RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 PLXNB2O15031 1838 aa13.23□□□□□ -0.29
HTT-213ENST00000513806 hCG_1642624A0A1W2PR95 340 aa13.22□□□□□ -0.29
HTT-213ENST00000513806 PALM3A6NDB9 673 aaPredicted RBP13.22□□□□□ -0.29
HTT-213ENST00000513806 GOLGA8AA7E2F4 631 aa13.22□□□□□ -0.29
HTT-213ENST00000513806 ZBTB43O43298 467 aa13.22□□□□□ -0.29
HTT-213ENST00000513806 DSG3P32926 999 aa13.22□□□□□ -0.29
HTT-213ENST00000513806 SLC4A3P48751 1232 aa13.22□□□□□ -0.29
HTT-213ENST00000513806 CAP1Q01518 475 aa13.22□□□□□ -0.29
HTT-213ENST00000513806 PABPC4Q13310 644 aaKnown RBP eCLIP13.22□□□□□ -0.29
HTT-213ENST00000513806 COG2Q14746 738 aa13.22□□□□□ -0.29
HTT-213ENST00000513806 Q3C1V9 767 aa13.22□□□□□ -0.29
HTT-213ENST00000513806 SYDE2Q5VT97 1194 aa13.22□□□□□ -0.29
HTT-213ENST00000513806 OTUD7BQ6GQQ9 843 aa13.22□□□□□ -0.29
HTT-213ENST00000513806 CCDC174Q6PII3 467 aa13.22□□□□□ -0.29
HTT-213ENST00000513806 NECAB1Q8N987 351 aa13.22□□□□□ -0.29
HTT-213ENST00000513806 JMYQ8N9B5 988 aa13.22□□□□□ -0.29
HTT-213ENST00000513806 SMCR8Q8TEV9 937 aaPredicted RBP13.22□□□□□ -0.29
HTT-213ENST00000513806 PARK7Q99497 189 aaKnown RBP13.22□□□□□ -0.29
HTT-213ENST00000513806 MTA3Q9BTC8 594 aa13.22□□□□□ -0.29
HTT-213ENST00000513806 ZFYVE28Q9HCC9 887 aa13.22□□□□□ -0.29
HTT-213ENST00000513806 FAM217BQ9NTX9 383 aaPredicted RBP13.22□□□□□ -0.29
HTT-213ENST00000513806 PPP1R9AQ9ULJ8 1098 aa13.22□□□□□ -0.29
HTT-213ENST00000513806 PRR12Q9ULL5 1215 aa13.22□□□□□ -0.29
HTT-213ENST00000513806 SYNPO2Q9UMS6 1093 aa13.22□□□□□ -0.29
HTT-213ENST00000513806 KLRF2D3W0D1 207 aa13.21□□□□□ -0.29
HTT-213ENST00000513806 FOXN1O15353 648 aa13.21□□□□□ -0.29
HTT-213ENST00000513806 CA12O43570 354 aa13.21□□□□□ -0.29
HTT-213ENST00000513806 DDAH1O94760 285 aa13.21□□□□□ -0.29
HTT-213ENST00000513806 HSPA1AP0DMV8 641 aaKnown RBP13.21□□□□□ -0.29
HTT-213ENST00000513806 HSPA1BP0DMV9 641 aaKnown RBP13.21□□□□□ -0.29
HTT-213ENST00000513806 PDIA3P30101 505 aaKnown RBP13.21□□□□□ -0.29
HTT-213ENST00000513806 ADD1P35611 737 aaKnown RBP13.21□□□□□ -0.29
HTT-213ENST00000513806 STAT2P52630 851 aa13.21□□□□□ -0.29
HTT-213ENST00000513806 MAP2K1Q02750 393 aaPredicted RBP13.21□□□□□ -0.29
HTT-213ENST00000513806 RABEP1Q15276 862 aa13.21□□□□□ -0.29
HTT-213ENST00000513806 RTN1Q16799 776 aa13.21□□□□□ -0.29
HTT-213ENST00000513806 TMTC2Q8N394 836 aa13.21□□□□□ -0.29
HTT-213ENST00000513806 SRBD1Q8N5C6 995 aaKnown RBP13.21□□□□□ -0.29
HTT-213ENST00000513806 RBPJLQ9UBG7 517 aa13.21□□□□□ -0.29
HTT-213ENST00000513806 FEM1BQ9UK73 627 aa13.21□□□□□ -0.29
HTT-213ENST00000513806 PNMA3Q9UL41 463 aa13.21□□□□□ -0.29
HTT-213ENST00000513806 SLC45A1Q9Y2W3 748 aa13.21□□□□□ -0.29
HTT-213ENST00000513806 CYTH3O43739 400 aa13.2□□□□□ -0.3
HTT-213ENST00000513806 DHX16O60231 1041 aaKnown RBP13.2□□□□□ -0.3
HTT-213ENST00000513806 METAP2P50579 478 aaKnown RBP eCLIP13.2□□□□□ -0.3
HTT-213ENST00000513806 ST3GAL1Q11201 340 aa13.2□□□□□ -0.3
HTT-213ENST00000513806 PLS1Q14651 629 aa13.2□□□□□ -0.3
HTT-213ENST00000513806 TMEM132BQ14DG7 1078 aa13.2□□□□□ -0.3
HTT-213ENST00000513806 ME3Q16798 604 aa13.2□□□□□ -0.3
HTT-213ENST00000513806 ASPRV1Q53RT3 343 aa13.2□□□□□ -0.3
HTT-213ENST00000513806 C17orf99Q6UX52 265 aa13.2□□□□□ -0.3
HTT-213ENST00000513806 SYNE3Q6ZMZ3 975 aa13.2□□□□□ -0.3
HTT-213ENST00000513806 REM2Q8IYK8 340 aaPredicted RBP13.2□□□□□ -0.3
HTT-213ENST00000513806 ADGRF4Q8IZF3 695 aa13.2□□□□□ -0.3
HTT-213ENST00000513806 CPXCR1Q8N123 301 aa13.2□□□□□ -0.3
HTT-213ENST00000513806 FBXL16Q8N461 479 aa13.2□□□□□ -0.3
HTT-213ENST00000513806 FANCBQ8NB91 859 aa13.2□□□□□ -0.3
HTT-213ENST00000513806 REPS2Q8NFH8 660 aa13.2□□□□□ -0.3
HTT-213ENST00000513806 CTCFLQ8NI51 663 aaPredicted RBP13.2□□□□□ -0.3
HTT-213ENST00000513806 ARHGAP39Q9C0H5 1083 aa13.2□□□□□ -0.3
HTT-213ENST00000513806 RAVER2Q9HCJ3 691 aaKnown RBP13.2□□□□□ -0.3
HTT-213ENST00000513806 VWA5AO00534 786 aa13.19□□□□□ -0.3
HTT-213ENST00000513806 TLR2O60603 784 aa13.19□□□□□ -0.3
HTT-213ENST00000513806 ALDH1A1P00352 501 aa13.19□□□□□ -0.3
HTT-213ENST00000513806 BCRP11274 1271 aa13.19□□□□□ -0.3
HTT-213ENST00000513806 CTGFP29279 349 aa13.19□□□□□ -0.3
HTT-213ENST00000513806 SCRN1Q12765 414 aa13.19□□□□□ -0.3
HTT-213ENST00000513806 BTNL9Q6UXG8 535 aa13.19□□□□□ -0.3
HTT-213ENST00000513806 TMTC3Q6ZXV5 915 aa13.19□□□□□ -0.3
HTT-213ENST00000513806 FAM160B2Q86V87 743 aa13.19□□□□□ -0.3
HTT-213ENST00000513806 HOMER1Q86YM7 354 aa13.19□□□□□ -0.3
HTT-213ENST00000513806 PRPF38AQ8NAV1 312 aaKnown RBP13.19□□□□□ -0.3
HTT-213ENST00000513806 CHURC1Q8WUH1 139 aa13.19□□□□□ -0.3
HTT-213ENST00000513806 AGBL1Q96MI9 1066 aa13.19□□□□□ -0.3
HTT-213ENST00000513806 PIGSQ96S52 555 aa13.19□□□□□ -0.3
HTT-213ENST00000513806 BEGAINQ9BUH8 593 aa13.19□□□□□ -0.3
HTT-213ENST00000513806 ALDH8A1Q9H2A2 487 aaPredicted RBP13.19□□□□□ -0.3
HTT-213ENST00000513806 JMJD4Q9H9V9 463 aa13.19□□□□□ -0.3
HTT-213ENST00000513806 ZCCHC17Q9NP64 241 aaKnown RBP13.19□□□□□ -0.3
HTT-213ENST00000513806 LCTP09848 1927 aa13.19□□□□□ -0.3
HTT-213ENST00000513806 ZNF536O15090 1300 aa13.18□□□□□ -0.3
HTT-213ENST00000513806 RBBP6Q7Z6E9 1792 aaKnown RBP13.18□□□□□ -0.3
HTT-213ENST00000513806 HSPA8P11142 646 aaKnown RBP13.18□□□□□ -0.3
HTT-213ENST00000513806 EVCP57679 992 aa13.18□□□□□ -0.3
HTT-213ENST00000513806 ERVK-9P63128 1117 aa13.18□□□□□ -0.3
HTT-213ENST00000513806 ERVK-24P63145 666 aa13.18□□□□□ -0.3
HTT-213ENST00000513806 CDC37Q16543 378 aaPredicted RBP13.18□□□□□ -0.3
HTT-213ENST00000513806 GPATCH4Q5T3I0 446 aaKnown RBP13.18□□□□□ -0.3
HTT-213ENST00000513806 LBX2Q6XYB7 198 aa13.18□□□□□ -0.3
HTT-213ENST00000513806 PHKBQ93100 1093 aa13.18□□□□□ -0.3
HTT-213ENST00000513806 PORCNQ9H237 461 aa13.18□□□□□ -0.3
HTT-213ENST00000513806 SLC38A10Q9HBR0 1119 aa13.18□□□□□ -0.3
HTT-213ENST00000513806 HOMER2Q9NSB8 354 aa13.18□□□□□ -0.3
HTT-213ENST00000513806 HOXC10Q9NYD6 342 aa13.18□□□□□ -0.3
HTT-213ENST00000513806 ADAMTS5Q9UNA0 930 aa13.18□□□□□ -0.3
HTT-213ENST00000513806 RIPK3Q9Y572 518 aa13.18□□□□□ -0.3
HTT-213ENST00000513806 PLXNA1Q9UIW2 1896 aa13.18□□□□□ -0.3
HTT-213ENST00000513806 CNTNAP5Q8WYK1 1306 aa13.17□□□□□ -0.3
HTT-213ENST00000513806 GPR25O00155 361 aa13.17□□□□□ -0.3
HTT-213ENST00000513806 PLA2G6O60733 806 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms