RNA–Protein interactions for RNA: ENST00000523991.5

MDM2-222, Transcript of MDM2 proto-oncogene, human

TSL 1 (best)

Gene MDM2, Length 505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MDM2-222	ENST00000523991	TLL1	O43897	1013 aa		10.53	□□□□□ -0.72
MDM2-222	ENST00000523991	FLOT1	O75955	427 aa		10.53	□□□□□ -0.72
MDM2-222	ENST00000523991	ZNF865	P0CJ78	1059 aa	Predicted RBP	10.53	□□□□□ -0.72
MDM2-222	ENST00000523991	IER5L	Q5T953	404 aa		10.53	□□□□□ -0.72
MDM2-222	ENST00000523991	HLA-C	Q95604	372 aa		10.53	□□□□□ -0.72
MDM2-222	ENST00000523991	LENG1	Q96BZ8	264 aa	Predicted RBP	10.53	□□□□□ -0.72
MDM2-222	ENST00000523991	SLC4A7	Q9Y6M7	1214 aa		10.53	□□□□□ -0.72
MDM2-222	ENST00000523991	PI4K2B	G5E9Z4	385 aa		10.52	□□□□□ -0.73
MDM2-222	ENST00000523991	PGK2	P07205	417 aa		10.52	□□□□□ -0.73
MDM2-222	ENST00000523991	TAL1	P17542	331 aa	Predicted RBP	10.52	□□□□□ -0.73
MDM2-222	ENST00000523991	POU3F3	P20264	500 aa	Predicted RBP	10.52	□□□□□ -0.73
MDM2-222	ENST00000523991	CST5	P28325	142 aa	Predicted RBP	10.52	□□□□□ -0.73
MDM2-222	ENST00000523991	COPB2	P35606	906 aa		10.52	□□□□□ -0.73
MDM2-222	ENST00000523991	CDK7	P50613	346 aa		10.52	□□□□□ -0.73
MDM2-222	ENST00000523991	RABGGTB	P53611	331 aa		10.52	□□□□□ -0.73
MDM2-222	ENST00000523991	TTC39A	Q5SRH9	613 aa		10.52	□□□□□ -0.73
MDM2-222	ENST00000523991	OTOP2	Q7RTS6	562 aa		10.52	□□□□□ -0.73
MDM2-222	ENST00000523991	ADGRA1	Q86SQ6	560 aa		10.52	□□□□□ -0.73
MDM2-222	ENST00000523991	FAM126B	Q8IXS8	530 aa		10.52	□□□□□ -0.73
MDM2-222	ENST00000523991	MSL3	Q8N5Y2	521 aa	Known RBP	10.52	□□□□□ -0.73
MDM2-222	ENST00000523991	KLHDC9	Q8NEP7	349 aa		10.52	□□□□□ -0.73
MDM2-222	ENST00000523991	CDCA7L	Q96GN5	454 aa		10.52	□□□□□ -0.73
MDM2-222	ENST00000523991	LARP6	Q9BRS8	491 aa	Known RBP	10.52	□□□□□ -0.73
MDM2-222	ENST00000523991	MTCH2	Q9Y6C9	303 aa		10.52	□□□□□ -0.73
MDM2-222	ENST00000523991	PLXNA1	Q9UIW2	1896 aa		10.52	□□□□□ -0.73
MDM2-222	ENST00000523991	ZBBX	A8MT70	800 aa		10.51	□□□□□ -0.73
MDM2-222	ENST00000523991	MPHOSPH10	O00566	681 aa	Known RBP	10.51	□□□□□ -0.73
MDM2-222	ENST00000523991	SRGAP3	O43295	1099 aa		10.51	□□□□□ -0.73
MDM2-222	ENST00000523991	DUSP11	O75319	330 aa	Known RBP	10.51	□□□□□ -0.73
MDM2-222	ENST00000523991	ASGR1	P07306	291 aa		10.51	□□□□□ -0.73
MDM2-222	ENST00000523991	C6orf222	P0C671	652 aa	Predicted RBP	10.51	□□□□□ -0.73
MDM2-222	ENST00000523991	CYP2C18	P33260	490 aa		10.51	□□□□□ -0.73
MDM2-222	ENST00000523991	IRX5	P78411	483 aa	Predicted RBP	10.51	□□□□□ -0.73
MDM2-222	ENST00000523991	SEPT2	Q15019	361 aa		10.51	□□□□□ -0.73
MDM2-222	ENST00000523991	CSPP1	Q1MSJ5	1256 aa		10.51	□□□□□ -0.73
MDM2-222	ENST00000523991	ZNF792	Q3KQV3	632 aa		10.51	□□□□□ -0.73
MDM2-222	ENST00000523991	CCDC184	Q52MB2	194 aa		10.51	□□□□□ -0.73
MDM2-222	ENST00000523991	CCDC158	Q5M9N0	1113 aa		10.51	□□□□□ -0.73
MDM2-222	ENST00000523991	CCSAP	Q6IQ19	270 aa	Predicted RBP	10.51	□□□□□ -0.73
MDM2-222	ENST00000523991	RPUSD2	Q8IZ73	545 aa	Known RBP	10.51	□□□□□ -0.73
MDM2-222	ENST00000523991	ATG4C	Q96DT6	458 aa		10.51	□□□□□ -0.73
MDM2-222	ENST00000523991	HIPK3	Q9H422	1215 aa		10.51	□□□□□ -0.73
MDM2-222	ENST00000523991	SH2D4A	Q9H788	454 aa		10.51	□□□□□ -0.73
MDM2-222	ENST00000523991	ZHX1	Q9UKY1	873 aa	Predicted RBP	10.51	□□□□□ -0.73
MDM2-222	ENST00000523991		A0A0G2JMZ2	1700 aa		10.5	□□□□□ -0.73
MDM2-222	ENST00000523991	ATP2A2	P16615	1042 aa	Known RBP	10.5	□□□□□ -0.73
MDM2-222	ENST00000523991	CYP7A1	P22680	504 aa		10.5	□□□□□ -0.73
MDM2-222	ENST00000523991	GUCY1A2	P33402	732 aa		10.5	□□□□□ -0.73
MDM2-222	ENST00000523991	DYNLL1	P63167	89 aa	Known RBP	10.5	□□□□□ -0.73
MDM2-222	ENST00000523991	TMEM67	Q5HYA8	995 aa		10.5	□□□□□ -0.73
MDM2-222	ENST00000523991	RIOX2	Q8IUF8	465 aa		10.5	□□□□□ -0.73
MDM2-222	ENST00000523991	SSH1	Q8WYL5	1049 aa		10.5	□□□□□ -0.73
MDM2-222	ENST00000523991	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.5	□□□□□ -0.73	4e-9	■■■□□ 16.2
MDM2-222	ENST00000523991	UIMC1	Q96RL1	719 aa		10.5	□□□□□ -0.73
MDM2-222	ENST00000523991	KCNH6	Q9H252	994 aa		10.5	□□□□□ -0.73
MDM2-222	ENST00000523991	ARHGEF10L	Q9HCE6	1279 aa		10.5	□□□□□ -0.73
MDM2-222	ENST00000523991	SNRK	Q9NRH2	765 aa		10.5	□□□□□ -0.73
MDM2-222	ENST00000523991	LRRC37A2	A6NM11	1700 aa		10.5	□□□□□ -0.73
MDM2-222	ENST00000523991		A0A1W2PRG0	241 aa		10.49	□□□□□ -0.73
MDM2-222	ENST00000523991	MYADML2	A6NDP7	307 aa		10.49	□□□□□ -0.73
MDM2-222	ENST00000523991	WDR46	O15213	610 aa	Known RBP	10.49	□□□□□ -0.73
MDM2-222	ENST00000523991	GABBR2	O75899	941 aa		10.49	□□□□□ -0.73
MDM2-222	ENST00000523991	POLR3D	P05423	398 aa	Predicted RBP	10.49	□□□□□ -0.73
MDM2-222	ENST00000523991	ALAD	P13716	330 aa		10.49	□□□□□ -0.73
MDM2-222	ENST00000523991	MYOG	P15173	224 aa		10.49	□□□□□ -0.73
MDM2-222	ENST00000523991	SHMT1	P34896	483 aa		10.49	□□□□□ -0.73
MDM2-222	ENST00000523991	NHLH1	Q02575	133 aa		10.49	□□□□□ -0.73
MDM2-222	ENST00000523991	TMEM132B	Q14DG7	1078 aa		10.49	□□□□□ -0.73
MDM2-222	ENST00000523991	GNAS	Q5JWF2	1037 aa		10.49	□□□□□ -0.73
MDM2-222	ENST00000523991	DDX27	Q96GQ7	796 aa	Known RBP	10.49	□□□□□ -0.73
MDM2-222	ENST00000523991	SEZ6L	Q9BYH1	1024 aa		10.49	□□□□□ -0.73
MDM2-222	ENST00000523991	MRS2	Q9HD23	443 aa		10.49	□□□□□ -0.73
MDM2-222	ENST00000523991	RFXAP	O00287	272 aa		10.48	□□□□□ -0.73
MDM2-222	ENST00000523991	CD4	P01730	458 aa		10.48	□□□□□ -0.73
MDM2-222	ENST00000523991	CYP2E1	P05181	493 aa	Predicted RBP	10.48	□□□□□ -0.73
MDM2-222	ENST00000523991	CA3	P07451	260 aa		10.48	□□□□□ -0.73
MDM2-222	ENST00000523991	PFKM	P08237	780 aa		10.48	□□□□□ -0.73
MDM2-222	ENST00000523991	STAT3	P40763	770 aa		10.48	□□□□□ -0.73
MDM2-222	ENST00000523991	CCL23	P55773	120 aa		10.48	□□□□□ -0.73
MDM2-222	ENST00000523991	GJA9	P57773	515 aa		10.48	□□□□□ -0.73
MDM2-222	ENST00000523991	G3BP1	Q13283	466 aa	Known RBP eCLIP	10.48	□□□□□ -0.73
MDM2-222	ENST00000523991	ALDH1L2	Q3SY69	923 aa		10.48	□□□□□ -0.73
MDM2-222	ENST00000523991	TMEM179	Q6ZVK1	233 aa		10.48	□□□□□ -0.73
MDM2-222	ENST00000523991	MIGA1	Q8NAN2	632 aa		10.48	□□□□□ -0.73
MDM2-222	ENST00000523991	DDX11	Q96FC9	970 aa		10.48	□□□□□ -0.73
MDM2-222	ENST00000523991	UPF3A	Q9H1J1	476 aa	Known RBP	10.48	□□□□□ -0.73
MDM2-222	ENST00000523991	CERS4	Q9HA82	394 aa		10.48	□□□□□ -0.73
MDM2-222	ENST00000523991	SMC4	Q9NTJ3	1288 aa		10.48	□□□□□ -0.73
MDM2-222	ENST00000523991	TCF20	Q9UGU0	1960 aa	Known RBP	10.48	□□□□□ -0.73
MDM2-222	ENST00000523991	BDP1	A6H8Y1	2624 aa		10.48	□□□□□ -0.73
MDM2-222	ENST00000523991	FOCAD	Q5VW36	1801 aa		10.47	□□□□□ -0.73
MDM2-222	ENST00000523991	KIF28P	B7ZC32	967 aa		10.47	□□□□□ -0.73
MDM2-222	ENST00000523991	CABYR	O75952	493 aa		10.47	□□□□□ -0.73
MDM2-222	ENST00000523991	SNAI1	O95863	264 aa	Predicted RBP	10.47	□□□□□ -0.73
MDM2-222	ENST00000523991	GNAI3	P08754	354 aa		10.47	□□□□□ -0.73
MDM2-222	ENST00000523991	ACTN1	P12814	892 aa		10.47	□□□□□ -0.73
MDM2-222	ENST00000523991	SSTR3	P32745	418 aa	Predicted RBP	10.47	□□□□□ -0.73
MDM2-222	ENST00000523991	MTX1	Q13505	466 aa		10.47	□□□□□ -0.73
MDM2-222	ENST00000523991	CAMK2B	Q13554	666 aa		10.47	□□□□□ -0.73
MDM2-222	ENST00000523991	ACVR2B	Q13705	512 aa		10.47	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms