RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 MSL3Q8N5Y2 521 aaKnown RBP30.04■■■□□ 2.4
VEGFA-220ENST00000519767 KIFC2Q96AC6 838 aa30.04■■■□□ 2.4
VEGFA-220ENST00000519767 DDX11Q96FC9 970 aa30.04■■■□□ 2.4
VEGFA-220ENST00000519767 SLC38A10Q9HBR0 1119 aa30.04■■■□□ 2.4
VEGFA-220ENST00000519767 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.04■■■□□ 2.42e-6■□□□□ 9
VEGFA-220ENST00000519767 DNAH12Q6ZR08 3092 aa30.04■■■□□ 2.4
VEGFA-220ENST00000519767 OAZ1P54368 228 aa30.03■■■□□ 2.4
VEGFA-220ENST00000519767 LRRC47Q8N1G4 583 aaKnown RBP30.03■■■□□ 2.4
VEGFA-220ENST00000519767 CHURC1Q8WUH1 139 aa30.03■■■□□ 2.4
VEGFA-220ENST00000519767 GMCL1Q96IK5 515 aa30.03■■■□□ 2.4
VEGFA-220ENST00000519767 LNPKQ9C0E8 428 aa30.03■■■□□ 2.4
VEGFA-220ENST00000519767 PARP14Q460N5 1801 aa30.02■■■□□ 2.4
VEGFA-220ENST00000519767 TSPY2A6NKD2 308 aa30.02■■■□□ 2.4
VEGFA-220ENST00000519767 KBTBD13C9JR72 458 aa30.02■■■□□ 2.4
VEGFA-220ENST00000519767 SYN1P17600 705 aa30.02■■■□□ 2.4
VEGFA-220ENST00000519767 CTDSPL2Q05D32 466 aa30.02■■■□□ 2.4
VEGFA-220ENST00000519767 CPXCR1Q8N123 301 aa30.02■■■□□ 2.4
VEGFA-220ENST00000519767 FBXO40Q9UH90 709 aa30.02■■■□□ 2.4
VEGFA-220ENST00000519767 GJC2Q5T442 439 aaPredicted RBP30.01■■■□□ 2.39
VEGFA-220ENST00000519767 VPS53Q5VIR6 699 aa30.01■■■□□ 2.39
VEGFA-220ENST00000519767 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.01■■■□□ 2.395e-6■□□□□ 9.9
VEGFA-220ENST00000519767 RIPK3Q9Y572 518 aa30.01■■■□□ 2.39
VEGFA-220ENST00000519767 TRIM6-TRIM34B2RNG4 842 aa30■■■□□ 2.39
VEGFA-220ENST00000519767 ORC4O43929 436 aa30■■■□□ 2.39
VEGFA-220ENST00000519767 FGRP09769 529 aa30■■■□□ 2.39
VEGFA-220ENST00000519767 MAGEA10P43363 369 aaPredicted RBP30■■■□□ 2.39
VEGFA-220ENST00000519767 FAM160B2Q86V87 743 aa30■■■□□ 2.39
VEGFA-220ENST00000519767 CHST13Q8NET6 341 aa30■■■□□ 2.39
VEGFA-220ENST00000519767 STX8Q9UNK0 236 aa30■■■□□ 2.39
VEGFA-220ENST00000519767 CNPY2Q9Y2B0 182 aa30■■■□□ 2.39
VEGFA-220ENST00000519767 ALPK3Q96L96 1907 aa30■■■□□ 2.39
VEGFA-220ENST00000519767 TMEM232C9JQI7 657 aa29.99■■■□□ 2.39
VEGFA-220ENST00000519767 RANBP6O60518 1105 aaKnown RBP29.99■■■□□ 2.39
VEGFA-220ENST00000519767 PLA2G6O60733 806 aa29.99■■■□□ 2.39
VEGFA-220ENST00000519767 SLC1A4P43007 532 aa29.99■■■□□ 2.39
VEGFA-220ENST00000519767 SLC4A3P48751 1232 aa29.99■■■□□ 2.39
VEGFA-220ENST00000519767 STAT2P52630 851 aa29.99■■■□□ 2.39
VEGFA-220ENST00000519767 ANO1Q5XXA6 986 aa29.99■■■□□ 2.39
VEGFA-220ENST00000519767 B4GALNT3Q6L9W6 998 aa29.99■■■□□ 2.39
VEGFA-220ENST00000519767 CHD1LQ86WJ1 897 aa29.99■■■□□ 2.39
VEGFA-220ENST00000519767 STAG1Q8WVM7 1258 aa29.99■■■□□ 2.39
VEGFA-220ENST00000519767 FAM227BQ96M60 508 aa29.99■■■□□ 2.39
VEGFA-220ENST00000519767 RAVER2Q9HCJ3 691 aaKnown RBP29.99■■■□□ 2.39
VEGFA-220ENST00000519767 DNAJC25-GNG10A0A024R161 153 aa29.98■■■□□ 2.39
VEGFA-220ENST00000519767 FGAP02671 866 aa29.98■■■□□ 2.39
VEGFA-220ENST00000519767 RARBP10826 455 aa29.98■■■□□ 2.39
VEGFA-220ENST00000519767 INCENPQ9NQS7 918 aa29.98■■■□□ 2.39
VEGFA-220ENST00000519767 IL17RBQ9NRM6 502 aa29.98■■■□□ 2.39
VEGFA-220ENST00000519767 MCCP23508 829 aa29.97■■■□□ 2.39
VEGFA-220ENST00000519767 ATN1P54259 1190 aaPredicted RBP29.97■■■□□ 2.39
VEGFA-220ENST00000519767 MFAP1P55081 439 aaKnown RBP29.97■■■□□ 2.39
VEGFA-220ENST00000519767 NUCB1Q02818 461 aa29.97■■■□□ 2.39
VEGFA-220ENST00000519767 RCSD1Q6JBY9 416 aa29.97■■■□□ 2.39
VEGFA-220ENST00000519767 MAMDC4Q6UXC1 1216 aa29.97■■■□□ 2.39
VEGFA-220ENST00000519767 ZNF467Q7Z7K2 595 aaPredicted RBP29.97■■■□□ 2.39
VEGFA-220ENST00000519767 ANKRD35Q8N283 1001 aa29.97■■■□□ 2.39
VEGFA-220ENST00000519767 RILPL2Q969X0 211 aa29.97■■■□□ 2.39
VEGFA-220ENST00000519767 OSBPL3Q9H4L5 887 aa29.97■■■□□ 2.39
VEGFA-220ENST00000519767 ISY1Q9ULR0 285 aaKnown RBP29.97■■■□□ 2.39
VEGFA-220ENST00000519767 SYNGAP1Q96PV0 1343 aa29.96■■■□□ 2.39
VEGFA-220ENST00000519767 COL11A1P12107 1806 aaPredicted RBP29.96■■■□□ 2.39
VEGFA-220ENST00000519767 ZNFX1Q9P2E3 1918 aaKnown RBP29.96■■■□□ 2.39
VEGFA-220ENST00000519767 A0A0D9SFI3 127 aa29.96■■■□□ 2.39
VEGFA-220ENST00000519767 LRRC41Q15345 812 aa29.96■■■□□ 2.39
VEGFA-220ENST00000519767 UBE2OQ9C0C9 1292 aaKnown RBP29.96■■■□□ 2.39
VEGFA-220ENST00000519767 IGHDP01880 384 aa29.95■■■□□ 2.39
VEGFA-220ENST00000519767 MYCNP04198 464 aaPredicted RBP29.95■■■□□ 2.39
VEGFA-220ENST00000519767 ZNF865P0CJ78 1059 aaPredicted RBP29.95■■■□□ 2.39
VEGFA-220ENST00000519767 HSPD1P10809 573 aaKnown RBP29.95■■■□□ 2.39
VEGFA-220ENST00000519767 AKR1A1P14550 325 aa29.95■■■□□ 2.39
VEGFA-220ENST00000519767 NOVP48745 357 aa29.95■■■□□ 2.39
VEGFA-220ENST00000519767 IKQ13123 557 aaPredicted RBP29.95■■■□□ 2.39
VEGFA-220ENST00000519767 NMIQ13287 307 aaPredicted RBP29.95■■■□□ 2.39
VEGFA-220ENST00000519767 SLC39A5Q6ZMH5 540 aa29.95■■■□□ 2.39
VEGFA-220ENST00000519767 XPNPEP3Q9NQH7 507 aa29.95■■■□□ 2.39
VEGFA-220ENST00000519767 ZMYM6O95789 1325 aa29.95■■■□□ 2.38
VEGFA-220ENST00000519767 RNF180Q86T96 592 aa29.94■■■□□ 2.38
VEGFA-220ENST00000519767 PLEKHM2Q8IWE5 1019 aa29.94■■■□□ 2.38
VEGFA-220ENST00000519767 EXOC6Q8TAG9 804 aa29.94■■■□□ 2.38
VEGFA-220ENST00000519767 PRKAG2Q9UGJ0 569 aa29.94■■■□□ 2.38
VEGFA-220ENST00000519767 MYH4Q9Y623 1939 aa29.93■■■□□ 2.38
VEGFA-220ENST00000519767 NMT2O60551 498 aa29.93■■■□□ 2.38
VEGFA-220ENST00000519767 PCP11498 1178 aaKnown RBP29.93■■■□□ 2.38
VEGFA-220ENST00000519767 TAL1P17542 331 aaPredicted RBP29.93■■■□□ 2.38
VEGFA-220ENST00000519767 ADCYAP1R1P41586 468 aa29.93■■■□□ 2.38
VEGFA-220ENST00000519767 RTP1P59025 263 aa29.93■■■□□ 2.38
VEGFA-220ENST00000519767 TKFCQ3LXA3 575 aa29.93■■■□□ 2.38
VEGFA-220ENST00000519767 TDHQ8IZJ6 230 aa29.93■■■□□ 2.38
VEGFA-220ENST00000519767 TOMM22Q9NS69 142 aa29.93■■■□□ 2.38
VEGFA-220ENST00000519767 TCP11L1Q9NUJ3 509 aa29.93■■■□□ 2.38
VEGFA-220ENST00000519767 FAM184BQ9ULE4 1060 aa29.93■■■□□ 2.38
VEGFA-220ENST00000519767 SDSP20132 328 aa29.92■■■□□ 2.38
VEGFA-220ENST00000519767 LBHD1Q9BQE6 289 aaPredicted RBP29.92■■■□□ 2.38
VEGFA-220ENST00000519767 TACC3Q9Y6A5 838 aa29.92■■■□□ 2.38
VEGFA-220ENST00000519767 CCDC171Q6TFL3 1326 aa29.92■■■□□ 2.38
VEGFA-220ENST00000519767 SZT2Q5T011 3432 aa29.92■■■□□ 2.38
VEGFA-220ENST00000519767 SNAI1O95863 264 aaPredicted RBP29.91■■■□□ 2.38
VEGFA-220ENST00000519767 LRIT3Q3SXY7 679 aa29.91■■■□□ 2.38
VEGFA-220ENST00000519767 C1orf53Q5VUE5 145 aa29.91■■■□□ 2.38
VEGFA-220ENST00000519767 ACAD9Q9H845 621 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms