RNA–Protein interactions for RNA: ENST00000516882.1

SCARNA18.2-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 84 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.2-201ENST00000516882 ABRAQ8N0Z2 381 aa8.4□□□□□ -1.06
SCARNA18.2-201ENST00000516882 CPXCR1Q8N123 301 aa8.4□□□□□ -1.06
SCARNA18.2-201ENST00000516882 STAG1Q8WVM7 1258 aa8.4□□□□□ -1.06
SCARNA18.2-201ENST00000516882 USP6NLQ92738 828 aa8.4□□□□□ -1.06
SCARNA18.2-201ENST00000516882 KIFC2Q96AC6 838 aa8.4□□□□□ -1.06
SCARNA18.2-201ENST00000516882 TTC14Q96N46 770 aa8.4□□□□□ -1.06
SCARNA18.2-201ENST00000516882 MMP19Q99542 508 aa8.4□□□□□ -1.06
SCARNA18.2-201ENST00000516882 HTATIP2Q9BUP3 242 aa8.4□□□□□ -1.06
SCARNA18.2-201ENST00000516882 TEX13BQ9BXU2 312 aa8.4□□□□□ -1.06
SCARNA18.2-201ENST00000516882 INCENPQ9NQS7 918 aa8.4□□□□□ -1.06
SCARNA18.2-201ENST00000516882 PAK6Q9NQU5 681 aaPredicted RBP8.4□□□□□ -1.06
SCARNA18.2-201ENST00000516882 MTMR7Q9Y216 660 aa8.4□□□□□ -1.06
SCARNA18.2-201ENST00000516882 ALPK3Q96L96 1907 aa8.4□□□□□ -1.06
SCARNA18.2-201ENST00000516882 TMEM232C9JQI7 657 aa8.39□□□□□ -1.07
SCARNA18.2-201ENST00000516882 NMT2O60551 498 aa8.39□□□□□ -1.07
SCARNA18.2-201ENST00000516882 MSCO60682 206 aa8.39□□□□□ -1.07
SCARNA18.2-201ENST00000516882 HOXC6P09630 235 aa8.39□□□□□ -1.07
SCARNA18.2-201ENST00000516882 TOP1P11387 765 aaKnown RBP8.39□□□□□ -1.07
SCARNA18.2-201ENST00000516882 GSPT1P15170 499 aaKnown RBP8.39□□□□□ -1.07
SCARNA18.2-201ENST00000516882 MCCP23508 829 aa8.39□□□□□ -1.07
SCARNA18.2-201ENST00000516882 CNGA1P29973 690 aa8.39□□□□□ -1.07
SCARNA18.2-201ENST00000516882 CACNB2Q08289 660 aaPredicted RBP8.39□□□□□ -1.07
SCARNA18.2-201ENST00000516882 TRDNQ13061 729 aa8.39□□□□□ -1.07
SCARNA18.2-201ENST00000516882 CCL14Q16627 93 aa8.39□□□□□ -1.07
SCARNA18.2-201ENST00000516882 CCDC96Q2M329 555 aa8.39□□□□□ -1.07
SCARNA18.2-201ENST00000516882 SNRNP48Q6IEG0 339 aaKnown RBP8.39□□□□□ -1.07
SCARNA18.2-201ENST00000516882 RCSD1Q6JBY9 416 aa8.39□□□□□ -1.07
SCARNA18.2-201ENST00000516882 KIAA1211Q6ZU35 1233 aa8.39□□□□□ -1.07
SCARNA18.2-201ENST00000516882 ANKLE1Q8NAG6 615 aa8.39□□□□□ -1.07
SCARNA18.2-201ENST00000516882 DCAF4Q8WV16 495 aa8.39□□□□□ -1.07
SCARNA18.2-201ENST00000516882 DPF3Q92784 378 aa8.39□□□□□ -1.07
SCARNA18.2-201ENST00000516882 DDX11Q96FC9 970 aa8.39□□□□□ -1.07
SCARNA18.2-201ENST00000516882 GMCL1Q96IK5 515 aa8.39□□□□□ -1.07
SCARNA18.2-201ENST00000516882 CCDC136Q96JN2 1154 aa8.39□□□□□ -1.07
SCARNA18.2-201ENST00000516882 KRT23Q9C075 422 aa8.39□□□□□ -1.07
SCARNA18.2-201ENST00000516882 CNNM2Q9H8M5 875 aa8.39□□□□□ -1.07
SCARNA18.2-201ENST00000516882 IL17RBQ9NRM6 502 aa8.39□□□□□ -1.07
SCARNA18.2-201ENST00000516882 TCP11L1Q9NUJ3 509 aa8.39□□□□□ -1.07
SCARNA18.2-201ENST00000516882 FBXO40Q9UH90 709 aa8.39□□□□□ -1.07
SCARNA18.2-201ENST00000516882 PLA2G6O60733 806 aa8.38□□□□□ -1.07
SCARNA18.2-201ENST00000516882 OAZ1P54368 228 aa8.38□□□□□ -1.07
SCARNA18.2-201ENST00000516882 TRIM32Q13049 653 aa8.38□□□□□ -1.07
SCARNA18.2-201ENST00000516882 MAP3K21Q5TCX8 1036 aa8.38□□□□□ -1.07
SCARNA18.2-201ENST00000516882 PRPF38BQ5VTL8 546 aaKnown RBP8.38□□□□□ -1.07
SCARNA18.2-201ENST00000516882 OLFML2BQ68BL8 750 aa8.38□□□□□ -1.07
SCARNA18.2-201ENST00000516882 NPLOC4Q8TAT6 608 aa8.38□□□□□ -1.07
SCARNA18.2-201ENST00000516882 CHMP4CQ96CF2 233 aa8.38□□□□□ -1.07
SCARNA18.2-201ENST00000516882 SHISA4Q96DD7 197 aa8.38□□□□□ -1.07
SCARNA18.2-201ENST00000516882 UBAC1Q9BSL1 405 aa8.38□□□□□ -1.07
SCARNA18.2-201ENST00000516882 SLC38A10Q9HBR0 1119 aa8.38□□□□□ -1.07
SCARNA18.2-201ENST00000516882 ZNF214Q9UL59 606 aaPredicted RBP8.38□□□□□ -1.07
SCARNA18.2-201ENST00000516882 U3KPZ7 1027 aaPredicted RBP8.38□□□□□ -1.07
SCARNA18.2-201ENST00000516882 MYH7BA7E2Y1 1941 aa8.37□□□□□ -1.07
SCARNA18.2-201ENST00000516882 B4E1Z4 1266 aa8.37□□□□□ -1.07
SCARNA18.2-201ENST00000516882 ATP2A1O14983 1001 aa8.37□□□□□ -1.07
SCARNA18.2-201ENST00000516882 KDM4AO75164 1064 aa8.37□□□□□ -1.07
SCARNA18.2-201ENST00000516882 CHMLP26374 656 aa8.37□□□□□ -1.07
SCARNA18.2-201ENST00000516882 CASC1Q6TDU7 716 aa8.37□□□□□ -1.07
SCARNA18.2-201ENST00000516882 KCTD1Q719H9 257 aa8.37□□□□□ -1.07
SCARNA18.2-201ENST00000516882 NECAB2Q7Z6G3 386 aa8.37□□□□□ -1.07
SCARNA18.2-201ENST00000516882 DGKHQ86XP1 1220 aa8.37□□□□□ -1.07
SCARNA18.2-201ENST00000516882 TBC1D10CQ8IV04 446 aa8.37□□□□□ -1.07
SCARNA18.2-201ENST00000516882 ANKRD35Q8N283 1001 aa8.37□□□□□ -1.07
SCARNA18.2-201ENST00000516882 CHST13Q8NET6 341 aa8.37□□□□□ -1.07
SCARNA18.2-201ENST00000516882 REPS2Q8NFH8 660 aa8.37□□□□□ -1.07
SCARNA18.2-201ENST00000516882 TMEM47Q9BQJ4 181 aa8.37□□□□□ -1.07
SCARNA18.2-201ENST00000516882 CRISPLD2Q9H0B8 497 aa8.37□□□□□ -1.07
SCARNA18.2-201ENST00000516882 KAT14Q9H8E8 782 aa8.37□□□□□ -1.07
SCARNA18.2-201ENST00000516882 RAVER2Q9HCJ3 691 aaKnown RBP8.37□□□□□ -1.07
SCARNA18.2-201ENST00000516882 PNMA2Q9UL42 364 aa8.37□□□□□ -1.07
SCARNA18.2-201ENST00000516882 DIS3Q9Y2L1 958 aaKnown RBP8.37□□□□□ -1.07
SCARNA18.2-201ENST00000516882 NEDD4P46934 1319 aa8.36□□□□□ -1.07
SCARNA18.2-201ENST00000516882 ERICH2A1L162 156 aa8.36□□□□□ -1.07
SCARNA18.2-201ENST00000516882 COBLO75128 1261 aa8.36□□□□□ -1.07
SCARNA18.2-201ENST00000516882 CCND3P30281 292 aaPredicted RBP8.36□□□□□ -1.07
SCARNA18.2-201ENST00000516882 CYP2C19P33261 490 aa8.36□□□□□ -1.07
SCARNA18.2-201ENST00000516882 NOVP48745 357 aa8.36□□□□□ -1.07
SCARNA18.2-201ENST00000516882 SART3Q15020 963 aaKnown RBP8.36□□□□□ -1.07
SCARNA18.2-201ENST00000516882 TKFCQ3LXA3 575 aa8.36□□□□□ -1.07
SCARNA18.2-201ENST00000516882 GPATCH4Q5T3I0 446 aaKnown RBP8.36□□□□□ -1.07
SCARNA18.2-201ENST00000516882 CCDC174Q6PII3 467 aa8.36□□□□□ -1.07
SCARNA18.2-201ENST00000516882 RALYLQ86SE5 291 aaKnown RBP8.36□□□□□ -1.07
SCARNA18.2-201ENST00000516882 MSL3Q8N5Y2 521 aaKnown RBP8.36□□□□□ -1.07
SCARNA18.2-201ENST00000516882 PAWRQ96IZ0 340 aaKnown RBP8.36□□□□□ -1.07
SCARNA18.2-201ENST00000516882 MAML3Q96JK9 1138 aa8.36□□□□□ -1.07
SCARNA18.2-201ENST00000516882 ZKSCAN3Q9BRR0 538 aa8.36□□□□□ -1.07
SCARNA18.2-201ENST00000516882 NBPF3Q9H094 633 aa8.36□□□□□ -1.07
SCARNA18.2-201ENST00000516882 ACAD9Q9H845 621 aa8.36□□□□□ -1.07
SCARNA18.2-201ENST00000516882 HOMER2Q9NSB8 354 aa8.36□□□□□ -1.07
SCARNA18.2-201ENST00000516882 FLRT1Q9NZU1 646 aa8.36□□□□□ -1.07
SCARNA18.2-201ENST00000516882 DDX20Q9UHI6 824 aaKnown RBP8.36□□□□□ -1.07
SCARNA18.2-201ENST00000516882 OGDHLQ9ULD0 1010 aa8.36□□□□□ -1.07
SCARNA18.2-201ENST00000516882 PRR12Q9ULL5 1215 aa8.36□□□□□ -1.07
SCARNA18.2-201ENST00000516882 CNPY2Q9Y2B0 182 aa8.36□□□□□ -1.07
SCARNA18.2-201ENST00000516882 NR2E3Q9Y5X4 410 aa8.36□□□□□ -1.07
SCARNA18.2-201ENST00000516882 TACC3Q9Y6A5 838 aa8.36□□□□□ -1.07
SCARNA18.2-201ENST00000516882 KIAA1217Q5T5P2 1943 aa8.36□□□□□ -1.07
SCARNA18.2-201ENST00000516882 PFASO15067 1338 aa8.35□□□□□ -1.07
SCARNA18.2-201ENST00000516882 FRMPD2Q68DX3 1309 aaPredicted RBP8.35□□□□□ -1.07
SCARNA18.2-201ENST00000516882 LCTP09848 1927 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms