RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 POLR2AP24928 1970 aaKnown RBP11.03□□□□□ -0.64
SHPRH-209ENST00000521977 ATAD5Q96QE3 1844 aa11.02□□□□□ -0.64
SHPRH-209ENST00000521977 A0A1W2PRG0 241 aa11.02□□□□□ -0.65
SHPRH-209ENST00000521977 ASNSP08243 561 aa11.02□□□□□ -0.65
SHPRH-209ENST00000521977 EPHX2P34913 555 aa11.02□□□□□ -0.65
SHPRH-209ENST00000521977 AKAP17AQ02040 695 aaKnown RBP11.02□□□□□ -0.65
SHPRH-209ENST00000521977 GUCY1B3Q02153 619 aa11.02□□□□□ -0.65
SHPRH-209ENST00000521977 KIF23Q02241 960 aaPredicted RBP11.02□□□□□ -0.65
SHPRH-209ENST00000521977 ZNF543Q08ER8 600 aa11.02□□□□□ -0.65
SHPRH-209ENST00000521977 PFKFB3Q16875 520 aaPredicted RBP11.02□□□□□ -0.65
SHPRH-209ENST00000521977 GPATCH4Q5T3I0 446 aaKnown RBP11.02□□□□□ -0.65
SHPRH-209ENST00000521977 KRT40Q6A162 431 aa11.02□□□□□ -0.65
SHPRH-209ENST00000521977 OTUD7BQ6GQQ9 843 aa11.02□□□□□ -0.65
SHPRH-209ENST00000521977 SHISA4Q96DD7 197 aa11.02□□□□□ -0.65
SHPRH-209ENST00000521977 GMCL1Q96IK5 515 aa11.02□□□□□ -0.65
SHPRH-209ENST00000521977 ZNF341Q9BYN7 854 aa11.02□□□□□ -0.65
SHPRH-209ENST00000521977 TAF1DQ9H5J8 278 aaPredicted RBP11.02□□□□□ -0.65
SHPRH-209ENST00000521977 GJB4Q9NTQ9 266 aa11.02□□□□□ -0.65
SHPRH-209ENST00000521977 TMX2Q9Y320 296 aa11.02□□□□□ -0.65
SHPRH-209ENST00000521977 IQCA1LA6NCM1 817 aa11.01□□□□□ -0.65
SHPRH-209ENST00000521977 DDX11L8A8MPP1 907 aa11.01□□□□□ -0.65
SHPRH-209ENST00000521977 CTNND1O60716 968 aaKnown RBP11.01□□□□□ -0.65
SHPRH-209ENST00000521977 MMP1P03956 469 aa11.01□□□□□ -0.65
SHPRH-209ENST00000521977 GOLGA8HP0CJ92 632 aa11.01□□□□□ -0.65
SHPRH-209ENST00000521977 SCG2P13521 617 aa11.01□□□□□ -0.65
SHPRH-209ENST00000521977 FOSBP53539 338 aa11.01□□□□□ -0.65
SHPRH-209ENST00000521977 ATP2B2Q01814 1243 aa11.01□□□□□ -0.65
SHPRH-209ENST00000521977 SLFN13Q68D06 897 aa11.01□□□□□ -0.65
SHPRH-209ENST00000521977 MCTP1Q6DN14 999 aa11.01□□□□□ -0.65
SHPRH-209ENST00000521977 FERMT3Q86UX7 667 aa11.01□□□□□ -0.65
SHPRH-209ENST00000521977 FAM177A1Q8N128 213 aaPredicted RBP11.01□□□□□ -0.65
SHPRH-209ENST00000521977 TMEM87AQ8NBN3 555 aa11.01□□□□□ -0.65
SHPRH-209ENST00000521977 DCPSQ96C86 337 aaKnown RBP11.01□□□□□ -0.65
SHPRH-209ENST00000521977 CHAMP1Q96JM3 812 aa11.01□□□□□ -0.65
SHPRH-209ENST00000521977 PHF20Q9BVI0 1012 aa11.01□□□□□ -0.65
SHPRH-209ENST00000521977 ARHGEF10LQ9HCE6 1279 aa11.01□□□□□ -0.65
SHPRH-209ENST00000521977 TCHHQ07283 1943 aa11.01□□□□□ -0.65
SHPRH-209ENST00000521977 MYH15Q9Y2K3 1946 aa11.01□□□□□ -0.65
SHPRH-209ENST00000521977 PAPPA2Q9BXP8 1791 aa11□□□□□ -0.65
SHPRH-209ENST00000521977 DOCK1Q14185 1865 aa11□□□□□ -0.65
SHPRH-209ENST00000521977 hCG_1642624A0A1W2PR95 340 aa11□□□□□ -0.65
SHPRH-209ENST00000521977 KIF28PB7ZC32 967 aa11□□□□□ -0.65
SHPRH-209ENST00000521977 F5H6K3 240 aa11□□□□□ -0.65
SHPRH-209ENST00000521977 NDUFB10O96000 172 aa11□□□□□ -0.65
SHPRH-209ENST00000521977 VEGFAP15692 232 aaPredicted RBP11□□□□□ -0.65
SHPRH-209ENST00000521977 XBP1P17861 261 aa11□□□□□ -0.65
SHPRH-209ENST00000521977 PTMSP20962 102 aa11□□□□□ -0.65
SHPRH-209ENST00000521977 U2AF2P26368 475 aaKnown RBP eCLIP11□□□□□ -0.65
SHPRH-209ENST00000521977 DNM1Q05193 864 aaKnown RBP11□□□□□ -0.65
SHPRH-209ENST00000521977 KLRC3Q07444 240 aa11□□□□□ -0.65
SHPRH-209ENST00000521977 TRIM29Q14134 588 aa11□□□□□ -0.65
SHPRH-209ENST00000521977 SUPT20HL1Q3ZLR7 823 aa11□□□□□ -0.65
SHPRH-209ENST00000521977 NOL9Q5SY16 702 aaKnown RBP11□□□□□ -0.65
SHPRH-209ENST00000521977 PRAMEF18Q5VWM3 479 aa11□□□□□ -0.65
SHPRH-209ENST00000521977 BRAPQ7Z569 592 aa11□□□□□ -0.65
SHPRH-209ENST00000521977 ACER1Q8TDN7 264 aa11□□□□□ -0.65
SHPRH-209ENST00000521977 MTMR8Q96EF0 704 aa11□□□□□ -0.65
SHPRH-209ENST00000521977 SH3GLB2Q9NR46 395 aa11□□□□□ -0.65
SHPRH-209ENST00000521977 LMBRD1Q9NUN5 540 aa11□□□□□ -0.65
SHPRH-209ENST00000521977 MTMR7Q9Y216 660 aa11□□□□□ -0.65
SHPRH-209ENST00000521977 FRMPD2Q68DX3 1309 aaPredicted RBP11□□□□□ -0.65
SHPRH-209ENST00000521977 BAZ2BQ9UIF8 2168 aaKnown RBP11□□□□□ -0.65
SHPRH-209ENST00000521977 GOLGA6L22H0YM25 854 aa10.99□□□□□ -0.65
SHPRH-209ENST00000521977 INPP5BP32019 993 aa10.99□□□□□ -0.65
SHPRH-209ENST00000521977 ECE1P42892 770 aa10.99□□□□□ -0.65
SHPRH-209ENST00000521977 SLC1A4P43007 532 aa10.99□□□□□ -0.65
SHPRH-209ENST00000521977 NPY5RQ15761 445 aa10.99□□□□□ -0.65
SHPRH-209ENST00000521977 ATL3Q6DD88 541 aa10.99□□□□□ -0.65
SHPRH-209ENST00000521977 FAM173BQ6P4H8 233 aa10.99□□□□□ -0.65
SHPRH-209ENST00000521977 BTNL9Q6UXG8 535 aa10.99□□□□□ -0.65
SHPRH-209ENST00000521977 SULF1Q8IWU6 871 aa10.99□□□□□ -0.65
SHPRH-209ENST00000521977 SCYL3Q8IZE3 742 aa10.99□□□□□ -0.65
SHPRH-209ENST00000521977 KLRG1Q96E93 195 aa10.99□□□□□ -0.65
SHPRH-209ENST00000521977 UBA5Q9GZZ9 404 aa10.99□□□□□ -0.65
SHPRH-209ENST00000521977 FOXP1Q9H334 677 aaPredicted RBP10.99□□□□□ -0.65
SHPRH-209ENST00000521977 SH2D4AQ9H788 454 aa10.99□□□□□ -0.65
SHPRH-209ENST00000521977 VCPKMTQ9H867 229 aa10.99□□□□□ -0.65
SHPRH-209ENST00000521977 VPS54Q9P1Q0 977 aa10.99□□□□□ -0.65
SHPRH-209ENST00000521977 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.99□□□□□ -0.65
SHPRH-209ENST00000521977 ADM5C9JUS6 153 aa10.98□□□□□ -0.65
SHPRH-209ENST00000521977 hCG_1984214I3L0E3 225 aa10.98□□□□□ -0.65
SHPRH-209ENST00000521977 STXBP3O00186 592 aa10.98□□□□□ -0.65
SHPRH-209ENST00000521977 PLA2G6O60733 806 aa10.98□□□□□ -0.65
SHPRH-209ENST00000521977 USP2O75604 605 aaPredicted RBP10.98□□□□□ -0.65
SHPRH-209ENST00000521977 KRT85P78386 507 aa10.98□□□□□ -0.65
SHPRH-209ENST00000521977 CCDC96Q2M329 555 aa10.98□□□□□ -0.65
SHPRH-209ENST00000521977 FOXD4L6Q3SYB3 417 aaPredicted RBP10.98□□□□□ -0.65
SHPRH-209ENST00000521977 KIAA1755Q5JYT7 1200 aa10.98□□□□□ -0.65
SHPRH-209ENST00000521977 WWC2Q6AWC2 1192 aa10.98□□□□□ -0.65
SHPRH-209ENST00000521977 TTBK2Q6IQ55 1244 aa10.98□□□□□ -0.65
SHPRH-209ENST00000521977 FOXD4L3Q6VB84 417 aaPredicted RBP10.98□□□□□ -0.65
SHPRH-209ENST00000521977 KCTD1Q719H9 257 aa10.98□□□□□ -0.65
SHPRH-209ENST00000521977 USP48Q86UV5 1035 aa10.98□□□□□ -0.65
SHPRH-209ENST00000521977 PNMA8AQ86V59 439 aaPredicted RBP10.98□□□□□ -0.65
SHPRH-209ENST00000521977 DIS3L2Q8IYB7 885 aaKnown RBP10.98□□□□□ -0.65
SHPRH-209ENST00000521977 ADGRF4Q8IZF3 695 aa10.98□□□□□ -0.65
SHPRH-209ENST00000521977 ZNF713Q8N859 430 aaPredicted RBP10.98□□□□□ -0.65
SHPRH-209ENST00000521977 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.98□□□□□ -0.65
SHPRH-209ENST00000521977 RRP36Q96EU6 259 aaKnown RBP10.98□□□□□ -0.65
SHPRH-209ENST00000521977 WRNIP1Q96S55 665 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms