RNA–Protein interactions for RNA: ENST00000513757.5

LPCAT1-205, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 4

Gene LPCAT1, Length 547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-205ENST00000513757 MROH7Q68CQ1 1323 aa11.73□□□□□ -0.53
LPCAT1-205ENST00000513757 CCDC174Q6PII3 467 aa11.73□□□□□ -0.53
LPCAT1-205ENST00000513757 MAMDC4Q6UXC1 1216 aa11.73□□□□□ -0.53
LPCAT1-205ENST00000513757 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.73□□□□□ -0.53
LPCAT1-205ENST00000513757 ZNF467Q7Z7K2 595 aaPredicted RBP11.73□□□□□ -0.53
LPCAT1-205ENST00000513757 SLF1Q9BQI6 1058 aa11.73□□□□□ -0.53
LPCAT1-205ENST00000513757 TBX21Q9UL17 535 aa11.73□□□□□ -0.53
LPCAT1-205ENST00000513757 SYNRGQ9UMZ2 1314 aa11.73□□□□□ -0.53
LPCAT1-205ENST00000513757 CDH23Q9H251 3354 aa11.72□□□□□ -0.53
LPCAT1-205ENST00000513757 DNAJC25-GNG10A0A024R161 153 aa11.72□□□□□ -0.53
LPCAT1-205ENST00000513757 SMIM22K7EJ46 135 aa11.72□□□□□ -0.53
LPCAT1-205ENST00000513757 ATP2A1O14983 1001 aa11.72□□□□□ -0.53
LPCAT1-205ENST00000513757 DUSP11O75319 330 aaKnown RBP11.72□□□□□ -0.53
LPCAT1-205ENST00000513757 TIMP1P01033 207 aa11.72□□□□□ -0.53
LPCAT1-205ENST00000513757 PPIGQ13427 754 aaKnown RBP eCLIP11.72□□□□□ -0.532e-11■■□□□ 12
LPCAT1-205ENST00000513757 GRIN2CQ14957 1233 aa11.72□□□□□ -0.53
LPCAT1-205ENST00000513757 TJAP1Q5JTD0 557 aa11.72□□□□□ -0.53
LPCAT1-205ENST00000513757 CCSAPQ6IQ19 270 aaPredicted RBP11.72□□□□□ -0.53
LPCAT1-205ENST00000513757 MFSD5Q6N075 450 aa11.72□□□□□ -0.53
LPCAT1-205ENST00000513757 ZSCAN25Q6NSZ9 544 aa11.72□□□□□ -0.53
LPCAT1-205ENST00000513757 PCSK9Q8NBP7 692 aaKnown RBP11.72□□□□□ -0.53
LPCAT1-205ENST00000513757 LENG1Q96BZ8 264 aaPredicted RBP11.72□□□□□ -0.53
LPCAT1-205ENST00000513757 DDX11Q96FC9 970 aa11.72□□□□□ -0.53
LPCAT1-205ENST00000513757 GLT1D1Q96MS3 346 aa11.72□□□□□ -0.53
LPCAT1-205ENST00000513757 HAUS7Q99871 368 aa11.72□□□□□ -0.53
LPCAT1-205ENST00000513757 BOLA2Q9H3K6 86 aa11.72□□□□□ -0.53
LPCAT1-205ENST00000513757 ARPP21Q9UBL0 812 aaPredicted RBP11.72□□□□□ -0.53
LPCAT1-205ENST00000513757 MCM3APO60318 1980 aa11.72□□□□□ -0.53
LPCAT1-205ENST00000513757 SPTBN5Q9NRC6 3674 aaKnown RBP11.72□□□□□ -0.53
LPCAT1-205ENST00000513757 EYSQ5T1H1 3165 aa11.71□□□□□ -0.53
LPCAT1-205ENST00000513757 APBB1O00213 710 aa11.71□□□□□ -0.53
LPCAT1-205ENST00000513757 SNAI1O95863 264 aaPredicted RBP11.71□□□□□ -0.53
LPCAT1-205ENST00000513757 CDK7P50613 346 aa11.71□□□□□ -0.53
LPCAT1-205ENST00000513757 KCNA10Q16322 511 aa11.71□□□□□ -0.53
LPCAT1-205ENST00000513757 SNRNP48Q6IEG0 339 aaKnown RBP11.71□□□□□ -0.53
LPCAT1-205ENST00000513757 CTR9Q6PD62 1173 aa11.71□□□□□ -0.53
LPCAT1-205ENST00000513757 PRPF38AQ8NAV1 312 aaKnown RBP11.71□□□□□ -0.53
LPCAT1-205ENST00000513757 PANK1Q8TE04 598 aa11.71□□□□□ -0.53
LPCAT1-205ENST00000513757 TIFAQ96CG3 184 aa11.71□□□□□ -0.53
LPCAT1-205ENST00000513757 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.71□□□□□ -0.531e-6■■■□□ 15.2
LPCAT1-205ENST00000513757 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.71□□□□□ -0.53
LPCAT1-205ENST00000513757 UPF3AQ9H1J1 476 aaKnown RBP11.71□□□□□ -0.53
LPCAT1-205ENST00000513757 ZNF576Q9H609 170 aa11.71□□□□□ -0.53
LPCAT1-205ENST00000513757 SPC25Q9HBM1 224 aa11.71□□□□□ -0.53
LPCAT1-205ENST00000513757 NYAP2Q9P242 653 aa11.71□□□□□ -0.53
LPCAT1-205ENST00000513757 ZHX1Q9UKY1 873 aaPredicted RBP11.71□□□□□ -0.53
LPCAT1-205ENST00000513757 SLC4A4Q9Y6R1 1079 aa11.71□□□□□ -0.53
LPCAT1-205ENST00000513757 BDP1A6H8Y1 2624 aa11.71□□□□□ -0.54
LPCAT1-205ENST00000513757 RAD21O60216 631 aa11.7□□□□□ -0.54
LPCAT1-205ENST00000513757 SLFNL1Q499Z3 407 aa11.7□□□□□ -0.54
LPCAT1-205ENST00000513757 SBK1Q52WX2 424 aa11.7□□□□□ -0.54
LPCAT1-205ENST00000513757 RASIP1Q5U651 963 aa11.7□□□□□ -0.54
LPCAT1-205ENST00000513757 GIMAP6Q6P9H5 292 aa11.7□□□□□ -0.54
LPCAT1-205ENST00000513757 ABHD16BQ9H3Z7 469 aa11.7□□□□□ -0.54
LPCAT1-205ENST00000513757 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.7□□□□□ -0.54
LPCAT1-205ENST00000513757 FBXO40Q9UH90 709 aa11.7□□□□□ -0.54
LPCAT1-205ENST00000513757 DDX19BQ9UMR2 479 aa11.7□□□□□ -0.54
LPCAT1-205ENST00000513757 SYNPO2Q9UMS6 1093 aa11.7□□□□□ -0.54
LPCAT1-205ENST00000513757 MYH4Q9Y623 1939 aa11.69□□□□□ -0.54
LPCAT1-205ENST00000513757 A0A0U1RQG5 324 aaPredicted RBP11.69□□□□□ -0.54
LPCAT1-205ENST00000513757 F5H6K3 240 aa11.69□□□□□ -0.54
LPCAT1-205ENST00000513757 TLR3O15455 904 aaKnown RBP11.69□□□□□ -0.54
LPCAT1-205ENST00000513757 ZBED4O75132 1171 aa11.69□□□□□ -0.54
LPCAT1-205ENST00000513757 NDUFB10O96000 172 aa11.69□□□□□ -0.54
LPCAT1-205ENST00000513757 C6orf222P0C671 652 aaPredicted RBP11.69□□□□□ -0.54
LPCAT1-205ENST00000513757 RASA1P20936 1047 aa11.69□□□□□ -0.54
LPCAT1-205ENST00000513757 OAZ1P54368 228 aa11.69□□□□□ -0.54
LPCAT1-205ENST00000513757 GJA9P57773 515 aa11.69□□□□□ -0.54
LPCAT1-205ENST00000513757 NKX3-2P78367 333 aa11.69□□□□□ -0.54
LPCAT1-205ENST00000513757 HNRNPUQ00839 825 aaKnown RBP eCLIP11.69□□□□□ -0.54
LPCAT1-205ENST00000513757 KLRC3Q07444 240 aa11.69□□□□□ -0.54
LPCAT1-205ENST00000513757 ACVR2BQ13705 512 aa11.69□□□□□ -0.54
LPCAT1-205ENST00000513757 TMEM240Q5SV17 173 aa11.69□□□□□ -0.54
LPCAT1-205ENST00000513757 AKNAD1Q5T1N1 836 aa11.69□□□□□ -0.54
LPCAT1-205ENST00000513757 PSRC1Q6PGN9 363 aaPredicted RBP11.69□□□□□ -0.54
LPCAT1-205ENST00000513757 SIRT2Q8IXJ6 389 aa11.69□□□□□ -0.54
LPCAT1-205ENST00000513757 TMEM199Q8N511 208 aa11.69□□□□□ -0.54
LPCAT1-205ENST00000513757 USP38Q8NB14 1042 aa11.69□□□□□ -0.54
LPCAT1-205ENST00000513757 CHST13Q8NET6 341 aa11.69□□□□□ -0.54
LPCAT1-205ENST00000513757 GAS2L1Q99501 681 aaPredicted RBP11.69□□□□□ -0.54
LPCAT1-205ENST00000513757 NUP88Q99567 741 aaPredicted RBP11.69□□□□□ -0.54
LPCAT1-205ENST00000513757 PUS7LQ9H0K6 701 aaKnown RBP11.69□□□□□ -0.54
LPCAT1-205ENST00000513757 RIPK3Q9Y572 518 aa11.69□□□□□ -0.54
LPCAT1-205ENST00000513757 CTDP1Q9Y5B0 961 aaPredicted RBP11.69□□□□□ -0.54
LPCAT1-205ENST00000513757 MYADML2A6NDP7 307 aa11.68□□□□□ -0.54
LPCAT1-205ENST00000513757 ARVCFO00192 962 aa11.68□□□□□ -0.54
LPCAT1-205ENST00000513757 ASGR1P07306 291 aa11.68□□□□□ -0.54
LPCAT1-205ENST00000513757 FDX1P10109 184 aa11.68□□□□□ -0.54
LPCAT1-205ENST00000513757 CCDC144BQ3MJ40 725 aa11.68□□□□□ -0.54
LPCAT1-205ENST00000513757 C16orf59Q7L2K0 433 aa11.68□□□□□ -0.54
LPCAT1-205ENST00000513757 FAM126BQ8IXS8 530 aa11.68□□□□□ -0.54
LPCAT1-205ENST00000513757 CPXCR1Q8N123 301 aa11.68□□□□□ -0.54
LPCAT1-205ENST00000513757 ANKRD35Q8N283 1001 aa11.68□□□□□ -0.54
LPCAT1-205ENST00000513757 ATXN2LQ8WWM7 1075 aaKnown RBP11.68□□□□□ -0.54
LPCAT1-205ENST00000513757 STRBPQ96SI9 672 aaKnown RBP11.68□□□□□ -0.54
LPCAT1-205ENST00000513757 PBX4Q9BYU1 374 aa11.68□□□□□ -0.54
LPCAT1-205ENST00000513757 CHMP4BQ9H444 224 aaKnown RBP11.68□□□□□ -0.54
LPCAT1-205ENST00000513757 MKNK2Q9HBH9 465 aa11.68□□□□□ -0.54
LPCAT1-205ENST00000513757 SLC38A10Q9HBR0 1119 aa11.68□□□□□ -0.54
LPCAT1-205ENST00000513757 ZBTB40Q9NUA8 1239 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms