815 510 aa17.39■□□□□ 0.37
BEST1-204ENST00000524926 GPATCH4Q5T3I0 446 aaKnown RBP17.39■□□□□ 0.37
BEST1-204ENST00000524926 GRAMD1CQ8IYS0 662 aa17.39■□□□□ 0.37
BEST1-204ENST00000524926 ADGRF4Q8IZF3 695 aa17.39■□□□□ 0.37
BEST1-204ENST00000524926 COA7Q96BR5 231 aa17.39■□□□□ 0.37
BEST1-204ENST00000524926 BPIFA3Q9BQP9 254 aa17.39■□□□□ 0.37
BEST1-204ENST00000524926 VPS33BQ9H267 617 aa17.39■□□□□ 0.37
BEST1-204ENST00000524926 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.39■□□□□ 0.37
BEST1-204ENST00000524926 MYH4Q9Y623 1939 aa17.39■□□□□ 0.37
BEST1-204ENST00000524926 A0A087X0B3 334 aa17.39■□□□□ 0.37
BEST1-204ENST00000524926 GOLGA6L6A8MZA4 724 aa17.39■□□□□ 0.37
BEST1-204ENST00000524926 ACTN4O43707 911 aaKnown RBP17.39■□□□□ 0.37
BEST1-204ENST00000524926 ABCB5Q2M3G0 1257 aa17.39■□□□□ 0.37
BEST1-204ENST00000524926 PLA2G4DQ86XP0 818 aa17.39■□□□□ 0.37
BEST1-204ENST00000524926 CCDC125Q86Z20 511 aa17.39■□□□□ 0.37
BEST1-204ENST00000524926 CCDC34Q96HJ3 373 aa17.39■□□□□ 0.37
BEST1-204ENST00000524926 GMLQ99445 158 aa17.39■□□□□ 0.37
BEST1-204ENST00000524926 ICA1Q05084 483 aa17.38■□□□□ 0.37
BEST1-204ENST00000524926 IL17AQ16552 155 aa17.38■□□□□ 0.37
BEST1-204ENST00000524926 DALRD3Q5D0E6 543 aaKnown RBP17.38■□□□□ 0.37
BEST1-204ENST00000524926 ARL6IP4Q66PJ3 421 aaKnown RBP17.38■□□□□ 0.37
BEST1-204ENST00000524926 TMEM179Q6ZVK1 233 aa17.38■□□□□ 0.37
BEST1-204ENST00000524926 KRT25Q7Z3Z0 450 aa17.38■□□□□ 0.37
BEST1-204ENST00000524926 JMJD4Q9H9V9 463 aa17.38■□□□□ 0.37
BEST1-204ENST00000524926 NYAP2Q9P242 653 aa17.38■□□□□ 0.37
BEST1-204ENST00000524926 BIN2Q9UBW5 565 aaPredicted RBP17.38■□□□□ 0.37
BEST1-204ENST00000524926 COL4A5P29400 1685 aa17.38■□□□□ 0.37
BEST1-204ENST00000524926 hCG_1984214I3L0E3 225 aa17.38■□□□□ 0.37
BEST1-204ENST00000524926 PRR29P0C7W0 189 aa17.38■□□□□ 0.37
BEST1-204ENST00000524926 NONOQ15233 471 aaKnown RBP eCLIP17.38■□□□□ 0.37
BEST1-204ENST00000524926 ZNF713Q8N859 430 aaPredicted RBP17.38■□□□□ 0.37
BEST1-204ENST00000524926 C4orf32Q8N8J7 132 aa17.38■□□□□ 0.37
BEST1-204ENST00000524926 MKL1Q969V6 931 aa17.38■□□□□ 0.37
BEST1-204ENST00000524926 TTC12Q9H892 705 aaPredicted RBP17.38■□□□□ 0.37
BEST1-204ENST00000524926 ATRNL1Q5VV63 1379 aa17.38■□□□□ 0.37
BEST1-204ENST00000524926 GREB1LQ9C091 1923 aaPredicted RBP17.37■□□□□ 0.37
BEST1-204ENST00000524926 PNMA6FA0A0J9YX94 578 aa17.37■□□□□ 0.37
BEST1-204ENST00000524926 SLC1A4P43007 532 aa17.37■□□□□ 0.37
BEST1-204ENST00000524926 RBM26Q5T8P6 1007 aaKnown RBP17.37■□□□□ 0.37
BEST1-204ENST00000524926 JAKMIP3Q5VZ66 844 aa17.37■□□□□ 0.37
BEST1-204ENST00000524926 SMARCE1Q969G3 411 aa17.37■□□□□ 0.37
BEST1-204ENST00000524926 MTFR1LQ9H019 292 aa17.37■□□□□ 0.37
BEST1-204ENST00000524926 ZNF70Q9UC06 446 aaPredicted RBP17.37■□□□□ 0.37
BEST1-204ENST00000524926 PSME4Q14997 1843 aa17.37■□□□□ 0.37
BEST1-204ENST00000524926 SMTNL1A8MU46 457 aa17.37■□□□□ 0.37
BEST1-204ENST00000524926 LETM2Q2VYF4 491 aa17.37■□□□□ 0.37
BEST1-204ENST00000524926 SLFN13Q68D06 897 aa17.37■□□□□ 0.37
BEST1-204ENST00000524926 SARM1Q6SZW1 724 aa17.37■□□□□ 0.37
BEST1-204ENST00000524926 REXO1Q8N1G1 1221 aaKnown RBP17.37■□□□□ 0.37
BEST1-204ENST00000524926 VEZTQ9HBM0 779 aa17.37■□□□□ 0.37
BEST1-204ENST00000524926 ESYT2A0FGR8 921 aa17.36■□□□□ 0.37
BEST1-204ENST00000524926 USP17L10C9JJH3 530 aa17.36■□□□□ 0.37
BEST1-204ENST00000524926 SLFN14P0C7P3 912 aa17.36■□□□□ 0.37
BEST1-204ENST00000524926 AFMP43652 599 aa17.36■□□□□ 0.37
BEST1-204ENST00000524926 DTHD1Q6ZMT9 781 aa17.36■□□□□ 0.37
BEST1-204ENST00000524926 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.36■□□□□ 0.37
BEST1-204ENST00000524926 KIF13BQ9NQT8 1826 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms