RNA–Protein interactions for RNA: ENST00000519577.5

RUNX1T1-220, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 4

Gene RUNX1T1, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-220ENST00000519577 RIPK3Q9Y572 518 aa17.88■□□□□ 0.45
RUNX1T1-220ENST00000519577 CTDP1Q9Y5B0 961 aaPredicted RBP17.88■□□□□ 0.45
RUNX1T1-220ENST00000519577 SALL3Q9BXA9 1300 aa17.88■□□□□ 0.45
RUNX1T1-220ENST00000519577 PLIN4Q96Q06 1357 aa17.88■□□□□ 0.45
RUNX1T1-220ENST00000519577 LTBP2Q14767 1821 aa17.87■□□□□ 0.45
RUNX1T1-220ENST00000519577 SLC3A2P08195 630 aaKnown RBP17.87■□□□□ 0.45
RUNX1T1-220ENST00000519577 ADCYAP1R1P41586 468 aa17.87■□□□□ 0.45
RUNX1T1-220ENST00000519577 TFAP4Q01664 338 aa17.87■□□□□ 0.45
RUNX1T1-220ENST00000519577 PDE4BQ07343 736 aa17.87■□□□□ 0.45
RUNX1T1-220ENST00000519577 SLFN13Q68D06 897 aa17.87■□□□□ 0.45
RUNX1T1-220ENST00000519577 PRPF38AQ8NAV1 312 aaKnown RBP17.87■□□□□ 0.45
RUNX1T1-220ENST00000519577 NEDD1Q8NHV4 660 aa17.87■□□□□ 0.45
RUNX1T1-220ENST00000519577 MKL1Q969V6 931 aa17.87■□□□□ 0.45
RUNX1T1-220ENST00000519577 LENG1Q96BZ8 264 aaPredicted RBP17.87■□□□□ 0.45
RUNX1T1-220ENST00000519577 CHMP4CQ96CF2 233 aa17.87■□□□□ 0.45
RUNX1T1-220ENST00000519577 LBHD1Q9BQE6 289 aaPredicted RBP17.87■□□□□ 0.45
RUNX1T1-220ENST00000519577 RAVER2Q9HCJ3 691 aaKnown RBP17.87■□□□□ 0.45
RUNX1T1-220ENST00000519577 DIS3Q9Y2L1 958 aaKnown RBP17.87■□□□□ 0.45
RUNX1T1-220ENST00000519577 MCM3APO60318 1980 aa17.87■□□□□ 0.45
RUNX1T1-220ENST00000519577 ZBED4O75132 1171 aa17.86■□□□□ 0.45
RUNX1T1-220ENST00000519577 RARBP10826 455 aa17.86■□□□□ 0.45
RUNX1T1-220ENST00000519577 LRIT3Q3SXY7 679 aa17.86■□□□□ 0.45
RUNX1T1-220ENST00000519577 TRIM60Q495X7 471 aa17.86■□□□□ 0.45
RUNX1T1-220ENST00000519577 SLC39A5Q6ZMH5 540 aa17.86■□□□□ 0.45
RUNX1T1-220ENST00000519577 DDX11Q96FC9 970 aa17.86■□□□□ 0.45
RUNX1T1-220ENST00000519577 XPNPEP3Q9NQH7 507 aa17.86■□□□□ 0.45
RUNX1T1-220ENST00000519577 PRKAG2Q9UGJ0 569 aa17.86■□□□□ 0.45
RUNX1T1-220ENST00000519577 NRBP1Q9UHY1 535 aa17.86■□□□□ 0.45
RUNX1T1-220ENST00000519577 FEM1BQ9UK73 627 aa17.86■□□□□ 0.45
RUNX1T1-220ENST00000519577 FOXP2O15409 715 aa17.85■□□□□ 0.45
RUNX1T1-220ENST00000519577 PGK1P00558 417 aa17.85■□□□□ 0.45
RUNX1T1-220ENST00000519577 CTDSPL2Q05D32 466 aa17.85■□□□□ 0.45
RUNX1T1-220ENST00000519577 GMCL1P1Q8NEA9 526 aa17.85■□□□□ 0.45
RUNX1T1-220ENST00000519577 SLC38A10Q9HBR0 1119 aa17.85■□□□□ 0.45
RUNX1T1-220ENST00000519577 PRDM5Q9NQX1 630 aaPredicted RBP17.85■□□□□ 0.45
RUNX1T1-220ENST00000519577 ATP2A1O14983 1001 aa17.84■□□□□ 0.45
RUNX1T1-220ENST00000519577 ZNF865P0CJ78 1059 aaPredicted RBP17.84■□□□□ 0.45
RUNX1T1-220ENST00000519577 BMP3P12645 472 aa17.84■□□□□ 0.45
RUNX1T1-220ENST00000519577 VPS53Q5VIR6 699 aa17.84■□□□□ 0.45
RUNX1T1-220ENST00000519577 Q7L0L9 218 aa17.84■□□□□ 0.45
RUNX1T1-220ENST00000519577 INCENPQ9NQS7 918 aa17.84■□□□□ 0.45
RUNX1T1-220ENST00000519577 SYNPO2Q9UMS6 1093 aa17.84■□□□□ 0.45
RUNX1T1-220ENST00000519577 CNPY2Q9Y2B0 182 aa17.84■□□□□ 0.45
RUNX1T1-220ENST00000519577 DNAJC25-GNG10A0A024R161 153 aa17.83■□□□□ 0.44
RUNX1T1-220ENST00000519577 AKR1A1P14550 325 aa17.83■□□□□ 0.44
RUNX1T1-220ENST00000519577 SNX17Q15036 470 aa17.83■□□□□ 0.44
RUNX1T1-220ENST00000519577 RNF180Q86T96 592 aa17.83■□□□□ 0.44
RUNX1T1-220ENST00000519577 DEFB123Q8N688 67 aa17.83■□□□□ 0.44
RUNX1T1-220ENST00000519577 EVI5LQ96CN4 794 aa17.83■□□□□ 0.44
RUNX1T1-220ENST00000519577 HOMER2Q9NSB8 354 aa17.83■□□□□ 0.44
RUNX1T1-220ENST00000519577 ZHX1Q9UKY1 873 aaPredicted RBP17.83■□□□□ 0.44
RUNX1T1-220ENST00000519577 PHF24Q9UPV7 400 aa17.83■□□□□ 0.44
RUNX1T1-220ENST00000519577 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.83■□□□□ 0.44
RUNX1T1-220ENST00000519577 TSPY2A6NKD2 308 aa17.82■□□□□ 0.44
RUNX1T1-220ENST00000519577 TMEM232C9JQI7 657 aa17.82■□□□□ 0.44
RUNX1T1-220ENST00000519577 NMT2O60551 498 aa17.82■□□□□ 0.44
RUNX1T1-220ENST00000519577 PDE1AP54750 535 aa17.82■□□□□ 0.44
RUNX1T1-220ENST00000519577 IKQ13123 557 aaPredicted RBP17.82■□□□□ 0.44
RUNX1T1-220ENST00000519577 HDAC1Q13547 482 aaPredicted RBP17.82■□□□□ 0.44
RUNX1T1-220ENST00000519577 ANKRD35Q8N283 1001 aa17.82■□□□□ 0.44
RUNX1T1-220ENST00000519577 YTHDC1Q96MU7 727 aaKnown RBP17.82■□□□□ 0.44
RUNX1T1-220ENST00000519577 STX8Q9UNK0 236 aa17.82■□□□□ 0.44
RUNX1T1-220ENST00000519577 TACC3Q9Y6A5 838 aa17.82■□□□□ 0.44
RUNX1T1-220ENST00000519577 SYNGAP1Q96PV0 1343 aa17.81■□□□□ 0.44
RUNX1T1-220ENST00000519577 SNAI1O95863 264 aaPredicted RBP17.81■□□□□ 0.44
RUNX1T1-220ENST00000519577 MCCP23508 829 aa17.81■□□□□ 0.44
RUNX1T1-220ENST00000519577 SLC1A4P43007 532 aa17.81■□□□□ 0.44
RUNX1T1-220ENST00000519577 GPR153Q6NV75 609 aa17.81■□□□□ 0.44
RUNX1T1-220ENST00000519577 RASGRP2Q7LDG7 609 aa17.81■□□□□ 0.44
RUNX1T1-220ENST00000519577 MSL3Q8N5Y2 521 aaKnown RBP17.81■□□□□ 0.44
RUNX1T1-220ENST00000519577 CHST13Q8NET6 341 aa17.81■□□□□ 0.44
RUNX1T1-220ENST00000519577 FGD4Q96M96 766 aa17.81■□□□□ 0.44
RUNX1T1-220ENST00000519577 PDLIM7Q9NR12 457 aa17.81■□□□□ 0.44
RUNX1T1-220ENST00000519577 MTMR7Q9Y216 660 aa17.81■□□□□ 0.44
RUNX1T1-220ENST00000519577 A0A0D9SFI3 127 aa17.8■□□□□ 0.44
RUNX1T1-220ENST00000519577 RANBP6O60518 1105 aaKnown RBP17.8■□□□□ 0.44
RUNX1T1-220ENST00000519577 ADAMTS4O75173 837 aa17.8■□□□□ 0.44
RUNX1T1-220ENST00000519577 STAT2P52630 851 aa17.8■□□□□ 0.44
RUNX1T1-220ENST00000519577 OAZ1P54368 228 aa17.8■□□□□ 0.44
RUNX1T1-220ENST00000519577 TLE2Q04725 743 aa17.8■□□□□ 0.44
RUNX1T1-220ENST00000519577 MAMDC4Q6UXC1 1216 aa17.8■□□□□ 0.44
RUNX1T1-220ENST00000519577 KCTD1Q719H9 257 aa17.8■□□□□ 0.44
RUNX1T1-220ENST00000519577 SH3RF1Q7Z6J0 888 aa17.8■□□□□ 0.44
RUNX1T1-220ENST00000519577 BADQ92934 168 aa17.8■□□□□ 0.44
RUNX1T1-220ENST00000519577 GMCL1Q96IK5 515 aa17.8■□□□□ 0.44
RUNX1T1-220ENST00000519577 FAM227BQ96M60 508 aa17.8■□□□□ 0.44
RUNX1T1-220ENST00000519577 LNPKQ9C0E8 428 aa17.8■□□□□ 0.44
RUNX1T1-220ENST00000519577 IL17RBQ9NRM6 502 aa17.8■□□□□ 0.44
RUNX1T1-220ENST00000519577 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.8■□□□□ 0.44
RUNX1T1-220ENST00000519577 FBXO40Q9UH90 709 aa17.8■□□□□ 0.44
RUNX1T1-220ENST00000519577 FAM184BQ9ULE4 1060 aa17.8■□□□□ 0.44
RUNX1T1-220ENST00000519577 SYNRGQ9UMZ2 1314 aa17.79■□□□□ 0.44
RUNX1T1-220ENST00000519577 A0A1W2PQ45 241 aaPredicted RBP17.79■□□□□ 0.44
RUNX1T1-220ENST00000519577 A0A1W2PQY0 241 aa17.79■□□□□ 0.44
RUNX1T1-220ENST00000519577 SNAP25P60880 206 aa17.79■□□□□ 0.44
RUNX1T1-220ENST00000519577 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.79■□□□□ 0.44
RUNX1T1-220ENST00000519577 ZNF467Q7Z7K2 595 aaPredicted RBP17.79■□□□□ 0.44
RUNX1T1-220ENST00000519577 FAM160B2Q86V87 743 aa17.79■□□□□ 0.44
RUNX1T1-220ENST00000519577 STAG1Q8WVM7 1258 aa17.79■□□□□ 0.44
RUNX1T1-220ENST00000519577 HELLSQ9NRZ9 838 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms