RNA–Protein interactions for RNA: ENST00000516986.1

RNU6-56P-201, Transcript of RNA, U6 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU6-56P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-56P-201ENST00000516986 TBC1D9Q6ZT07 1266 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 TOGARAM2Q6ZUX3 1019 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 FASTKD5Q7L8L6 764 aaKnown RBP3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 HS2ST1Q7LGA3 356 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 GALNT5Q7Z7M9 940 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 TMEM110Q86TL2 294 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 SPATA24Q86W54 205 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 RTKN2Q8IZC4 609 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 LSMEM1Q8N8F7 131 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 USP38Q8NB14 1042 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 KCT2Q8NC54 265 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 ARMC2Q8NEN0 867 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 ANKK1Q8NFD2 765 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 PRR7Q8TB68 274 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 NOC3LQ8WTT2 800 aaKnown RBP3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 ZNF606Q8WXB4 792 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 COL26A1Q96A83 441 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 GPRASP2Q96D09 838 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 KIF1BPQ96EK5 621 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 FAM161BQ96MY7 647 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 CAMKK2Q96RR4 588 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 ALG1Q9BT22 464 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 THUMPD2Q9BTF0 503 aaKnown RBP3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 FSD1Q9BTV5 496 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 TMUB1Q9BVT8 246 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 SARGQ9BW04 601 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 OSBPL10Q9BXB5 764 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 CAAP1Q9H8G2 361 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 SENP2Q9HC62 589 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 SMYD2Q9NRG4 433 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 ABCF3Q9NUQ8 709 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 TMEM260Q9NX78 707 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 OGFRQ9NZT2 677 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 ZNF624Q9P2J8 865 aaPredicted RBP3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 PPARGC1AQ9UBK2 798 aaKnown RBP3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 MTRF1LQ9UGC7 380 aaKnown RBP3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 HOOK1Q9UJC3 728 aaKnown RBP3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 SH3BGRL2Q9UJC5 107 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 GRID1Q9ULK0 1009 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 STRIP2Q9ULQ0 834 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 SATB2Q9UPW6 733 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 GIT1Q9Y2X7 761 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 ATP6V1DQ9Y5K8 247 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 SNCAIPQ9Y6H5 919 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 SLC4A7Q9Y6M7 1214 aa3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 V9GYY5 206 aaPredicted RBP3.23□□□□□ -1.89
RNU6-56P-201ENST00000516986 SPAG9O60271 1321 aaKnown RBP3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 hCG_1642624A0A1W2PR95 340 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 CLRN2A0PK11 232 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 CCDC85CA6NKD9 419 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 USP17L15C9J2P7 530 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 USP17L10C9JJH3 530 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 USP17L13C9JLJ4 530 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 USP17L12C9JPN9 530 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 TMEM232C9JQI7 657 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 USP17L11C9JVI0 530 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 USP17L21D6R901 530 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 USP17L18D6R9N7 530 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 USP17L22D6RA61 530 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 USP17L17D6RBQ6 530 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 USP17L19D6RCP7 530 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 USP17L20D6RJB6 530 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 F5H423 210 aaPredicted RBP3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 EBAG9O00559 213 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 DPYSL4O14531 572 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 ZSCAN9O15535 394 aaPredicted RBP3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 SULT1B1O43704 296 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 CYTH3O43739 400 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 MGEA5O60502 916 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 TSPAN1O60635 241 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 USO1O60763 962 aaKnown RBP3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 DKC1O60832 514 aaKnown RBP eCLIP3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 ADAMTS4O75173 837 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 ZNF254O75437 659 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 PALMO75781 387 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 CAPN15O75808 1086 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 PPP1R37O75864 691 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 USP1O94782 785 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 SNX4O95219 450 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 APBB3O95704 486 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 KRT1P04264 644 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 APOA4P06727 396 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 USP17L8P0C7I0 530 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 PECAM1P16284 738 aaPredicted RBP3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 MUTP22033 750 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 FECHP22830 423 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 ELF1P32519 619 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 MCM5P33992 734 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 CA8P35219 290 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 ADH7P40394 386 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 SKIV2L2P42285 1042 aaKnown RBP3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 MAPK8P45983 427 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 DGKGP49619 791 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 CCT8P50990 548 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 RCAN1P53805 252 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 RRP1P56182 461 aaKnown RBP3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 TUBA4AP68366 448 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 PLCB3Q01970 1234 aa3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 FKBP4Q02790 459 aaKnown RBP eCLIP3.22□□□□□ -1.89
RNU6-56P-201ENST00000516986 APOBRQ0VD83 1088 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms