RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 IGKV6D-41A0A0C4DH26 115 aa19.13■□□□□ 0.65
IGHV3-42-201ENST00000520410 TMEM232C9JQI7 657 aa19.13■□□□□ 0.65
IGHV3-42-201ENST00000520410 AAMPQ13685 434 aa19.13■□□□□ 0.65
IGHV3-42-201ENST00000520410 PPP4R3BQ5MIZ7 849 aa19.13■□□□□ 0.65
IGHV3-42-201ENST00000520410 ARRDC4Q8NCT1 418 aa19.13■□□□□ 0.65
IGHV3-42-201ENST00000520410 PCDH10Q9P2E7 1040 aa19.13■□□□□ 0.65
IGHV3-42-201ENST00000520410 ADAMTS5Q9UNA0 930 aa19.13■□□□□ 0.65
IGHV3-42-201ENST00000520410 ALPK3Q96L96 1907 aa19.13■□□□□ 0.65
IGHV3-42-201ENST00000520410 A0A0D9SFI3 127 aa19.12■□□□□ 0.65
IGHV3-42-201ENST00000520410 DNM1LO00429 736 aa19.12■□□□□ 0.65
IGHV3-42-201ENST00000520410 SEPT4O43236 478 aa19.12■□□□□ 0.65
IGHV3-42-201ENST00000520410 SLC1A4P43007 532 aa19.12■□□□□ 0.65
IGHV3-42-201ENST00000520410 NMIQ13287 307 aaPredicted RBP19.12■□□□□ 0.65
IGHV3-42-201ENST00000520410 CCDC96Q2M329 555 aa19.12■□□□□ 0.65
IGHV3-42-201ENST00000520410 MCMDC2Q4G0Z9 681 aa19.12■□□□□ 0.65
IGHV3-42-201ENST00000520410 ANKRD35Q8N283 1001 aa19.12■□□□□ 0.65
IGHV3-42-201ENST00000520410 GMCL1P1Q8NEA9 526 aa19.12■□□□□ 0.65
IGHV3-42-201ENST00000520410 INCENPQ9NQS7 918 aa19.12■□□□□ 0.65
IGHV3-42-201ENST00000520410 PRKAG2Q9UGJ0 569 aa19.12■□□□□ 0.65
IGHV3-42-201ENST00000520410 CNPY2Q9Y2B0 182 aa19.12■□□□□ 0.65
IGHV3-42-201ENST00000520410 ATP11BQ9Y2G3 1177 aa19.12■□□□□ 0.65
IGHV3-42-201ENST00000520410 PLIN4Q96Q06 1357 aa19.11■□□□□ 0.65
IGHV3-42-201ENST00000520410 COL6A1P12109 1028 aa19.11■□□□□ 0.65
IGHV3-42-201ENST00000520410 MCCP23508 829 aa19.11■□□□□ 0.65
IGHV3-42-201ENST00000520410 STAT2P52630 851 aa19.11■□□□□ 0.65
IGHV3-42-201ENST00000520410 REPS2Q8NFH8 660 aa19.11■□□□□ 0.65
IGHV3-42-201ENST00000520410 TINF2Q9BSI4 451 aa19.11■□□□□ 0.65
IGHV3-42-201ENST00000520410 UBE2OQ9C0C9 1292 aaKnown RBP19.11■□□□□ 0.65
IGHV3-42-201ENST00000520410 ZHX1Q9UKY1 873 aaPredicted RBP19.11■□□□□ 0.65
IGHV3-42-201ENST00000520410 NMT2O60551 498 aa19.1■□□□□ 0.65
IGHV3-42-201ENST00000520410 RARBP10826 455 aa19.1■□□□□ 0.65
IGHV3-42-201ENST00000520410 MAGEA10P43363 369 aaPredicted RBP19.1■□□□□ 0.65
IGHV3-42-201ENST00000520410 HAND2P61296 217 aa19.1■□□□□ 0.65
IGHV3-42-201ENST00000520410 MDM2Q00987 491 aaPredicted RBP19.1■□□□□ 0.65
IGHV3-42-201ENST00000520410 CCDC174Q6PII3 467 aa19.1■□□□□ 0.65
IGHV3-42-201ENST00000520410 KCTD1Q719H9 257 aa19.1■□□□□ 0.65
IGHV3-42-201ENST00000520410 CHD1LQ86WJ1 897 aa19.1■□□□□ 0.65
IGHV3-42-201ENST00000520410 MKL1Q969V6 931 aa19.1■□□□□ 0.65
IGHV3-42-201ENST00000520410 FERMT2Q96AC1 680 aa19.1■□□□□ 0.65
IGHV3-42-201ENST00000520410 XPNPEP3Q9NQH7 507 aa19.1■□□□□ 0.65
IGHV3-42-201ENST00000520410 PRDM5Q9NQX1 630 aaPredicted RBP19.1■□□□□ 0.65
IGHV3-42-201ENST00000520410 RIPK3Q9Y572 518 aa19.1■□□□□ 0.65
IGHV3-42-201ENST00000520410 RTP1P59025 263 aa19.09■□□□□ 0.65
IGHV3-42-201ENST00000520410 ZNF792Q3KQV3 632 aa19.09■□□□□ 0.65
IGHV3-42-201ENST00000520410 FAM160B2Q86V87 743 aa19.09■□□□□ 0.65
IGHV3-42-201ENST00000520410 CHURC1Q8WUH1 139 aa19.09■□□□□ 0.65
IGHV3-42-201ENST00000520410 LBHD1Q9BQE6 289 aaPredicted RBP19.09■□□□□ 0.65
IGHV3-42-201ENST00000520410 DIAPH3Q9NSV4 1193 aa19.09■□□□□ 0.65
IGHV3-42-201ENST00000520410 SYNPO2Q9UMS6 1093 aa19.09■□□□□ 0.65
IGHV3-42-201ENST00000520410 CCDC171Q6TFL3 1326 aa19.08■□□□□ 0.65
IGHV3-42-201ENST00000520410 FOXP2O15409 715 aa19.08■□□□□ 0.64
IGHV3-42-201ENST00000520410 IGHDP01880 384 aa19.08■□□□□ 0.64
IGHV3-42-201ENST00000520410 MFAP1P55081 439 aaKnown RBP19.08■□□□□ 0.64
IGHV3-42-201ENST00000520410 SLC38A10Q9HBR0 1119 aa19.08■□□□□ 0.64
IGHV3-42-201ENST00000520410 FBXO40Q9UH90 709 aa19.08■□□□□ 0.64
IGHV3-42-201ENST00000520410 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.08■□□□□ 0.64
IGHV3-42-201ENST00000520410 A0A1W2PPC1 479 aa19.07■□□□□ 0.64
IGHV3-42-201ENST00000520410 ALAS1P13196 640 aa19.07■□□□□ 0.64
IGHV3-42-201ENST00000520410 AKR1A1P14550 325 aa19.07■□□□□ 0.64
IGHV3-42-201ENST00000520410 TAL1P17542 331 aaPredicted RBP19.07■□□□□ 0.64
IGHV3-42-201ENST00000520410 ADCYAP1R1P41586 468 aa19.07■□□□□ 0.64
IGHV3-42-201ENST00000520410 SNAP25P60880 206 aa19.07■□□□□ 0.64
IGHV3-42-201ENST00000520410 RASGRP2Q7LDG7 609 aa19.07■□□□□ 0.64
IGHV3-42-201ENST00000520410 RNF180Q86T96 592 aa19.07■□□□□ 0.64
IGHV3-42-201ENST00000520410 ZNF589Q86UQ0 364 aaPredicted RBP19.07■□□□□ 0.64
IGHV3-42-201ENST00000520410 SMC5Q8IY18 1101 aa19.07■□□□□ 0.64
IGHV3-42-201ENST00000520410 LENG1Q96BZ8 264 aaPredicted RBP19.07■□□□□ 0.64
IGHV3-42-201ENST00000520410 DIS3Q9Y2L1 958 aaKnown RBP19.07■□□□□ 0.64
IGHV3-42-201ENST00000520410 SUPT16HQ9Y5B9 1047 aaKnown RBP19.07■□□□□ 0.64
IGHV3-42-201ENST00000520410 PGK1P00558 417 aa19.06■□□□□ 0.64
IGHV3-42-201ENST00000520410 FGAP02671 866 aa19.06■□□□□ 0.64
IGHV3-42-201ENST00000520410 HSPD1P10809 573 aaKnown RBP19.06■□□□□ 0.64
IGHV3-42-201ENST00000520410 IRX6P78412 446 aaPredicted RBP19.06■□□□□ 0.64
IGHV3-42-201ENST00000520410 LRRC41Q15345 812 aa19.06■□□□□ 0.64
IGHV3-42-201ENST00000520410 CWC27Q6UX04 472 aaKnown RBP19.06■□□□□ 0.64
IGHV3-42-201ENST00000520410 CHST13Q8NET6 341 aa19.06■□□□□ 0.64
IGHV3-42-201ENST00000520410 STAG1Q8WVM7 1258 aa19.06■□□□□ 0.64
IGHV3-42-201ENST00000520410 GMCL1Q96IK5 515 aa19.06■□□□□ 0.64
IGHV3-42-201ENST00000520410 GDF15Q99988 308 aa19.06■□□□□ 0.64
IGHV3-42-201ENST00000520410 PRO3102Q9H379 93 aa19.06■□□□□ 0.64
IGHV3-42-201ENST00000520410 ACAD9Q9H845 621 aa19.06■□□□□ 0.64
IGHV3-42-201ENST00000520410 RNF146Q9NTX7 359 aa19.06■□□□□ 0.64
IGHV3-42-201ENST00000520410 NRBP1Q9UHY1 535 aa19.06■□□□□ 0.64
IGHV3-42-201ENST00000520410 PLXNA1Q9UIW2 1896 aa19.05■□□□□ 0.64
IGHV3-42-201ENST00000520410 FDX1P10109 184 aa19.05■□□□□ 0.64
IGHV3-42-201ENST00000520410 SDSP20132 328 aa19.05■□□□□ 0.64
IGHV3-42-201ENST00000520410 OAZ1P54368 228 aa19.05■□□□□ 0.64
IGHV3-42-201ENST00000520410 NUCB1Q02818 461 aa19.05■□□□□ 0.64
IGHV3-42-201ENST00000520410 MFSD6Q6ZSS7 791 aa19.05■□□□□ 0.64
IGHV3-42-201ENST00000520410 AGBL1Q96MI9 1066 aa19.05■□□□□ 0.64
IGHV3-42-201ENST00000520410 IL17RBQ9NRM6 502 aa19.05■□□□□ 0.64
IGHV3-42-201ENST00000520410 ANAPC4Q9UJX5 808 aa19.05■□□□□ 0.64
IGHV3-42-201ENST00000520410 FRMPD2Q68DX3 1309 aaPredicted RBP19.04■□□□□ 0.64
IGHV3-42-201ENST00000520410 POTEB2H3BUK9 544 aa19.04■□□□□ 0.64
IGHV3-42-201ENST00000520410 ATP2A1O14983 1001 aa19.04■□□□□ 0.64
IGHV3-42-201ENST00000520410 ORC4O43929 436 aa19.04■□□□□ 0.64
IGHV3-42-201ENST00000520410 ALX1Q15699 326 aa19.04■□□□□ 0.64
IGHV3-42-201ENST00000520410 TRIM60Q495X7 471 aa19.04■□□□□ 0.64
IGHV3-42-201ENST00000520410 RCSD1Q6JBY9 416 aa19.04■□□□□ 0.64
IGHV3-42-201ENST00000520410 SLC39A5Q6ZMH5 540 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms