RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 VPS53Q5VIR6 699 aa18.78■□□□□ 0.6
CLN8-205ENST00000520991 SLFN13Q68D06 897 aa18.78■□□□□ 0.6
CLN8-205ENST00000520991 B4GALNT3Q6L9W6 998 aa18.78■□□□□ 0.6
CLN8-205ENST00000520991 CPXCR1Q8N123 301 aa18.78■□□□□ 0.6
CLN8-205ENST00000520991 ARRDC4Q8NCT1 418 aa18.78■□□□□ 0.6
CLN8-205ENST00000520991 MYCNP04198 464 aaPredicted RBP18.77■□□□□ 0.6
CLN8-205ENST00000520991 FAM227BQ96M60 508 aa18.77■□□□□ 0.6
CLN8-205ENST00000520991 STX8Q9UNK0 236 aa18.77■□□□□ 0.6
CLN8-205ENST00000520991 DIS3Q9Y2L1 958 aaKnown RBP18.77■□□□□ 0.6
CLN8-205ENST00000520991 KBTBD13C9JR72 458 aa18.76■□□□□ 0.59
CLN8-205ENST00000520991 BMP3P12645 472 aa18.76■□□□□ 0.59
CLN8-205ENST00000520991 ZNF792Q3KQV3 632 aa18.76■□□□□ 0.59
CLN8-205ENST00000520991 MCMDC2Q4G0Z9 681 aa18.76■□□□□ 0.59
CLN8-205ENST00000520991 GJC2Q5T442 439 aaPredicted RBP18.76■□□□□ 0.59
CLN8-205ENST00000520991 SMC5Q8IY18 1101 aa18.76■□□□□ 0.59
CLN8-205ENST00000520991 RILPL2Q969X0 211 aa18.76■□□□□ 0.59
CLN8-205ENST00000520991 GDF15Q99988 308 aa18.76■□□□□ 0.59
CLN8-205ENST00000520991 TINF2Q9BSI4 451 aa18.76■□□□□ 0.59
CLN8-205ENST00000520991 RAVER2Q9HCJ3 691 aaKnown RBP18.76■□□□□ 0.59
CLN8-205ENST00000520991 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.76■□□□□ 0.59
CLN8-205ENST00000520991 ZNFX1Q9P2E3 1918 aaKnown RBP18.76■□□□□ 0.59
CLN8-205ENST00000520991 A0A0D9SFI3 127 aa18.75■□□□□ 0.59
CLN8-205ENST00000520991 ATP2A1O14983 1001 aa18.75■□□□□ 0.59
CLN8-205ENST00000520991 RANBP6O60518 1105 aaKnown RBP18.75■□□□□ 0.59
CLN8-205ENST00000520991 STAT2P52630 851 aa18.75■□□□□ 0.59
CLN8-205ENST00000520991 ATN1P54259 1190 aaPredicted RBP18.75■□□□□ 0.59
CLN8-205ENST00000520991 IKQ13123 557 aaPredicted RBP18.75■□□□□ 0.59
CLN8-205ENST00000520991 TICAM2Q86XR7 235 aa18.75■□□□□ 0.59
CLN8-205ENST00000520991 DDX11Q96FC9 970 aa18.75■□□□□ 0.59
CLN8-205ENST00000520991 SLC38A10Q9HBR0 1119 aa18.75■□□□□ 0.59
CLN8-205ENST00000520991 INCENPQ9NQS7 918 aa18.75■□□□□ 0.59
CLN8-205ENST00000520991 TOMM22Q9NS69 142 aa18.75■□□□□ 0.59
CLN8-205ENST00000520991 NRBP1Q9UHY1 535 aa18.75■□□□□ 0.59
CLN8-205ENST00000520991 ANAPC4Q9UJX5 808 aa18.75■□□□□ 0.59
CLN8-205ENST00000520991 RIPK3Q9Y572 518 aa18.75■□□□□ 0.59
CLN8-205ENST00000520991 SZT2Q5T011 3432 aa18.75■□□□□ 0.59
CLN8-205ENST00000520991 PLXNA1Q9UIW2 1896 aa18.75■□□□□ 0.59
CLN8-205ENST00000520991 TMEM232C9JQI7 657 aa18.74■□□□□ 0.59
CLN8-205ENST00000520991 BMP8BP34820 402 aa18.74■□□□□ 0.59
CLN8-205ENST00000520991 SLC1A4P43007 532 aa18.74■□□□□ 0.59
CLN8-205ENST00000520991 MAGEA10P43363 369 aaPredicted RBP18.74■□□□□ 0.59
CLN8-205ENST00000520991 ALX1Q15699 326 aa18.74■□□□□ 0.59
CLN8-205ENST00000520991 CHD1LQ86WJ1 897 aa18.74■□□□□ 0.59
CLN8-205ENST00000520991 EXOC6Q8TAG9 804 aa18.74■□□□□ 0.59
CLN8-205ENST00000520991 CHMP4CQ96CF2 233 aa18.74■□□□□ 0.59
CLN8-205ENST00000520991 GMCL1Q96IK5 515 aa18.74■□□□□ 0.59
CLN8-205ENST00000520991 RARBP10826 455 aa18.74■□□□□ 0.59
CLN8-205ENST00000520991 OAZ1P54368 228 aa18.74■□□□□ 0.59
CLN8-205ENST00000520991 NMIQ13287 307 aaPredicted RBP18.74■□□□□ 0.59
CLN8-205ENST00000520991 CHURC1Q8WUH1 139 aa18.74■□□□□ 0.59
CLN8-205ENST00000520991 FBXO40Q9UH90 709 aa18.74■□□□□ 0.59
CLN8-205ENST00000520991 CNPY2Q9Y2B0 182 aa18.74■□□□□ 0.59
CLN8-205ENST00000520991 LAMA3Q16787 3333 aa18.73■□□□□ 0.59
CLN8-205ENST00000520991 NMT2O60551 498 aa18.73■□□□□ 0.59
CLN8-205ENST00000520991 IGHDP01880 384 aa18.73■□□□□ 0.59
CLN8-205ENST00000520991 FGAP02671 866 aa18.73■□□□□ 0.59
CLN8-205ENST00000520991 FDX1P10109 184 aa18.73■□□□□ 0.59
CLN8-205ENST00000520991 MCCP23508 829 aa18.73■□□□□ 0.59
CLN8-205ENST00000520991 NUCB1Q02818 461 aa18.73■□□□□ 0.59
CLN8-205ENST00000520991 RRP12Q5JTH9 1297 aaKnown RBP18.73■□□□□ 0.59
CLN8-205ENST00000520991 ZNF589Q86UQ0 364 aaPredicted RBP18.73■□□□□ 0.59
CLN8-205ENST00000520991 FAM160B2Q86V87 743 aa18.73■□□□□ 0.59
CLN8-205ENST00000520991 ANKRD35Q8N283 1001 aa18.73■□□□□ 0.59
CLN8-205ENST00000520991 MSL3Q8N5Y2 521 aaKnown RBP18.73■□□□□ 0.59
CLN8-205ENST00000520991 XPNPEP3Q9NQH7 507 aa18.73■□□□□ 0.59
CLN8-205ENST00000520991 IL17RBQ9NRM6 502 aa18.73■□□□□ 0.59
CLN8-205ENST00000520991 CCDC171Q6TFL3 1326 aa18.72■□□□□ 0.59
CLN8-205ENST00000520991 ORC4O43929 436 aa18.72■□□□□ 0.59
CLN8-205ENST00000520991 HSPD1P10809 573 aaKnown RBP18.72■□□□□ 0.59
CLN8-205ENST00000520991 TAL1P17542 331 aaPredicted RBP18.72■□□□□ 0.59
CLN8-205ENST00000520991 RTP1P59025 263 aa18.72■□□□□ 0.59
CLN8-205ENST00000520991 LRRC41Q15345 812 aa18.72■□□□□ 0.59
CLN8-205ENST00000520991 CHST13Q8NET6 341 aa18.72■□□□□ 0.59
CLN8-205ENST00000520991 STAG1Q8WVM7 1258 aa18.72■□□□□ 0.59
CLN8-205ENST00000520991 UBE2OQ9C0C9 1292 aaKnown RBP18.72■□□□□ 0.59
CLN8-205ENST00000520991 HOMER2Q9NSB8 354 aa18.72■□□□□ 0.59
CLN8-205ENST00000520991 MTMR7Q9Y216 660 aa18.72■□□□□ 0.59
CLN8-205ENST00000520991 ATP11BQ9Y2G3 1177 aa18.72■□□□□ 0.59
CLN8-205ENST00000520991 SYNGAP1Q96PV0 1343 aa18.71■□□□□ 0.59
CLN8-205ENST00000520991 DNAJC25-GNG10A0A024R161 153 aa18.71■□□□□ 0.59
CLN8-205ENST00000520991 AKR1A1P14550 325 aa18.71■□□□□ 0.59
CLN8-205ENST00000520991 MFAP1P55081 439 aaKnown RBP18.71■□□□□ 0.59
CLN8-205ENST00000520991 KCTD1Q719H9 257 aa18.71■□□□□ 0.59
CLN8-205ENST00000520991 PLEKHM2Q8IWE5 1019 aa18.71■□□□□ 0.59
CLN8-205ENST00000520991 PRKAG2Q9UGJ0 569 aa18.71■□□□□ 0.59
CLN8-205ENST00000520991 TACC3Q9Y6A5 838 aa18.71■□□□□ 0.59
CLN8-205ENST00000520991 ZMYM6O95789 1325 aa18.7■□□□□ 0.58
CLN8-205ENST00000520991 ZNF865P0CJ78 1059 aaPredicted RBP18.7■□□□□ 0.58
CLN8-205ENST00000520991 SDSP20132 328 aa18.7■□□□□ 0.58
CLN8-205ENST00000520991 ADCYAP1R1P41586 468 aa18.7■□□□□ 0.58
CLN8-205ENST00000520991 HAND2P61296 217 aa18.7■□□□□ 0.58
CLN8-205ENST00000520991 MDM2Q00987 491 aaPredicted RBP18.7■□□□□ 0.58
CLN8-205ENST00000520991 CCDC96Q2M329 555 aa18.7■□□□□ 0.58
CLN8-205ENST00000520991 RCSD1Q6JBY9 416 aa18.7■□□□□ 0.58
CLN8-205ENST00000520991 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.7■□□□□ 0.58
CLN8-205ENST00000520991 RNF180Q86T96 592 aa18.7■□□□□ 0.58
CLN8-205ENST00000520991 TDHQ8IZJ6 230 aa18.7■□□□□ 0.58
CLN8-205ENST00000520991 FERMT2Q96AC1 680 aa18.7■□□□□ 0.58
CLN8-205ENST00000520991 LBHD1Q9BQE6 289 aaPredicted RBP18.7■□□□□ 0.58
CLN8-205ENST00000520991 ZHX1Q9UKY1 873 aaPredicted RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms