RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 KIFC2Q96AC6 838 aa20.74■□□□□ 0.91
DDX41-217ENST00000515562 A0A0D9SFI3 127 aa20.73■□□□□ 0.91
DDX41-217ENST00000515562 PGK2P07205 417 aa20.73■□□□□ 0.91
DDX41-217ENST00000515562 BMP3P12645 472 aa20.73■□□□□ 0.91
DDX41-217ENST00000515562 OAZ1P54368 228 aa20.73■□□□□ 0.91
DDX41-217ENST00000515562 ARRDC4Q8NCT1 418 aa20.73■□□□□ 0.91
DDX41-217ENST00000515562 GMCL1Q96IK5 515 aa20.73■□□□□ 0.91
DDX41-217ENST00000515562 FAM227BQ96M60 508 aa20.73■□□□□ 0.91
DDX41-217ENST00000515562 SLC38A10Q9HBR0 1119 aa20.73■□□□□ 0.91
DDX41-217ENST00000515562 ZMYND8Q9ULU4 1186 aaPredicted RBP20.73■□□□□ 0.91
DDX41-217ENST00000515562 STX8Q9UNK0 236 aa20.73■□□□□ 0.91
DDX41-217ENST00000515562 ZMYM6O95789 1325 aa20.73■□□□□ 0.91
DDX41-217ENST00000515562 TRIM6-TRIM34B2RNG4 842 aa20.72■□□□□ 0.91
DDX41-217ENST00000515562 FDX1P10109 184 aa20.72■□□□□ 0.91
DDX41-217ENST00000515562 STAT2P52630 851 aa20.72■□□□□ 0.91
DDX41-217ENST00000515562 CTDSPL2Q05D32 466 aa20.72■□□□□ 0.91
DDX41-217ENST00000515562 LRRC26Q2I0M4 334 aa20.72■□□□□ 0.91
DDX41-217ENST00000515562 ZNF792Q3KQV3 632 aa20.72■□□□□ 0.91
DDX41-217ENST00000515562 B4GALNT3Q6L9W6 998 aa20.72■□□□□ 0.91
DDX41-217ENST00000515562 CHD1LQ86WJ1 897 aa20.72■□□□□ 0.91
DDX41-217ENST00000515562 TINF2Q9BSI4 451 aa20.72■□□□□ 0.91
DDX41-217ENST00000515562 SENP6Q9GZR1 1112 aaPredicted RBP20.72■□□□□ 0.91
DDX41-217ENST00000515562 KBTBD13C9JR72 458 aa20.71■□□□□ 0.91
DDX41-217ENST00000515562 ORC4O43929 436 aa20.71■□□□□ 0.91
DDX41-217ENST00000515562 SLC1A4P43007 532 aa20.71■□□□□ 0.91
DDX41-217ENST00000515562 NUCB1Q02818 461 aa20.71■□□□□ 0.91
DDX41-217ENST00000515562 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.71■□□□□ 0.91
DDX41-217ENST00000515562 FAM160B2Q86V87 743 aa20.71■□□□□ 0.91
DDX41-217ENST00000515562 CPXCR1Q8N123 301 aa20.71■□□□□ 0.91
DDX41-217ENST00000515562 MSL3Q8N5Y2 521 aaKnown RBP20.71■□□□□ 0.91
DDX41-217ENST00000515562 GDF15Q99988 308 aa20.71■□□□□ 0.91
DDX41-217ENST00000515562 FBXO40Q9UH90 709 aa20.71■□□□□ 0.91
DDX41-217ENST00000515562 ISY1Q9ULR0 285 aaKnown RBP20.71■□□□□ 0.91
DDX41-217ENST00000515562 RANBP6O60518 1105 aaKnown RBP20.7■□□□□ 0.9
DDX41-217ENST00000515562 SYN1P17600 705 aa20.7■□□□□ 0.9
DDX41-217ENST00000515562 BMP8BP34820 402 aa20.7■□□□□ 0.9
DDX41-217ENST00000515562 NMIQ13287 307 aaPredicted RBP20.7■□□□□ 0.9
DDX41-217ENST00000515562 EXOC6Q8TAG9 804 aa20.7■□□□□ 0.9
DDX41-217ENST00000515562 CHURC1Q8WUH1 139 aa20.7■□□□□ 0.9
DDX41-217ENST00000515562 RILPL2Q969X0 211 aa20.7■□□□□ 0.9
DDX41-217ENST00000515562 DDX11Q96FC9 970 aa20.7■□□□□ 0.9
DDX41-217ENST00000515562 OSBPL3Q9H4L5 887 aa20.7■□□□□ 0.9
DDX41-217ENST00000515562 CNPY2Q9Y2B0 182 aa20.7■□□□□ 0.9
DDX41-217ENST00000515562 RIPK3Q9Y572 518 aa20.7■□□□□ 0.9
DDX41-217ENST00000515562 CCDC171Q6TFL3 1326 aa20.7■□□□□ 0.9
DDX41-217ENST00000515562 TMEM232C9JQI7 657 aa20.69■□□□□ 0.9
DDX41-217ENST00000515562 IGHDP01880 384 aa20.69■□□□□ 0.9
DDX41-217ENST00000515562 FGRP09769 529 aa20.69■□□□□ 0.9
DDX41-217ENST00000515562 HSPD1P10809 573 aaKnown RBP20.69■□□□□ 0.9
DDX41-217ENST00000515562 MFAP1P55081 439 aaKnown RBP20.69■□□□□ 0.9
DDX41-217ENST00000515562 IKQ13123 557 aaPredicted RBP20.69■□□□□ 0.9
DDX41-217ENST00000515562 PRAMEF19Q5SWL8 479 aa20.69■□□□□ 0.9
DDX41-217ENST00000515562 GJC2Q5T442 439 aaPredicted RBP20.69■□□□□ 0.9
DDX41-217ENST00000515562 CHST13Q8NET6 341 aa20.69■□□□□ 0.9
DDX41-217ENST00000515562 RAVER2Q9HCJ3 691 aaKnown RBP20.69■□□□□ 0.9
DDX41-217ENST00000515562 SYNGAP1Q96PV0 1343 aa20.69■□□□□ 0.9
DDX41-217ENST00000515562 DNAJC25-GNG10A0A024R161 153 aa20.68■□□□□ 0.9
DDX41-217ENST00000515562 FGAP02671 866 aa20.68■□□□□ 0.9
DDX41-217ENST00000515562 RARBP10826 455 aa20.68■□□□□ 0.9
DDX41-217ENST00000515562 MAGEA10P43363 369 aaPredicted RBP20.68■□□□□ 0.9
DDX41-217ENST00000515562 SLC4A3P48751 1232 aa20.68■□□□□ 0.9
DDX41-217ENST00000515562 ANO1Q5XXA6 986 aa20.68■□□□□ 0.9
DDX41-217ENST00000515562 ZNF589Q86UQ0 364 aaPredicted RBP20.68■□□□□ 0.9
DDX41-217ENST00000515562 PLEKHM2Q8IWE5 1019 aa20.68■□□□□ 0.9
DDX41-217ENST00000515562 STAG1Q8WVM7 1258 aa20.68■□□□□ 0.9
DDX41-217ENST00000515562 IL17RBQ9NRM6 502 aa20.68■□□□□ 0.9
DDX41-217ENST00000515562 NMT2O60551 498 aa20.67■□□□□ 0.9
DDX41-217ENST00000515562 PLA2G6O60733 806 aa20.67■□□□□ 0.9
DDX41-217ENST00000515562 PCP11498 1178 aaKnown RBP20.67■□□□□ 0.9
DDX41-217ENST00000515562 AKR1A1P14550 325 aa20.67■□□□□ 0.9
DDX41-217ENST00000515562 MCCP23508 829 aa20.67■□□□□ 0.9
DDX41-217ENST00000515562 NOVP48745 357 aa20.67■□□□□ 0.9
DDX41-217ENST00000515562 ZNF467Q7Z7K2 595 aaPredicted RBP20.67■□□□□ 0.9
DDX41-217ENST00000515562 ANKRD35Q8N283 1001 aa20.67■□□□□ 0.9
DDX41-217ENST00000515562 XPNPEP3Q9NQH7 507 aa20.67■□□□□ 0.9
DDX41-217ENST00000515562 INCENPQ9NQS7 918 aa20.67■□□□□ 0.9
DDX41-217ENST00000515562 TOMM22Q9NS69 142 aa20.67■□□□□ 0.9
DDX41-217ENST00000515562 MYCNP04198 464 aaPredicted RBP20.66■□□□□ 0.9
DDX41-217ENST00000515562 SDSP20132 328 aa20.66■□□□□ 0.9
DDX41-217ENST00000515562 ATN1P54259 1190 aaPredicted RBP20.66■□□□□ 0.9
DDX41-217ENST00000515562 LRRC41Q15345 812 aa20.66■□□□□ 0.9
DDX41-217ENST00000515562 MAMDC4Q6UXC1 1216 aa20.66■□□□□ 0.9
DDX41-217ENST00000515562 TACC3Q9Y6A5 838 aa20.66■□□□□ 0.9
DDX41-217ENST00000515562 ZNF865P0CJ78 1059 aaPredicted RBP20.65■□□□□ 0.9
DDX41-217ENST00000515562 RRP12Q5JTH9 1297 aaKnown RBP20.65■□□□□ 0.9
DDX41-217ENST00000515562 RCSD1Q6JBY9 416 aa20.65■□□□□ 0.9
DDX41-217ENST00000515562 DCAF4Q8WV16 495 aa20.65■□□□□ 0.9
DDX41-217ENST00000515562 ACAD9Q9H845 621 aa20.65■□□□□ 0.9
DDX41-217ENST00000515562 LAMA4Q16363 1823 aa20.64■□□□□ 0.9
DDX41-217ENST00000515562 HIP1O00291 1037 aa20.64■□□□□ 0.89
DDX41-217ENST00000515562 TAL1P17542 331 aaPredicted RBP20.64■□□□□ 0.89
DDX41-217ENST00000515562 RTP1P59025 263 aa20.64■□□□□ 0.89
DDX41-217ENST00000515562 TKFCQ3LXA3 575 aa20.64■□□□□ 0.89
DDX41-217ENST00000515562 KCTD1Q719H9 257 aa20.64■□□□□ 0.89
DDX41-217ENST00000515562 RNF180Q86T96 592 aa20.64■□□□□ 0.89
DDX41-217ENST00000515562 UBE2OQ9C0C9 1292 aaKnown RBP20.64■□□□□ 0.89
DDX41-217ENST00000515562 RNF41Q9H4P4 317 aaPredicted RBP20.64■□□□□ 0.89
DDX41-217ENST00000515562 HOMER2Q9NSB8 354 aa20.64■□□□□ 0.89
DDX41-217ENST00000515562 DIAPH3Q9NSV4 1193 aa20.64■□□□□ 0.89
DDX41-217ENST00000515562 TCP11L1Q9NUJ3 509 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms