RNA–Protein interactions for RNA: ENST00000520952.1

CDH17-204, Transcript of cadherin 17, humanhuman

TSL 4

Gene CDH17, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-204ENST00000520952 KCTD2Q14681 263 aa10.93□□□□□ -0.66
CDH17-204ENST00000520952 CPXCR1Q8N123 301 aa10.93□□□□□ -0.66
CDH17-204ENST00000520952 KBTBD3Q8NAB2 608 aa10.93□□□□□ -0.66
CDH17-204ENST00000520952 CHMP4CQ96CF2 233 aa10.93□□□□□ -0.66
CDH17-204ENST00000520952 CHMP4BQ9H444 224 aaKnown RBP10.93□□□□□ -0.66
CDH17-204ENST00000520952 EPB41L4AQ9HCS5 686 aaPredicted RBP10.93□□□□□ -0.66
CDH17-204ENST00000520952 PHF24Q9UPV7 400 aa10.93□□□□□ -0.66
CDH17-204ENST00000520952 IGKV6D-41A0A0C4DH26 115 aa10.92□□□□□ -0.66
CDH17-204ENST00000520952 SNAI1O95863 264 aaPredicted RBP10.92□□□□□ -0.66
CDH17-204ENST00000520952 FAM109BQ6ICB4 259 aaPredicted RBP10.92□□□□□ -0.66
CDH17-204ENST00000520952 SNRNP48Q6IEG0 339 aaKnown RBP10.92□□□□□ -0.66
CDH17-204ENST00000520952 SEC62Q99442 399 aaKnown RBP10.92□□□□□ -0.66
CDH17-204ENST00000520952 SLF1Q9BQI6 1058 aa10.92□□□□□ -0.66
CDH17-204ENST00000520952 DCTPP1Q9H773 170 aa10.92□□□□□ -0.66
CDH17-204ENST00000520952 NYAP2Q9P242 653 aa10.92□□□□□ -0.66
CDH17-204ENST00000520952 ARPP21Q9UBL0 812 aaPredicted RBP10.92□□□□□ -0.66
CDH17-204ENST00000520952 DIS3Q9Y2L1 958 aaKnown RBP10.92□□□□□ -0.66
CDH17-204ENST00000520952 LTBP2Q14767 1821 aa10.92□□□□□ -0.66
CDH17-204ENST00000520952 VCANP13611 3396 aa10.91□□□□□ -0.66
CDH17-204ENST00000520952 PLXNA1Q9UIW2 1896 aa10.91□□□□□ -0.66
CDH17-204ENST00000520952 A0A1W2PQ45 241 aaPredicted RBP10.91□□□□□ -0.66
CDH17-204ENST00000520952 A0A1W2PQY0 241 aa10.91□□□□□ -0.66
CDH17-204ENST00000520952 GPAA1O43292 621 aa10.91□□□□□ -0.66
CDH17-204ENST00000520952 PQBP1O60828 265 aaKnown RBP10.91□□□□□ -0.66
CDH17-204ENST00000520952 APPP05067 770 aa10.91□□□□□ -0.66
CDH17-204ENST00000520952 C1orf53Q5VUE5 145 aa10.91□□□□□ -0.66
CDH17-204ENST00000520952 ZNF444Q8N0Y2 327 aaPredicted RBP10.91□□□□□ -0.66
CDH17-204ENST00000520952 OTUD7AQ8TE49 926 aaPredicted RBP10.91□□□□□ -0.66
CDH17-204ENST00000520952 APPBP2Q92624 585 aa10.91□□□□□ -0.66
CDH17-204ENST00000520952 KIFC2Q96AC6 838 aa10.91□□□□□ -0.66
CDH17-204ENST00000520952 DDX11Q96FC9 970 aa10.91□□□□□ -0.66
CDH17-204ENST00000520952 CEP95Q96GE4 821 aa10.91□□□□□ -0.66
CDH17-204ENST00000520952 SEMA6BQ9H3T3 888 aa10.91□□□□□ -0.66
CDH17-204ENST00000520952 RAVER2Q9HCJ3 691 aaKnown RBP10.91□□□□□ -0.66
CDH17-204ENST00000520952 INCENPQ9NQS7 918 aa10.91□□□□□ -0.66
CDH17-204ENST00000520952 NRBP1Q9UHY1 535 aa10.91□□□□□ -0.66
CDH17-204ENST00000520952 CDH23Q9H251 3354 aa10.91□□□□□ -0.66
CDH17-204ENST00000520952 DNAJC25-GNG10A0A024R161 153 aa10.9□□□□□ -0.66
CDH17-204ENST00000520952 MYADML2A6NDP7 307 aa10.9□□□□□ -0.66
CDH17-204ENST00000520952 PATL2C9JE40 543 aaKnown RBP10.9□□□□□ -0.66
CDH17-204ENST00000520952 ADCY6O43306 1168 aa10.9□□□□□ -0.66
CDH17-204ENST00000520952 ADAMTS4O75173 837 aa10.9□□□□□ -0.66
CDH17-204ENST00000520952 AKR1A1P14550 325 aa10.9□□□□□ -0.66
CDH17-204ENST00000520952 TDO2P48775 406 aa10.9□□□□□ -0.66
CDH17-204ENST00000520952 KCNA10Q16322 511 aa10.9□□□□□ -0.66
CDH17-204ENST00000520952 GIMAP6Q6P9H5 292 aa10.9□□□□□ -0.66
CDH17-204ENST00000520952 RNF180Q86T96 592 aa10.9□□□□□ -0.66
CDH17-204ENST00000520952 IFNL3Q8IZI9 196 aa10.9□□□□□ -0.66
CDH17-204ENST00000520952 LRRC47Q8N1G4 583 aaKnown RBP10.9□□□□□ -0.66
CDH17-204ENST00000520952 PRPF38AQ8NAV1 312 aaKnown RBP10.9□□□□□ -0.66
CDH17-204ENST00000520952 MKL1Q969V6 931 aa10.9□□□□□ -0.66
CDH17-204ENST00000520952 FGD4Q96M96 766 aa10.9□□□□□ -0.66
CDH17-204ENST00000520952 CDX2Q99626 313 aaPredicted RBP10.9□□□□□ -0.66
CDH17-204ENST00000520952 TEX13BQ9BXU2 312 aa10.9□□□□□ -0.66
CDH17-204ENST00000520952 TTYH1Q9H313 450 aaPredicted RBP10.9□□□□□ -0.66
CDH17-204ENST00000520952 MTMR4Q9NYA4 1195 aa10.9□□□□□ -0.66
CDH17-204ENST00000520952 ZHX1Q9UKY1 873 aaPredicted RBP10.9□□□□□ -0.66
CDH17-204ENST00000520952 CNPY2Q9Y2B0 182 aa10.9□□□□□ -0.66
CDH17-204ENST00000520952 TACC3Q9Y6A5 838 aa10.9□□□□□ -0.66
CDH17-204ENST00000520952 GREB1LQ9C091 1923 aaPredicted RBP10.9□□□□□ -0.67
CDH17-204ENST00000520952 KIAA0355O15063 1070 aa10.89□□□□□ -0.67
CDH17-204ENST00000520952 ZBED4O75132 1171 aa10.89□□□□□ -0.67
CDH17-204ENST00000520952 CLTBP09497 229 aa10.89□□□□□ -0.67
CDH17-204ENST00000520952 ACLYP53396 1101 aa10.89□□□□□ -0.67
CDH17-204ENST00000520952 FAAP100Q0VG06 881 aa10.89□□□□□ -0.67
CDH17-204ENST00000520952 ZNF697Q5TEC3 545 aa10.89□□□□□ -0.67
CDH17-204ENST00000520952 CCSAPQ6IQ19 270 aaPredicted RBP10.89□□□□□ -0.67
CDH17-204ENST00000520952 KLHDC9Q8NEP7 349 aa10.89□□□□□ -0.67
CDH17-204ENST00000520952 COL25A1Q9BXS0 654 aaPredicted RBP10.89□□□□□ -0.67
CDH17-204ENST00000520952 SLC38A10Q9HBR0 1119 aa10.89□□□□□ -0.67
CDH17-204ENST00000520952 TMEM39AQ9NV64 488 aa10.89□□□□□ -0.67
CDH17-204ENST00000520952 FAM184BQ9ULE4 1060 aa10.89□□□□□ -0.67
CDH17-204ENST00000520952 PCDHB15Q9Y5E8 787 aa10.89□□□□□ -0.67
CDH17-204ENST00000520952 DDX49Q9Y6V7 483 aaKnown RBP10.89□□□□□ -0.67
CDH17-204ENST00000520952 SYNRGQ9UMZ2 1314 aa10.88□□□□□ -0.67
CDH17-204ENST00000520952 RAG1P15918 1043 aa10.88□□□□□ -0.67
CDH17-204ENST00000520952 PTGS1P23219 599 aa10.88□□□□□ -0.67
CDH17-204ENST00000520952 COPB2P35606 906 aa10.88□□□□□ -0.67
CDH17-204ENST00000520952 SNAP25P60880 206 aa10.88□□□□□ -0.67
CDH17-204ENST00000520952 TFAP4Q01664 338 aa10.88□□□□□ -0.67
CDH17-204ENST00000520952 CNTN2Q02246 1040 aa10.88□□□□□ -0.67
CDH17-204ENST00000520952 ACVR2BQ13705 512 aa10.88□□□□□ -0.67
CDH17-204ENST00000520952 SLFN13Q68D06 897 aa10.88□□□□□ -0.67
CDH17-204ENST00000520952 MAMDC4Q6UXC1 1216 aa10.88□□□□□ -0.67
CDH17-204ENST00000520952 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.88□□□□□ -0.67
CDH17-204ENST00000520952 ANKRD35Q8N283 1001 aa10.88□□□□□ -0.67
CDH17-204ENST00000520952 MYLIPQ8WY64 445 aa10.88□□□□□ -0.67
CDH17-204ENST00000520952 GPATCH3Q96I76 525 aa10.88□□□□□ -0.67
CDH17-204ENST00000520952 TSEN34Q9BSV6 310 aaKnown RBP10.88□□□□□ -0.67
CDH17-204ENST00000520952 HOMER2Q9NSB8 354 aa10.88□□□□□ -0.67
CDH17-204ENST00000520952 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.88□□□□□ -0.67
CDH17-204ENST00000520952 FEM1BQ9UK73 627 aa10.88□□□□□ -0.67
CDH17-204ENST00000520952 CTDP1Q9Y5B0 961 aaPredicted RBP10.88□□□□□ -0.67
CDH17-204ENST00000520952 MCM3APO60318 1980 aa10.88□□□□□ -0.67
CDH17-204ENST00000520952 ROBO3Q96MS0 1386 aa10.88□□□□□ -0.67
CDH17-204ENST00000520952 MYH4Q9Y623 1939 aa10.88□□□□□ -0.67
CDH17-204ENST00000520952 SYNGAP1Q96PV0 1343 aa10.87□□□□□ -0.67
CDH17-204ENST00000520952 TMEM232C9JQI7 657 aa10.87□□□□□ -0.67
CDH17-204ENST00000520952 ATP2A1O14983 1001 aa10.87□□□□□ -0.67
CDH17-204ENST00000520952 DUSP11O75319 330 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms