RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 PORCNQ9H237 461 aa8.89□□□□□ -0.99
SDCBP-206ENST00000519115 BTBD7Q9P203 1132 aa8.89□□□□□ -0.99
SDCBP-206ENST00000519115 SRRDQ9UH36 339 aa8.89□□□□□ -0.99
SDCBP-206ENST00000519115 CIZ1Q9ULV3 898 aaPredicted RBP8.89□□□□□ -0.99
SDCBP-206ENST00000519115 GABRQQ9UN88 632 aa8.89□□□□□ -0.99
SDCBP-206ENST00000519115 RABGAP1Q9Y3P9 1069 aa8.89□□□□□ -0.99
SDCBP-206ENST00000519115 PLXNA1Q9UIW2 1896 aa8.89□□□□□ -0.99
SDCBP-206ENST00000519115 CENPFP49454 3210 aa8.88□□□□□ -0.99
SDCBP-206ENST00000519115 CYP21A2P08686 494 aa8.88□□□□□ -0.99
SDCBP-206ENST00000519115 PRKAR2AP13861 404 aaKnown RBP8.88□□□□□ -0.99
SDCBP-206ENST00000519115 EXOSC10Q01780 885 aaKnown RBP8.88□□□□□ -0.99
SDCBP-206ENST00000519115 TRDNQ13061 729 aa8.88□□□□□ -0.99
SDCBP-206ENST00000519115 CUL4AQ13619 759 aa8.88□□□□□ -0.99
SDCBP-206ENST00000519115 PLS1Q14651 629 aa8.88□□□□□ -0.99
SDCBP-206ENST00000519115 COG2Q14746 738 aa8.88□□□□□ -0.99
SDCBP-206ENST00000519115 CCDC96Q2M329 555 aa8.88□□□□□ -0.99
SDCBP-206ENST00000519115 PPP4R3BQ5MIZ7 849 aa8.88□□□□□ -0.99
SDCBP-206ENST00000519115 SLFN13Q68D06 897 aa8.88□□□□□ -0.99
SDCBP-206ENST00000519115 RCSD1Q6JBY9 416 aa8.88□□□□□ -0.99
SDCBP-206ENST00000519115 BLOC1S2Q6QNY1 142 aa8.88□□□□□ -0.99
SDCBP-206ENST00000519115 LBX2Q6XYB7 198 aa8.88□□□□□ -0.99
SDCBP-206ENST00000519115 CCAR1Q8IX12 1150 aaKnown RBP8.88□□□□□ -0.99
SDCBP-206ENST00000519115 TMTC2Q8N394 836 aa8.88□□□□□ -0.99
SDCBP-206ENST00000519115 GMCL1P1Q8NEA9 526 aa8.88□□□□□ -0.99
SDCBP-206ENST00000519115 GTF3C2Q8WUA4 911 aaPredicted RBP8.88□□□□□ -0.99
SDCBP-206ENST00000519115 MKL1Q969V6 931 aa8.88□□□□□ -0.99
SDCBP-206ENST00000519115 COA7Q96BR5 231 aa8.88□□□□□ -0.99
SDCBP-206ENST00000519115 LIMCH1Q9UPQ0 1083 aa8.88□□□□□ -0.99
SDCBP-206ENST00000519115 RBBP6Q7Z6E9 1792 aaKnown RBP8.88□□□□□ -0.99
SDCBP-206ENST00000519115 BAZ2BQ9UIF8 2168 aaKnown RBP8.88□□□□□ -0.99
SDCBP-206ENST00000519115 ZNF236Q9UL36 1845 aa8.87□□□□□ -0.99
SDCBP-206ENST00000519115 MCM3APO60318 1980 aa8.87□□□□□ -0.99
SDCBP-206ENST00000519115 MYCP01106 439 aaPredicted RBP8.87□□□□□ -0.99
SDCBP-206ENST00000519115 GNRH1P01148 92 aa8.87□□□□□ -0.99
SDCBP-206ENST00000519115 TOP1P11387 765 aaKnown RBP8.87□□□□□ -0.99
SDCBP-206ENST00000519115 RPS6KB1P23443 525 aa8.87□□□□□ -0.99
SDCBP-206ENST00000519115 HOXD10P28358 340 aa8.87□□□□□ -0.99
SDCBP-206ENST00000519115 SLC1A4P43007 532 aa8.87□□□□□ -0.99
SDCBP-206ENST00000519115 FLT3LGP49771 235 aa8.87□□□□□ -0.99
SDCBP-206ENST00000519115 CCNA1P78396 465 aa8.87□□□□□ -0.99
SDCBP-206ENST00000519115 IKQ13123 557 aaPredicted RBP8.87□□□□□ -0.99
SDCBP-206ENST00000519115 PPP2R5BQ15173 497 aa8.87□□□□□ -0.99
SDCBP-206ENST00000519115 SLC9C1Q4G0N8 1177 aa8.87□□□□□ -0.99
SDCBP-206ENST00000519115 CCDC178Q5BJE1 867 aa8.87□□□□□ -0.99
SDCBP-206ENST00000519115 STOX1Q6ZVD7 989 aa8.87□□□□□ -0.99
SDCBP-206ENST00000519115 KCTD1Q719H9 257 aa8.87□□□□□ -0.99
SDCBP-206ENST00000519115 NCOA7Q8NI08 942 aa8.87□□□□□ -0.99
SDCBP-206ENST00000519115 RAET1EQ8TD07 263 aa8.87□□□□□ -0.99
SDCBP-206ENST00000519115 SH3TC2Q8TF17 1288 aa8.87□□□□□ -0.99
SDCBP-206ENST00000519115 KIFC2Q96AC6 838 aa8.87□□□□□ -0.99
SDCBP-206ENST00000519115 SLF1Q9BQI6 1058 aa8.87□□□□□ -0.99
SDCBP-206ENST00000519115 TMEM47Q9BQJ4 181 aa8.87□□□□□ -0.99
SDCBP-206ENST00000519115 KRT23Q9C075 422 aa8.87□□□□□ -0.99
SDCBP-206ENST00000519115 TCP11L1Q9NUJ3 509 aa8.87□□□□□ -0.99
SDCBP-206ENST00000519115 HOXC10Q9NYD6 342 aa8.87□□□□□ -0.99
SDCBP-206ENST00000519115 ZSWIM5Q9P217 1185 aa8.87□□□□□ -0.99
SDCBP-206ENST00000519115 PPP1R9AQ9ULJ8 1098 aa8.87□□□□□ -0.99
SDCBP-206ENST00000519115 SYNPO2Q9UMS6 1093 aa8.87□□□□□ -0.99
SDCBP-206ENST00000519115 TNKSO95271 1327 aa8.86□□□□□ -0.99
SDCBP-206ENST00000519115 FRMPD2Q68DX3 1309 aaPredicted RBP8.86□□□□□ -0.99
SDCBP-206ENST00000519115 TMEM232C9JQI7 657 aa8.86□□□□□ -0.99
SDCBP-206ENST00000519115 E7EWF7 191 aa8.86□□□□□ -0.99
SDCBP-206ENST00000519115 VWA5AO00534 786 aa8.86□□□□□ -0.99
SDCBP-206ENST00000519115 BMP3P12645 472 aa8.86□□□□□ -0.99
SDCBP-206ENST00000519115 ELNP15502 786 aa8.86□□□□□ -0.99
SDCBP-206ENST00000519115 CASTP20810 708 aaKnown RBP8.86□□□□□ -0.99
SDCBP-206ENST00000519115 MAPK4P31152 587 aa8.86□□□□□ -0.99
SDCBP-206ENST00000519115 MCM5P33992 734 aa8.86□□□□□ -0.99
SDCBP-206ENST00000519115 LIFRP42702 1097 aa8.86□□□□□ -0.99
SDCBP-206ENST00000519115 NOVP48745 357 aa8.86□□□□□ -0.99
SDCBP-206ENST00000519115 RCAN1P53805 252 aa8.86□□□□□ -0.99
SDCBP-206ENST00000519115 PRMT2P55345 433 aa8.86□□□□□ -0.99
SDCBP-206ENST00000519115 SOX10P56693 466 aa8.86□□□□□ -0.99
SDCBP-206ENST00000519115 TMEM132BQ14DG7 1078 aa8.86□□□□□ -0.99
SDCBP-206ENST00000519115 CYB5R4Q7L1T6 521 aa8.86□□□□□ -0.99
SDCBP-206ENST00000519115 GPR142Q7Z601 462 aa8.86□□□□□ -0.99
SDCBP-206ENST00000519115 RALYLQ86SE5 291 aaKnown RBP8.86□□□□□ -0.99
SDCBP-206ENST00000519115 IQCA1Q86XH1 822 aa8.86□□□□□ -0.99
SDCBP-206ENST00000519115 MB21D1Q8N884 522 aa8.86□□□□□ -0.99
SDCBP-206ENST00000519115 ENAHQ8N8S7 591 aaPredicted RBP8.86□□□□□ -0.99
SDCBP-206ENST00000519115 ZNF274Q96GC6 653 aaPredicted RBP8.86□□□□□ -0.99
SDCBP-206ENST00000519115 GMCL1Q96IK5 515 aa8.86□□□□□ -0.99
SDCBP-206ENST00000519115 TMEM87BQ96K49 555 aa8.86□□□□□ -0.99
SDCBP-206ENST00000519115 JAKMIP1Q96N16 626 aaKnown RBP8.86□□□□□ -0.99
SDCBP-206ENST00000519115 UBAC1Q9BSL1 405 aa8.86□□□□□ -0.99
SDCBP-206ENST00000519115 MOV10L1Q9BXT6 1211 aaKnown RBP8.86□□□□□ -0.99
SDCBP-206ENST00000519115 SPATC1LQ9H0A9 340 aa8.86□□□□□ -0.99
SDCBP-206ENST00000519115 PDRG1Q9NUG6 133 aa8.86□□□□□ -0.99
SDCBP-206ENST00000519115 ADCY3O60266 1144 aa8.85□□□□□ -0.99
SDCBP-206ENST00000519115 ERCC3P19447 782 aa8.85□□□□□ -0.99
SDCBP-206ENST00000519115 GRK4P32298 578 aa8.85□□□□□ -0.99
SDCBP-206ENST00000519115 SLC4A3P48751 1232 aa8.85□□□□□ -0.99
SDCBP-206ENST00000519115 STAT2P52630 851 aa8.85□□□□□ -0.99
SDCBP-206ENST00000519115 SNAP25P60880 206 aa8.85□□□□□ -0.99
SDCBP-206ENST00000519115 COL9A3Q14050 684 aaPredicted RBP8.85□□□□□ -0.99
SDCBP-206ENST00000519115 TTBK2Q6IQ55 1244 aa8.85□□□□□ -0.99
SDCBP-206ENST00000519115 CHST3Q7LGC8 479 aa8.85□□□□□ -0.99
SDCBP-206ENST00000519115 PLEKHH3Q7Z736 793 aa8.85□□□□□ -0.99
SDCBP-206ENST00000519115 NCAPG2Q86XI2 1143 aa8.85□□□□□ -0.99
SDCBP-206ENST00000519115 CPXCR1Q8N123 301 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms