RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 TEX13BQ9BXU2 312 aa19.72■□□□□ 0.75
TRAM1-204ENST00000521049 SLC4A4Q9Y6R1 1079 aa19.72■□□□□ 0.75
TRAM1-204ENST00000521049 ZBED9Q6R2W3 1325 aa19.72■□□□□ 0.75
TRAM1-204ENST00000521049 DUSP11O75319 330 aaKnown RBP19.71■□□□□ 0.75
TRAM1-204ENST00000521049 ZNF467Q7Z7K2 595 aaPredicted RBP19.71■□□□□ 0.75
TRAM1-204ENST00000521049 SIRT2Q8IXJ6 389 aa19.71■□□□□ 0.75
TRAM1-204ENST00000521049 PRPF38AQ8NAV1 312 aaKnown RBP19.71■□□□□ 0.75
TRAM1-204ENST00000521049 DDX11Q96FC9 970 aa19.71■□□□□ 0.75
TRAM1-204ENST00000521049 SLF1Q9BQI6 1058 aa19.71■□□□□ 0.75
TRAM1-204ENST00000521049 ELP1O95163 1332 aa19.71■□□□□ 0.75
TRAM1-204ENST00000521049 DNAJC25-GNG10A0A024R161 153 aa19.7■□□□□ 0.74
TRAM1-204ENST00000521049 ATP2A1O14983 1001 aa19.7■□□□□ 0.74
TRAM1-204ENST00000521049 RAD21O60216 631 aa19.7■□□□□ 0.74
TRAM1-204ENST00000521049 DNAJB2P25686 324 aa19.7■□□□□ 0.74
TRAM1-204ENST00000521049 CDK7P50613 346 aa19.7■□□□□ 0.74
TRAM1-204ENST00000521049 MFSD5Q6N075 450 aa19.7■□□□□ 0.74
TRAM1-204ENST00000521049 ZSCAN25Q6NSZ9 544 aa19.7■□□□□ 0.74
TRAM1-204ENST00000521049 LENG1Q96BZ8 264 aaPredicted RBP19.7■□□□□ 0.74
TRAM1-204ENST00000521049 ZNF576Q9H609 170 aa19.7■□□□□ 0.74
TRAM1-204ENST00000521049 NYAP2Q9P242 653 aa19.7■□□□□ 0.74
TRAM1-204ENST00000521049 TBX21Q9UL17 535 aa19.7■□□□□ 0.74
TRAM1-204ENST00000521049 SYNRGQ9UMZ2 1314 aa19.7■□□□□ 0.74
TRAM1-204ENST00000521049 VCANP13611 3396 aa19.7■□□□□ 0.74
TRAM1-204ENST00000521049 F5H6K3 240 aa19.69■□□□□ 0.74
TRAM1-204ENST00000521049 CST5P28325 142 aaPredicted RBP19.69■□□□□ 0.74
TRAM1-204ENST00000521049 HNRNPUQ00839 825 aaKnown RBP eCLIP19.69■□□□□ 0.74
TRAM1-204ENST00000521049 KLRC3Q07444 240 aa19.69■□□□□ 0.74
TRAM1-204ENST00000521049 SBK1Q52WX2 424 aa19.69■□□□□ 0.74
TRAM1-204ENST00000521049 SNRNP48Q6IEG0 339 aaKnown RBP19.69■□□□□ 0.74
TRAM1-204ENST00000521049 CCDC174Q6PII3 467 aa19.69■□□□□ 0.74
TRAM1-204ENST00000521049 PCSK9Q8NBP7 692 aaKnown RBP19.69■□□□□ 0.74
TRAM1-204ENST00000521049 GLT1D1Q96MS3 346 aa19.69■□□□□ 0.74
TRAM1-204ENST00000521049 ARPP21Q9UBL0 812 aaPredicted RBP19.69■□□□□ 0.74
TRAM1-204ENST00000521049 RIPK3Q9Y572 518 aa19.69■□□□□ 0.74
TRAM1-204ENST00000521049 SMCHD1A6NHR9 2005 aa19.69■□□□□ 0.74
TRAM1-204ENST00000521049 MROH7Q68CQ1 1323 aa19.69■□□□□ 0.74
TRAM1-204ENST00000521049 EYSQ5T1H1 3165 aa19.69■□□□□ 0.74
TRAM1-204ENST00000521049 CHGBP05060 677 aa19.68■□□□□ 0.74
TRAM1-204ENST00000521049 ACVR2BQ13705 512 aa19.68■□□□□ 0.74
TRAM1-204ENST00000521049 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.68■□□□□ 0.74
TRAM1-204ENST00000521049 TIFAQ96CG3 184 aa19.68■□□□□ 0.74
TRAM1-204ENST00000521049 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.68■□□□□ 0.744e-7■■□□□ 12
TRAM1-204ENST00000521049 PUS7LQ9H0K6 701 aaKnown RBP19.68■□□□□ 0.74
TRAM1-204ENST00000521049 BCL11AQ9H165 835 aa19.68■□□□□ 0.74
TRAM1-204ENST00000521049 ZBTB40Q9NUA8 1239 aa19.68■□□□□ 0.74
TRAM1-204ENST00000521049 ZHX1Q9UKY1 873 aaPredicted RBP19.68■□□□□ 0.74
TRAM1-204ENST00000521049 ZBED4O75132 1171 aa19.67■□□□□ 0.74
TRAM1-204ENST00000521049 PPIGQ13427 754 aaKnown RBP eCLIP19.67■□□□□ 0.74
TRAM1-204ENST00000521049 TJAP1Q5JTD0 557 aa19.67■□□□□ 0.74
TRAM1-204ENST00000521049 GIMAP6Q6P9H5 292 aa19.67■□□□□ 0.74
TRAM1-204ENST00000521049 C16orf59Q7L2K0 433 aa19.67■□□□□ 0.74
TRAM1-204ENST00000521049 NUP88Q99567 741 aaPredicted RBP19.67■□□□□ 0.74
TRAM1-204ENST00000521049 ABHD16BQ9H3Z7 469 aa19.67■□□□□ 0.74
TRAM1-204ENST00000521049 MKNK2Q9HBH9 465 aa19.67■□□□□ 0.74
TRAM1-204ENST00000521049 SPC25Q9HBM1 224 aa19.67■□□□□ 0.74
TRAM1-204ENST00000521049 NDUFB10O96000 172 aa19.66■□□□□ 0.74
TRAM1-204ENST00000521049 ASGR1P07306 291 aa19.66■□□□□ 0.74
TRAM1-204ENST00000521049 RASA1P20936 1047 aa19.66■□□□□ 0.74
TRAM1-204ENST00000521049 HOXD11P31277 338 aaPredicted RBP19.66■□□□□ 0.74
TRAM1-204ENST00000521049 GJA9P57773 515 aa19.66■□□□□ 0.74
TRAM1-204ENST00000521049 TMEM240Q5SV17 173 aa19.66■□□□□ 0.74
TRAM1-204ENST00000521049 RASIP1Q5U651 963 aa19.66■□□□□ 0.74
TRAM1-204ENST00000521049 MKL1Q969V6 931 aa19.66■□□□□ 0.74
TRAM1-204ENST00000521049 STRBPQ96SI9 672 aaKnown RBP19.66■□□□□ 0.74
TRAM1-204ENST00000521049 UPF3AQ9H1J1 476 aaKnown RBP19.66■□□□□ 0.74
TRAM1-204ENST00000521049 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.66■□□□□ 0.74
TRAM1-204ENST00000521049 DDX19BQ9UMR2 479 aa19.66■□□□□ 0.74
TRAM1-204ENST00000521049 ZNFX1Q9P2E3 1918 aaKnown RBP19.66■□□□□ 0.74
TRAM1-204ENST00000521049 PRUNE2Q8WUY3 3088 aa19.66■□□□□ 0.74
TRAM1-204ENST00000521049 MYADML2A6NDP7 307 aa19.65■□□□□ 0.74
TRAM1-204ENST00000521049 ARVCFO00192 962 aa19.65■□□□□ 0.74
TRAM1-204ENST00000521049 C6orf222P0C671 652 aaPredicted RBP19.65■□□□□ 0.74
TRAM1-204ENST00000521049 CPXCR1Q8N123 301 aa19.65■□□□□ 0.74
TRAM1-204ENST00000521049 TMEM199Q8N511 208 aa19.65■□□□□ 0.74
TRAM1-204ENST00000521049 USP38Q8NB14 1042 aa19.65■□□□□ 0.74
TRAM1-204ENST00000521049 CHST13Q8NET6 341 aa19.65■□□□□ 0.74
TRAM1-204ENST00000521049 VTI1AQ96AJ9 217 aa19.65■□□□□ 0.74
TRAM1-204ENST00000521049 SLC38A10Q9HBR0 1119 aa19.65■□□□□ 0.74
TRAM1-204ENST00000521049 CLIP2Q9UDT6 1046 aa19.65■□□□□ 0.74
TRAM1-204ENST00000521049 FBXO40Q9UH90 709 aa19.65■□□□□ 0.74
TRAM1-204ENST00000521049 CTDP1Q9Y5B0 961 aaPredicted RBP19.65■□□□□ 0.74
TRAM1-204ENST00000521049 SPTBN5Q9NRC6 3674 aaKnown RBP19.64■□□□□ 0.74
TRAM1-204ENST00000521049 A0A0U1RQG5 324 aaPredicted RBP19.64■□□□□ 0.73
TRAM1-204ENST00000521049 GSG1L2A8MUP6 293 aa19.64■□□□□ 0.73
TRAM1-204ENST00000521049 OAZ1P54368 228 aa19.64■□□□□ 0.73
TRAM1-204ENST00000521049 NKX3-2P78367 333 aa19.64■□□□□ 0.73
TRAM1-204ENST00000521049 CCDC144BQ3MJ40 725 aa19.64■□□□□ 0.73
TRAM1-204ENST00000521049 GNASQ5JWF2 1037 aa19.64■□□□□ 0.73
TRAM1-204ENST00000521049 ANKRD35Q8N283 1001 aa19.64■□□□□ 0.73
TRAM1-204ENST00000521049 CHMP4BQ9H444 224 aaKnown RBP19.64■□□□□ 0.73
TRAM1-204ENST00000521049 FEM1BQ9UK73 627 aa19.64■□□□□ 0.73
TRAM1-204ENST00000521049 SYNPO2Q9UMS6 1093 aa19.64■□□□□ 0.73
TRAM1-204ENST00000521049 CDH23Q9H251 3354 aa19.63■□□□□ 0.73
TRAM1-204ENST00000521049 IGKV6D-41A0A0C4DH26 115 aa19.63■□□□□ 0.73
TRAM1-204ENST00000521049 CSF2RAP15509 400 aa19.63■□□□□ 0.73
TRAM1-204ENST00000521049 SLC4A3P48751 1232 aa19.63■□□□□ 0.73
TRAM1-204ENST00000521049 IRX5P78411 483 aaPredicted RBP19.63■□□□□ 0.73
TRAM1-204ENST00000521049 GAS2L1Q99501 681 aaPredicted RBP19.63■□□□□ 0.73
TRAM1-204ENST00000521049 PBX4Q9BYU1 374 aa19.63■□□□□ 0.73
TRAM1-204ENST00000521049 RAVER2Q9HCJ3 691 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms