RNA–Protein interactions for RNA: ENST00000518951.6

TOP1MT-206, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 5

Gene TOP1MT, Length 1,461 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-206ENST00000518951 NBPF11Q86T75 865 aa24.47■■□□□ 1.51
TOP1MT-206ENST00000518951 PRPF38AQ8NAV1 312 aaKnown RBP24.47■■□□□ 1.51
TOP1MT-206ENST00000518951 CHURC1Q8WUH1 139 aa24.47■■□□□ 1.51
TOP1MT-206ENST00000518951 KIFC2Q96AC6 838 aa24.47■■□□□ 1.51
TOP1MT-206ENST00000518951 ZFYVE28Q9HCC9 887 aa24.47■■□□□ 1.51
TOP1MT-206ENST00000518951 FAM217BQ9NTX9 383 aaPredicted RBP24.47■■□□□ 1.51
TOP1MT-206ENST00000518951 HOXC10Q9NYD6 342 aa24.47■■□□□ 1.51
TOP1MT-206ENST00000518951 ADAMTS5Q9UNA0 930 aa24.47■■□□□ 1.51
TOP1MT-206ENST00000518951 MYPNQ86TC9 1320 aa24.46■■□□□ 1.51
TOP1MT-206ENST00000518951 GOLGA8BA8MQT2 603 aa24.46■■□□□ 1.51
TOP1MT-206ENST00000518951 KLRF2D3W0D1 207 aa24.46■■□□□ 1.51
TOP1MT-206ENST00000518951 CALM1P0DP23 149 aa24.46■■□□□ 1.51
TOP1MT-206ENST00000518951 CALM2P0DP24 149 aa24.46■■□□□ 1.51
TOP1MT-206ENST00000518951 CALM3P0DP25 149 aa24.46■■□□□ 1.51
TOP1MT-206ENST00000518951 IKQ13123 557 aaPredicted RBP24.46■■□□□ 1.51
TOP1MT-206ENST00000518951 FAM160B2Q86V87 743 aa24.46■■□□□ 1.51
TOP1MT-206ENST00000518951 ZNF274Q96GC6 653 aaPredicted RBP24.46■■□□□ 1.51
TOP1MT-206ENST00000518951 CFHR5Q9BXR6 569 aa24.46■■□□□ 1.51
TOP1MT-206ENST00000518951 RBPJLQ9UBG7 517 aa24.46■■□□□ 1.51
TOP1MT-206ENST00000518951 PRR12Q9ULL5 1215 aa24.46■■□□□ 1.51
TOP1MT-206ENST00000518951 GOLGA8AA7E2F4 631 aa24.45■■□□□ 1.51
TOP1MT-206ENST00000518951 TLR2O60603 784 aa24.45■■□□□ 1.51
TOP1MT-206ENST00000518951 CD2BP2O95400 341 aaKnown RBP24.45■■□□□ 1.51
TOP1MT-206ENST00000518951 CDC27P30260 824 aa24.45■■□□□ 1.51
TOP1MT-206ENST00000518951 ANKRD1Q15327 319 aa24.45■■□□□ 1.51
TOP1MT-206ENST00000518951 LBX2Q6XYB7 198 aa24.45■■□□□ 1.51
TOP1MT-206ENST00000518951 CTCFLQ8NI51 663 aaPredicted RBP24.45■■□□□ 1.51
TOP1MT-206ENST00000518951 SMCR8Q8TEV9 937 aaPredicted RBP24.45■■□□□ 1.51
TOP1MT-206ENST00000518951 TXNRD2Q9NNW7 524 aa24.45■■□□□ 1.51
TOP1MT-206ENST00000518951 CPA4Q9UI42 421 aa24.45■■□□□ 1.51
TOP1MT-206ENST00000518951 CNMDO75829 334 aa24.45■■□□□ 1.5
TOP1MT-206ENST00000518951 PLEKHA8P1O95397 391 aa24.45■■□□□ 1.5
TOP1MT-206ENST00000518951 LARGE1O95461 756 aa24.45■■□□□ 1.5
TOP1MT-206ENST00000518951 SNAP25P60880 206 aa24.45■■□□□ 1.5
TOP1MT-206ENST00000518951 SYDE2Q5VT97 1194 aa24.45■■□□□ 1.5
TOP1MT-206ENST00000518951 CMTR1Q8N1G2 835 aaKnown RBP24.45■■□□□ 1.5
TOP1MT-206ENST00000518951 BTBD7Q9P203 1132 aa24.45■■□□□ 1.5
TOP1MT-206ENST00000518951 TSKSQ9UJT2 592 aa24.45■■□□□ 1.5
TOP1MT-206ENST00000518951 SMCHD1A6NHR9 2005 aa24.44■■□□□ 1.5
TOP1MT-206ENST00000518951 NID2Q14112 1375 aa24.44■■□□□ 1.5
TOP1MT-206ENST00000518951 VWA5AO00534 786 aa24.44■■□□□ 1.5
TOP1MT-206ENST00000518951 ADD1P35611 737 aaKnown RBP24.44■■□□□ 1.5
TOP1MT-206ENST00000518951 METAP2P50579 478 aaKnown RBP eCLIP24.44■■□□□ 1.56e-8■□□□□ 10.7
TOP1MT-206ENST00000518951 RCAN1P53805 252 aa24.44■■□□□ 1.5
TOP1MT-206ENST00000518951 CCT2P78371 535 aaKnown RBP24.44■■□□□ 1.5
TOP1MT-206ENST00000518951 STK3Q13188 491 aa24.44■■□□□ 1.5
TOP1MT-206ENST00000518951 RTN1Q16799 776 aa24.44■■□□□ 1.5
TOP1MT-206ENST00000518951 C17orf99Q6UX52 265 aa24.44■■□□□ 1.5
TOP1MT-206ENST00000518951 REPS2Q8NFH8 660 aa24.44■■□□□ 1.5
TOP1MT-206ENST00000518951 SAGE1Q9NXZ1 904 aa24.44■■□□□ 1.5
TOP1MT-206ENST00000518951 MYH6P13533 1939 aa24.44■■□□□ 1.5
TOP1MT-206ENST00000518951 CYTH3O43739 400 aa24.43■■□□□ 1.5
TOP1MT-206ENST00000518951 BCRP11274 1271 aa24.43■■□□□ 1.5
TOP1MT-206ENST00000518951 KIF5BP33176 963 aa24.43■■□□□ 1.5
TOP1MT-206ENST00000518951 ME3Q16798 604 aa24.43■■□□□ 1.5
TOP1MT-206ENST00000518951 Q3C1V9 767 aa24.43■■□□□ 1.5
TOP1MT-206ENST00000518951 ADGRF4Q8IZF3 695 aa24.43■■□□□ 1.5
TOP1MT-206ENST00000518951 SRBD1Q8N5C6 995 aaKnown RBP24.43■■□□□ 1.5
TOP1MT-206ENST00000518951 ANKRD13CQ8N6S4 541 aa24.43■■□□□ 1.5
TOP1MT-206ENST00000518951 PAGR1Q9BTK6 254 aa24.43■■□□□ 1.5
TOP1MT-206ENST00000518951 NCOA5Q9HCD5 579 aaKnown RBP24.43■■□□□ 1.5
TOP1MT-206ENST00000518951 GCLCP48506 637 aaPredicted RBP24.42■■□□□ 1.5
TOP1MT-206ENST00000518951 TMTC3Q6ZXV5 915 aa24.42■■□□□ 1.5
TOP1MT-206ENST00000518951 BEGAINQ9BUH8 593 aa24.42■■□□□ 1.5
TOP1MT-206ENST00000518951 JMJD4Q9H9V9 463 aa24.42■■□□□ 1.5
TOP1MT-206ENST00000518951 SLC38A10Q9HBR0 1119 aa24.42■■□□□ 1.5
TOP1MT-206ENST00000518951 VAT1LQ9HCJ6 419 aa24.42■■□□□ 1.5
TOP1MT-206ENST00000518951 TMEM132BQ14DG7 1078 aa24.41■■□□□ 1.5
TOP1MT-206ENST00000518951 RIOX1Q9H6W3 641 aa24.41■■□□□ 1.5
TOP1MT-206ENST00000518951 RABGAP1Q9Y3P9 1069 aa24.41■■□□□ 1.5
TOP1MT-206ENST00000518951 ST18O60284 1047 aa24.4■■□□□ 1.5
TOP1MT-206ENST00000518951 PFKFB2O60825 505 aa24.4■■□□□ 1.5
TOP1MT-206ENST00000518951 FUT2Q10981 343 aa24.4■■□□□ 1.5
TOP1MT-206ENST00000518951 CCDC82Q8N4S0 544 aa24.4■■□□□ 1.5
TOP1MT-206ENST00000518951 RANBP17Q9H2T7 1088 aaKnown RBP24.4■■□□□ 1.5
TOP1MT-206ENST00000518951 RBM28Q9NW13 759 aaKnown RBP24.4■■□□□ 1.5
TOP1MT-206ENST00000518951 MORF4L1Q9UBU8 362 aa24.4■■□□□ 1.5
TOP1MT-206ENST00000518951 LIMCH1Q9UPQ0 1083 aa24.4■■□□□ 1.5
TOP1MT-206ENST00000518951 ZNF536O15090 1300 aa24.4■■□□□ 1.5
TOP1MT-206ENST00000518951 GNAQP50148 359 aa24.39■■□□□ 1.5
TOP1MT-206ENST00000518951 SCRN1Q12765 414 aa24.39■■□□□ 1.5
TOP1MT-206ENST00000518951 NECAB1Q8N987 351 aa24.39■■□□□ 1.5
TOP1MT-206ENST00000518951 GTF3C2Q8WUA4 911 aaPredicted RBP24.39■■□□□ 1.5
TOP1MT-206ENST00000518951 ZNF214Q9UL59 606 aaPredicted RBP24.39■■□□□ 1.5
TOP1MT-206ENST00000518951 ZSWIM8A7E2V4 1837 aa24.39■■□□□ 1.49
TOP1MT-206ENST00000518951 ZBED4O75132 1171 aa24.38■■□□□ 1.49
TOP1MT-206ENST00000518951 ERVK-9P63128 1117 aa24.38■■□□□ 1.49
TOP1MT-206ENST00000518951 ERVK-24P63145 666 aa24.38■■□□□ 1.49
TOP1MT-206ENST00000518951 NTRK3Q16288 839 aa24.38■■□□□ 1.49
TOP1MT-206ENST00000518951 FAM110CQ1W6H9 321 aa24.38■■□□□ 1.49
TOP1MT-206ENST00000518951 CCDC174Q6PII3 467 aa24.38■■□□□ 1.49
TOP1MT-206ENST00000518951 MB21D1Q8N884 522 aa24.38■■□□□ 1.49
TOP1MT-206ENST00000518951 MTMR8Q96EF0 704 aa24.38■■□□□ 1.49
TOP1MT-206ENST00000518951 SPZ1Q9BXG8 430 aa24.38■■□□□ 1.49
TOP1MT-206ENST00000518951 SLKQ9H2G2 1235 aaPredicted RBP24.38■■□□□ 1.49
TOP1MT-206ENST00000518951 RAVER2Q9HCJ3 691 aaKnown RBP24.38■■□□□ 1.49
TOP1MT-206ENST00000518951 DHX16O60231 1041 aaKnown RBP24.38■■□□□ 1.49
TOP1MT-206ENST00000518951 FDX1P10109 184 aa24.38■■□□□ 1.49
TOP1MT-206ENST00000518951 TAL1P17542 331 aaPredicted RBP24.38■■□□□ 1.49
TOP1MT-206ENST00000518951 SMARCA1P28370 1054 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms