RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 KLHL25Q9H0H3 589 aa3.26□□□□□ -1.89
SCARNA3-201ENST00000517097 SMG9Q9H0W8 520 aaKnown RBP3.26□□□□□ -1.89
SCARNA3-201ENST00000517097 SOX17Q9H6I2 414 aaPredicted RBP3.26□□□□□ -1.89
SCARNA3-201ENST00000517097 CRTAC1Q9NQ79 661 aa3.26□□□□□ -1.89
SCARNA3-201ENST00000517097 PNMA8BQ9ULN7 279 aaPredicted RBP3.26□□□□□ -1.89
SCARNA3-201ENST00000517097 APOBEC2Q9Y235 224 aaKnown RBP3.26□□□□□ -1.89
SCARNA3-201ENST00000517097 CSADQ9Y600 493 aa3.26□□□□□ -1.89
SCARNA3-201ENST00000517097 TCRBV16S1A1N1A0A5B0 115 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 PRAMEF27A3QJZ7 478 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 BLACEA4D250 179 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 H3BRJ5 948 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 H7C1W4 665 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 RGS13O14921 159 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 TBX3O15119 743 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 NPHP1O15259 732 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 MAFGO15525 162 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 DLX3O60479 287 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 UBOX5O94941 541 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 CTSBP07858 339 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 MYBL2P10244 700 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 PF4V1P10720 104 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 FGFR3P22607 806 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 CCND1P24385 295 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 GBP1P32455 592 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 ETF1P62495 437 aaKnown RBP3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 GBX1Q14549 363 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 NTRK3Q16288 839 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 MINDY4Q4G0A6 757 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 FAM83BQ5T0W9 1011 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 PIK3R6Q5UE93 754 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 DCAF15Q66K64 600 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 ERAP2Q6P179 960 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 ELMSAN1Q6PJG2 1045 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 LYPD4Q6UWN0 246 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 ADAT2Q7Z6V5 191 aaKnown RBP3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 MORC1Q86VD1 984 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 MCATQ8IVS2 390 aaKnown RBP3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 CCDC144CPQ8IYA2 1237 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 PHACTR4Q8IZ21 702 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 CBARPQ8N350 705 aaPredicted RBP3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 BVESQ8NE79 360 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 MYRIPQ8NFW9 859 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 ZNF837Q96EG3 531 aaPredicted RBP3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 WDR89Q96FK6 387 aaPredicted RBP3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 FUBP3Q96I24 572 aaKnown RBP eCLIP3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 WNK4Q96J92 1243 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 MAGEB10Q96LZ2 347 aaPredicted RBP3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 STRBPQ96SI9 672 aaKnown RBP3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 LPIN3Q9BQK8 851 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 CORO1BQ9BR76 489 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 NRSN2Q9GZP1 204 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 TCF7L1Q9HCS4 588 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 CASS4Q9NQ75 786 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 TJP2Q9UDY2 1190 aa3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 FBXO9Q9UK97 447 aaPredicted RBP3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 ATXN7L1Q9ULK2 861 aaPredicted RBP3.25□□□□□ -1.89
SCARNA3-201ENST00000517097 ANO9A1A5B4 782 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 B4E1Z4 1266 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 K7ESF4 209 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 GPR25O00155 361 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 APAF1O14727 1248 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 CLEC3AO75596 197 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 SNUPNO95149 360 aaKnown RBP3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 CYP11A1P05108 521 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 CELA2BP08218 269 aaPredicted RBP3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 PHKG2P15735 406 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 BDNFP23560 247 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 MAOBP27338 520 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 SERPINB3P29508 390 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 CDC25BP30305 580 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 CYP2C19P33261 490 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 IARSP41252 1262 aaKnown RBP3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 ADCYAP1R1P41586 468 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 YARSP54577 528 aaKnown RBP3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 IL2P60568 153 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 ERVK-21P61565 698 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 HNRNPUQ00839 825 aaKnown RBP eCLIP3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 CTBSQ01459 385 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 SRSF11Q05519 484 aaKnown RBP3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 RING1Q06587 406 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 LMOD3Q0VAK6 560 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 C19orf57Q0VDD7 668 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 PDE3AQ14432 1141 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 GRM3Q14832 879 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 SF1Q15637 639 aaKnown RBP3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 KIF4BQ2VIQ3 1234 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 INAVAQ3KP66 663 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 ANKRD39Q53RE8 183 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 COBLL1Q53SF7 1204 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 ZC3H12AQ5D1E8 599 aaKnown RBP3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 TMEM240Q5SV17 173 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 WDR78Q5VTH9 848 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 SLC6A19Q695T7 634 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 IQSEC1Q6DN90 963 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 GDF6Q6KF10 455 aaPredicted RBP3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 ZCCHC8Q6NZY4 707 aaKnown RBP3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 MAMDC2Q7Z304 686 aaPredicted RBP3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 SYT9Q86SS6 491 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 ANKLE2Q86XL3 938 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms